Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K20
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 152 2e-37
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 30 0.83
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 30 0.83
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 1.9
AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical ... 29 2.5
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 28 4.4
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 28 4.4
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 27 5.8
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z66567-6|CAA91490.2| 281|Caenorhabditis elegans Hypothetical pr... 27 5.8
U39742-9|AAK39194.1| 183|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 7.7
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 152 bits (368), Expect = 2e-37
Identities = 66/126 (52%), Positives = 84/126 (66%)
Frame = +2
Query: 113 EAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLND 292
+ +R Y V DPI++RVR Y+ H TVDFVK WLKF+H K I L L
Sbjct: 14 KTYRIYDVKAEDPIQVRVRTHYFTQHQKQTVDFVKEMHQKWLKFDHAKMPILGCLDMLAT 73
Query: 293 LVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMAFYEEPEWCVVGD 472
+DESDPD + N++HA+QTAE+IRE+HPD W HL GLIHDLGK+M+ + E +W V GD
Sbjct: 74 FLDESDPDVDEANLIHAYQTAEKIRENHPDKPWMHLAGLIHDLGKIMSVWGEEQWAVTGD 133
Query: 473 TFAVGC 490
T+ VGC
Sbjct: 134 TYPVGC 139
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 30.3 bits (65), Expect = 0.83
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 356 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 442
E ++ + DD W HL G+++D+ K + F+
Sbjct: 25 ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 53
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 30.3 bits (65), Expect = 0.83
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 356 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 442
E ++ + DD W HL G+++D+ K + F+
Sbjct: 61 ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 89
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 101 DKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNW 235
+ P E+F Y+ +E P+++ + +YYD H G DNW
Sbjct: 169 NNPTESFHQYS-EEPYPVQVPLENSYYDSHPRR-----YGNSDNW 207
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 101 DKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNW 235
+ P E+F Y+ +E P+++ + +YYD H G DNW
Sbjct: 169 NNPTESFHQYS-EEPYPVQVPLENSYYDSHPRR-----YGNSDNW 207
>AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical
protein Y34B4A.4b protein.
Length = 833
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = +2
Query: 158 MRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIV 337
M R+ + + +F M F F+S +KD K+ + ES D P
Sbjct: 216 MNARRGFDEDEEEENTNFGSSNMRGGDPFERFRSMLKDKDEKIEAIEGESSSDPGTPGSS 275
Query: 338 HAFQTAERIRE 370
+T ER E
Sbjct: 276 SKSKTIERTSE 286
>AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical
protein Y34B4A.4a protein.
Length = 877
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = +2
Query: 158 MRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIV 337
M R+ + + +F M F F+S +KD K+ + ES D P
Sbjct: 216 MNARRGFDEDEEEENTNFGSSNMRGGDPFERFRSMLKDKDEKIEAIEGESSSDPGTPGSS 275
Query: 338 HAFQTAERIRE 370
+T ER E
Sbjct: 276 SKSKTIERTSE 286
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 475 CVTDHAPFRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 314
C RLLVE H+ + S++VE I+V+ + TD L C E+ ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 475 CVTDHAPFRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 314
C RLLVE H+ + S++VE I+V+ + TD L C E+ ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 92 KYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIK 268
K ED+ E D VD N + ++ KT D D K+D WL + +TI+
Sbjct: 861 KTEDERYEL--DIIVDSNRTVIEQLSKTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIR 917
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical protein
F02E9.4a protein.
Length = 1505
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 92 KYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIK 268
K ED+ E D VD N + ++ KT D D K+D WL + +TI+
Sbjct: 861 KTEDERYEL--DIIVDSNRTVIEQLSKTLRDYEAMSDEDKKSFKLDKWLNASSRSTTIR 917
>Z66567-6|CAA91490.2| 281|Caenorhabditis elegans Hypothetical
protein ZK455.5 protein.
Length = 281
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +2
Query: 230 NWL-KFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRED-HPDDDWFHLI 403
NWL H K +++ I D S PN+ +++ + D ++ L
Sbjct: 78 NWLCNTKHLKGVHENSYIVTLDEESSSALKKTWPNVNQVNIVVPGLKDSFNYGDGYYQLF 137
Query: 404 GLIH-DLGKVMAFYEEPEWCVVGDTF 478
L +L + + Y +P W + DTF
Sbjct: 138 YLFRANLARAILHYNKPFWMIQQDTF 163
>U39742-9|AAK39194.1| 183|Caenorhabditis elegans Hypothetical
protein C25F6.1 protein.
Length = 183
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = +2
Query: 23 NMKIKPESPVSVMDPSLL------LRPEEKYEDKPLEAFRDYTVD 139
N+KIKP +P+ + LL R + +++KP E RD+ ++
Sbjct: 103 NLKIKPNNPIEWLGYCLLNMNINDPRKSKDHKNKPSELLRDFKIE 147
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 224 MDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLI 403
+D W + K AL+ LNDL+ L N +++ + A R R D HLI
Sbjct: 505 IDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNR-----DVGKHLI 559
Query: 404 GLIHDLGK 427
G+ LGK
Sbjct: 560 GVEDLLGK 567
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 224 MDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLI 403
+D W + K AL+ LNDL+ L N +++ + A R R D HLI
Sbjct: 505 IDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNR-----DVGKHLI 559
Query: 404 GLIHDLGK 427
G+ LGK
Sbjct: 560 GVEDLLGK 567
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 224 MDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLI 403
+D W + K AL+ LNDL+ L N +++ + A R R D HLI
Sbjct: 505 IDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNR-----DVGKHLI 559
Query: 404 GLIHDLGK 427
G+ LGK
Sbjct: 560 GVEDLLGK 567
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,455,328
Number of Sequences: 27780
Number of extensions: 267560
Number of successful extensions: 799
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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