Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K19
(390 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 46 2e-07
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 0.23
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 0.23
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.23
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 5.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 6.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 6.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 6.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 6.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 6.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 6.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 6.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 6.6
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 6.6
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 6.6
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 6.6
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 6.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 6.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 6.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 6.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 6.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 6.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 6.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 6.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 6.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 6.6
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 6.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 6.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 6.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 6.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 6.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 6.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 6.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 6.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 6.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 6.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 6.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 6.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 6.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 6.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 6.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 6.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 6.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 8.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 8.7
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 8.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 8.7
AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein. 20 8.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 8.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 8.7
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 46.0 bits (104), Expect = 2e-07
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 DISILFLKSPMEMTPNVGVVCLPLKDE-PAMPGTRCIAMGWGKDKFGKEGRHQTILKKVE 178
DI++L + ++ VG CLP + + G+ +GWG F G IL+K
Sbjct: 257 DIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVTVLGWGHTSFN--GMLSHILQKTT 314
Query: 179 VPVVNRNTCMNKLQTTILGSLFYLHESFMCAGGEPGKDTCKGDGGSPLVCPMEYEDNRYV 358
+ ++ + C ++ + MCA + GKD C+ D G P++ R V
Sbjct: 315 LNMLTQVECYKYYGNIMVNA--------MCAYAK-GKDACQMDSGGPVLW-QNPRTKRLV 364
Query: 359 QNGIVTWG 382
GI++WG
Sbjct: 365 NIGIISWG 372
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.4 bits (53), Expect = 0.23
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 149 DLPFRTCPSPNPWQCNVC 96
DLP+RTC NPW C
Sbjct: 133 DLPWRTC--GNPWNTRYC 148
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 25.4 bits (53), Expect = 0.23
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 149 DLPFRTCPSPNPWQCNVC 96
DLP+RTC NPW C
Sbjct: 186 DLPWRTC--GNPWNTRYC 201
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 0.23
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 321 KGEPPSPLQVSLPGSPP 271
+G PP+P Q PG PP
Sbjct: 36 RGSPPNPSQGPPPGGPP 52
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 5.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VPIY+GNF
Sbjct: 342 VPIYYGNF 349
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 131 VPVYYGNF 138
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 131 VPVYYGNF 138
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 116 VPVYYGNF 123
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 116 VPVYYGNF 123
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 116 VPVYYGNF 123
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 116 VPVYYGNF 123
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 116 VPVYYGNF 123
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 116 VPVYYGNF 123
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 119 VPVYYGNF 126
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 119 VPVYYGNF 126
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 119 VPVYYGNF 126
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 119 VPVYYGNF 126
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 122 VPVYYGNF 129
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 122 VPVYYGNF 129
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 122 VPVYYGNF 129
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 122 VPVYYGNF 129
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 131 VPVYYGNF 138
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 121 VPVYYGNF 128
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 126 VPVYYGNF 133
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 126 VPVYYGNF 133
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 126 VPVYYGNF 133
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 92 VPVYYGNF 99
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 356 VPVYYGNF 363
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 325 VPVYYGNF 332
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 341 VPVYYGNF 348
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 199 VPIYHGNF 176
VP+Y+GNF
Sbjct: 352 VPVYYGNF 359
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 8.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 248 GRTSFPVSLSEAYSYMCSDLPRELPPFL 165
GRT+ + + +Y +L REL P+L
Sbjct: 1155 GRTAQLIIVQAENAYPEVELDRELRPYL 1182
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 8.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 220 DNDTGKLVLPARVLHVR 270
D D LVLP+ LH+R
Sbjct: 152 DYDGKYLVLPSGELHIR 168
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 8.7
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 245 YLHESFMCAGGEPGK 289
Y+H+ + C PGK
Sbjct: 478 YVHDEYTCMDCGPGK 492
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 88 YAWHTLHCHGLGEGQVR 138
+AW L G+GEG R
Sbjct: 616 FAWGVLLNSGIGEGTPR 632
>AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein.
Length = 62
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 210 FIHVFRFTTGTSTFFNM 160
++H F +GTS+F M
Sbjct: 23 YVHEGAFISGTSSFHEM 39
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.2 bits (40), Expect = 8.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 253 VQVEQASQYRCLKLIHTCVPIYHGNF 176
V V QY + +I P ++GN+
Sbjct: 658 VHVTNMDQYNSILMIEHLSPDHNGNY 683
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 312 PPSPLQVSLPGS 277
PP+PL +S GS
Sbjct: 1397 PPTPLSISRAGS 1408
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,553
Number of Sequences: 438
Number of extensions: 3551
Number of successful extensions: 50
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9514659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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