Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K21
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    29   2.1  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    29   2.1  
AL021474-1|CAA16308.1|  343|Caenorhabditis elegans Hypothetical ...    28   4.9  
U29244-5|AAC71090.1|  378|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 346 WKYHRCLHVSCSCPPNALCSPSL 278
           WK  +C H+   CPP  LC P+L
Sbjct: 281 WKCAKCAHMGTPCPPCVLC-PAL 302


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 346 WKYHRCLHVSCSCPPNALCSPSL 278
           WK  +C H+   CPP  LC P+L
Sbjct: 322 WKCAKCAHMGTPCPPCVLC-PAL 343


>AL021474-1|CAA16308.1|  343|Caenorhabditis elegans Hypothetical
           protein Y32F6A.1 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/56 (21%), Positives = 29/56 (51%)
 Frame = -1

Query: 239 LVHNFKVRPLVPPMRDYFPRHSITLPFVFVTVRTSIAISVCTPFEFKSICISEIDK 72
           ++HN +++  +   R+      +TLP  + +  +S  I    P++  ++CI E ++
Sbjct: 275 VIHNQRMQLFISAQRNILMGEELTLPHDYDSNYSSKVIQCAHPYQPHNVCIHEKER 330


>U29244-5|AAC71090.1|  378|Caenorhabditis elegans Hypothetical
           protein ZK1248.9 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 225 EIVNKQFGQYLKLESNSDSDGEHKAFGGHEH 317
           E+ N+++ Q+L+L  N     E K FG  EH
Sbjct: 204 EVNNREYTQFLELALNQHCTRETKRFGCFEH 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,618,435
Number of Sequences: 27780
Number of extensions: 312119
Number of successful extensions: 998
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)