BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K21 (638 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo... 32 0.37 At5g44100.1 68418.m05396 casein kinase, putative similar to dual... 29 2.6 At1g28375.1 68414.m03486 expressed protein 29 2.6 At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual... 29 2.6 At5g39360.1 68418.m04768 circadian clock coupling factor-related... 29 3.4 At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein co... 29 3.4 At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 28 4.5 At5g11990.1 68418.m01402 proline-rich family protein contains pr... 28 6.0 At4g15093.1 68417.m02319 catalytic LigB subunit of aromatic ring... 28 6.0 At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.0 At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.0 At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.0 At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.0 At4g28540.1 68417.m04083 casein kinase, putative similar to case... 27 7.9 >At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein / heavy-metal-associated domain-containing protein contains InterPro accession IPR001757: ATPase, E1-E2 type; contains Pfam profiles PF00403: Heavy-metal-associated domain, PF00702: haloacid dehalogenase-like hydrolase Length = 883 Score = 31.9 bits (69), Expect = 0.37 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -3 Query: 372 PSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHC-RSLILVSNIVRIACSQFQSTPS 211 P S L + S V+ C R L+ + RHC R LVSN V I+ F+ST S Sbjct: 11 PPPSSLHIRPSKFLVNRCFPR-LRRSRIRRHCSRPFFLVSNSVEISTQSFESTES 64 >At5g44100.1 68418.m05396 casein kinase, putative similar to dual specificity kinase 1 gi|1216484|gb|AAB47968 Length = 476 Score = 29.1 bits (62), Expect = 2.6 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = -2 Query: 343 KYHRCLHVSCSCPPNALCSPSLSEFDSSFKYCPNCLF 233 KY R S P LC SEF S F YC + F Sbjct: 224 KYDRISEKKVSTPIEVLCKNQPSEFVSYFHYCRSLRF 260 >At1g28375.1 68414.m03486 expressed protein Length = 102 Score = 29.1 bits (62), Expect = 2.6 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = -3 Query: 315 VRVLQTLYVHRHCRSLILVSNIVRIACSQFQSTPSGSTNE 196 VRVL+ + +H S++L++ V + S + PS STN+ Sbjct: 4 VRVLEIMRLHVSNMSMVLITTFVIVIFSTVMARPSISTNK 43 >At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual specificity kinase 1 (ADK1) [Arabidopsis thaliana] gi|1216484|gb|AAB47968; supported by cDNA gi:18700076 and gi:1216483. Note: differences between cDNAs in the 11th exon, possibly due to errors or alternative splicing. Length = 471 Score = 29.1 bits (62), Expect = 2.6 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -2 Query: 343 KYHRCLHVSCSCPPNALCSPSLSEFDSSFKYCPNCLF 233 KY R + P LC SEF S F+YC + F Sbjct: 224 KYDRISEKKVATPIEVLCKNQPSEFVSYFRYCRSLRF 260 >At5g39360.1 68418.m04768 circadian clock coupling factor-related similar to circadian clock coupling factor ZGT [Nicotiana tabacum] GI:14210079 Length = 249 Score = 28.7 bits (61), Expect = 3.4 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = -2 Query: 343 KYHRCLH-VSCSCPPNALCSPSLSEFDSSFKYCPNCLFTISKYALWF 206 K +RC+H +C C L L + PN + T+S WF Sbjct: 5 KQYRCIHSATCHCTKGHLSEEVLFLMVQHLNWNPNVIATLSCVCKWF 51 >At5g03540.1 68418.m00310 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit Length = 638 Score = 28.7 bits (61), Expect = 3.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 261 LESNSDSDGEHKAFGGHEHDTWRHLWYFHPVVVGSETV 374 L +SD DG K GGH +D Y P+++ S + Sbjct: 170 LRPSSDGDGGGKPHGGHHNDDAETAAYTLPILIPSRVL 207 >At2g43800.1 68415.m05445 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 894 Score = 28.3 bits (60), Expect = 4.5 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -1 Query: 302 KRFMXXXXXXXXXXFQILSELLVHNFKVRPLVPPMRDYFPRHSITLPF-VFVTVRTSIAI 126 +RF+ + ++EL H V +V + +YF +S T PF +F VR + I Sbjct: 778 ERFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYFHGNSETHPFRIFAVVRDFLTI 837 >At5g11990.1 68418.m01402 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 181 Score = 27.9 bits (59), Expect = 6.0 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -2 Query: 490 CAGLSKTPPLCPQPRLSPSPSTYLP 416 C + PP P P +SP PS LP Sbjct: 38 CPTICSPPPSKPSPSMSPPPSPSLP 62 >At4g15093.1 68417.m02319 catalytic LigB subunit of aromatic ring-opening dioxygenase family contains Pfam PF02900: Catalytic LigB subunit of aromatic ring-opening dioxygenase Length = 269 Score = 27.9 bits (59), Expect = 6.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 135 RGAYGDKNEWESDRMSWKIIPHWWNQRAY 221 +G YGD NEWE + K + H W + Y Sbjct: 204 QGRYGDVNEWEEKAPNAK-MAHPWPEHLY 231 >At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain Length = 196 Score = 27.9 bits (59), Expect = 6.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 378 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 253 R+PS S+ PL S ++ YVHR+ R++ LV N Sbjct: 150 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 191 >At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain Length = 218 Score = 27.9 bits (59), Expect = 6.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 378 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 253 R+PS S+ PL S ++ YVHR+ R++ LV N Sbjct: 172 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 213 >At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain Length = 196 Score = 27.9 bits (59), Expect = 6.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 378 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 253 R+PS S+ PL S ++ YVHR+ R++ LV N Sbjct: 150 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 191 >At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein contains Pfam profile PF00564: PB1 domain Length = 196 Score = 27.9 bits (59), Expect = 6.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 378 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 253 R+PS S+ PL S ++ YVHR+ R++ LV N Sbjct: 150 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 191 >At4g28540.1 68417.m04083 casein kinase, putative similar to casein kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395; contains protein kinase domain, Pfam:PF00069 Length = 479 Score = 27.5 bits (58), Expect = 7.9 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = -2 Query: 343 KYHRCLHVSCSCPPNALCSPSLSEFDSSFKYCPNCLF 233 KY R S P LC EF S F+YC + F Sbjct: 228 KYDRISEKKVSTPIEVLCKSYPPEFVSYFQYCRSLRF 264 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,638,608 Number of Sequences: 28952 Number of extensions: 287092 Number of successful extensions: 966 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 965 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1314848736 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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