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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K16
         (257 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    93   2e-20
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     93   3e-20
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    93   3e-20
10_07_0189 + 13928680-13928848,13929005-13929267,13929365-13929985     28   1.2  
01_06_0052 - 25994156-25994485,25996861-25996878,25997668-25997880     27   2.7  
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418...    26   3.6  
01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008     26   3.6  
01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448           26   3.6  
04_04_0910 - 29321128-29321276,29321977-29322508,29323301-293237...    26   4.8  
11_01_0634 - 5085037-5085296,5085393-5085995,5087253-5087406,508...    25   6.3  
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822...    25   6.3  
02_01_0705 - 5259949-5263887,5266207-5266509                           25   6.3  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 93.5 bits (222), Expect = 2e-20
 Identities = 38/55 (69%), Positives = 42/55 (76%)
 Frame = +3

Query: 45  MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 209
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K+
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 93.1 bits (221), Expect = 3e-20
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +3

Query: 45  MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 206
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 93.1 bits (221), Expect = 3e-20
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +3

Query: 45  MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 206
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>10_07_0189 + 13928680-13928848,13929005-13929267,13929365-13929985
          Length = 350

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 236 KNLLNLSLVQLFKSNIMRILSEALPADIQAIFTNETMS 123
           K L +L+L +L+K  I R   E  P DI A    +T S
Sbjct: 143 KELADLALYRLYKKKITRGTGEEKPEDIAAASDGDTES 180


>01_06_0052 - 25994156-25994485,25996861-25996878,25997668-25997880
          Length = 186

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 129 HVCLSRLGMNGNPARIYVGVNTRYLRD 49
           H C +R G  GNP + +   ++R LRD
Sbjct: 157 HSCAARSGKFGNPCKRFCVFSSRELRD 183


>12_02_0457 +
           19239816-19241319,19241337-19241632,19241729-19241829,
           19241939-19242029,19242158-19242268,19242360-19242425,
           19242457-19242462
          Length = 724

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 139 RMRPCLFEQARHEREPCP 86
           R RP L+EQ+ H R+P P
Sbjct: 144 RRRPPLYEQSPHRRQPGP 161


>01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008
          Length = 749

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 112 PAQTDMVSFVNMA*ISAGSASESMRMILDLKSWTKLRFNK 231
           P+  DM +  +++   A  AS +  ++LD  +WT+ R+ +
Sbjct: 585 PSSPDMAAACHLSYYCAYLASAAPELLLDSAAWTEKRYKE 624


>01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448
          Length = 850

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 22  RKQTNFTSWVTQISGIHTHVDTGRVPVHAEPAQT 123
           R+ ++FTSWV  +  +      G+ P  A P Q+
Sbjct: 755 RRLSSFTSWVPDLRRVWALKHPGKEPAAAAPPQS 788


>04_04_0910 -
           29321128-29321276,29321977-29322508,29323301-29323706,
           29323933-29324028,29324563-29324645,29326620-29326732,
           29327156-29327315
          Length = 512

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 60  IWYSHPRRYGQGSRSCRACSNRHG 131
           IW  H RR G+GS + R   +RHG
Sbjct: 306 IWPPHARRDGRGSEAAR--MSRHG 327


>11_01_0634 -
           5085037-5085296,5085393-5085995,5087253-5087406,
           5087510-5087671,5087789-5088676
          Length = 688

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 147 HIYE*DHVCLSRLGMNGNPARIYVGVNTRYLRDP*CKISLF 25
           H Y       SR   +G+P R  + V+ RYLR   C++S F
Sbjct: 438 HTYSCRRAVASREAADGDPERPLLLVSPRYLRSL-CRLSGF 477


>07_03_0918 -
           22581625-22581687,22581773-22581868,22581980-22582268,
           22582341-22582477,22582567-22582683,22583277-22583440,
           22583542-22583756,22583838-22584004,22584206-22584559,
           22584647-22584795,22584907-22585030,22585132-22585371,
           22585723-22586140,22586297-22586920,22586999-22587183,
           22587302-22587412,22587583-22587789,22587869-22587967,
           22588063-22588159,22588296-22588384,22588495-22588548,
           22588671-22588793,22588872-22588940,22589020-22589089,
           22589202-22589260,22589367-22589570,22590032-22590060,
           22590375-22590433,22590513-22590634,22591637-22591830,
           22591974-22592088
          Length = 1680

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 239 IKNLLNLSLVQLFKSNIMRILSEALPADIQAIFTNE 132
           + N+LNL+L +L  ++  +  SE +    QA+F N+
Sbjct: 726 VVNILNLALPRLKSASDTKAESEKIIKQTQALFKNQ 761


>02_01_0705 - 5259949-5263887,5266207-5266509
          Length = 1413

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 179 LSEALPADIQAIFTNETMSV*AGSA*TGTLPV 84
           LS ++P+ I  I    TM   +G+A TGTLP+
Sbjct: 830 LSGSIPSGIGNILPQITMLDLSGNALTGTLPL 861


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,206,159
Number of Sequences: 37544
Number of extensions: 137806
Number of successful extensions: 266
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 14,793,348
effective HSP length: 64
effective length of database: 12,390,532
effective search space used: 260201172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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