BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K18 (418 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 30 0.54 At5g14540.1 68418.m01704 proline-rich family protein contains pr... 28 2.2 At2g28480.1 68415.m03461 expressed protein contains Pfam profile... 28 2.9 At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 27 3.8 At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transfera... 27 3.8 At1g44446.2 68414.m05114 chlorophyll a oxygenase (CAO) / chlorop... 27 6.7 At5g45520.1 68418.m05591 hypothetical protein 26 8.9 >At3g44340.1 68416.m04764 sec23/sec24 transport family protein contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger Length = 1096 Score = 30.3 bits (65), Expect = 0.54 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +1 Query: 91 IANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLARGG 237 +A P P+ P+ GP P+S+ PA N+P Y P GG Sbjct: 246 MAPPPPYGQPPNAGPFTGNSPLSSPPAHSIPPPTNFPGVPYGRPPMPGG 294 >At5g14540.1 68418.m01704 proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965 Length = 547 Score = 28.3 bits (60), Expect = 2.2 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +1 Query: 100 PDPFFSQPSNGPSG--NYEPISTGPAFVDFNHPNYPPKRYDNPLAR 231 P P S P N P ++ P + P+ +N P PP YD P R Sbjct: 357 PYPQQSYPPNPPRQPPSHPPPGSAPSQQYYNAPPTPPSMYDGPGGR 402 >At2g28480.1 68415.m03461 expressed protein contains Pfam profile PF01985: Uncharacterised protein family; expression supported by MPSS Length = 372 Score = 27.9 bits (59), Expect = 2.9 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -2 Query: 168 RSSAYGFIISARTV*WLREERIRVRNNNSVCGSHGQYGEE 49 R +G +I + W + E ++V NNS G QY EE Sbjct: 187 RRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEE 226 >At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family protein Length = 421 Score = 27.5 bits (58), Expect = 3.8 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 121 PSNGPSGNYEPISTGPAFVDFNHP-NYPPKRYDNP 222 PS+ PS ++ P TGP+ + HP ++ P D P Sbjct: 236 PSSYPSNDHLPPPTGPSDSPYPHPYSHQPYHQDPP 270 >At2g23260.1 68415.m02778 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Length = 456 Score = 27.5 bits (58), Expect = 3.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 Query: 11 SDTIRQ*KLSCFSSSPYWPWLP 76 S I + + SC SSP+ PW+P Sbjct: 96 SKIIEEKRYSCIISSPFTPWVP 117 >At1g44446.2 68414.m05114 chlorophyll a oxygenase (CAO) / chlorophyll b synthase identical to chlorophyll a oxygenase GI:5853117 from [Arabidopsis thaliana]; contains Pfam PF00355 Rieske [2Fe-2S] domain Length = 511 Score = 26.6 bits (56), Expect = 6.7 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -2 Query: 282 FLLVLKSLIFMRHLLPTTGERVVVSLGWIIGMIEIDERRSSAYGFIIS 139 F +LK+L FM HL E+V V WI + + +Y F IS Sbjct: 462 FAPILKNLPFMEHLWRHFAEQVKVHHKWIDHLQPSSQSCFLSYRFYIS 509 >At5g45520.1 68418.m05591 hypothetical protein Length = 1167 Score = 26.2 bits (55), Expect = 8.9 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -1 Query: 274 SFKIAYLYETFTSHHGREGCRIAW 203 SFK+ L E+ T G E +IAW Sbjct: 524 SFKVESLMESLTGLQGLESLKIAW 547 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,751,401 Number of Sequences: 28952 Number of extensions: 141782 Number of successful extensions: 372 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 366 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 372 length of database: 12,070,560 effective HSP length: 74 effective length of database: 9,928,112 effective search space used: 635399168 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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