Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K17
         (184 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    33   4e-04
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   1.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   4.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   7.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              19   7.2  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    19   7.2  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      18   9.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    18   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    18   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 32.7 bits (71), Expect = 4e-04
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
 Frame = +2

Query: 77  LCAGGKPGEDACRGDSGGPLMYEVRNT--FVMVGSVSY 184
           +CA  K G+DAC+ DSGGP++++   T   V +G +S+
Sbjct: 335 MCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISW 371


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 135 RGPPESPLHASSPGLPP 85
           RG P +P     PG PP
Sbjct: 36  RGSPPNPSQGPPPGGPP 52



 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 129 PPESPLHASSPGLPPAHSCS-LVITSAS 49
           P + P     PG PP+ + S ++I+ AS
Sbjct: 42  PSQGPPPGGPPGAPPSQNPSQMMISPAS 69


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +1

Query: 163 NGWICQ 180
           NGWIC+
Sbjct: 376 NGWICE 381


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 90   PPAHSCSLV 64
            PPA+SC  V
Sbjct: 1269 PPAYSCGTV 1277


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 123 PVDPSCMKCVTLS 161
           PV+  C+KC  +S
Sbjct: 132 PVECKCIKCGDIS 144


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 123 PVDPSCMKCVTLS 161
           PV+  C+KC  +S
Sbjct: 132 PVECKCIKCGDIS 144


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = -3

Query: 128 HRSRPCTRLHRVYHPHTV 75
           HR  P  + H   H H V
Sbjct: 64  HRDLPIYQSHHHLHHHQV 81


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 105  SSPGLPPAHSCSLVITSASPPRNVLCAA 22
            S P   P  + ++    + PP +V CAA
Sbjct: 1095 SGPLSEPLLTQTMEDVPSIPPEDVRCAA 1122


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 105  SSPGLPPAHSCSLVITSASPPRNVLCAA 22
            S P   P  + ++    + PP +V CAA
Sbjct: 1091 SGPLSEPLLTQTMEDVPSIPPEDVRCAA 1118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,786
Number of Sequences: 438
Number of extensions: 850
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)