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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K16
         (257 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80953-1|AAB52557.2|   56|Caenorhabditis elegans Ribosomal prote...   102   3e-23
Z72504-3|CAA96605.1|  449|Caenorhabditis elegans Hypothetical pr...    32   0.065
AF273784-1|AAG15133.1|  459|Caenorhabditis elegans nuclear recep...    32   0.065
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    28   1.1  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    28   1.1  
Z49908-3|CAA90094.2|  382|Caenorhabditis elegans Hypothetical pr...    27   2.4  
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    26   4.2  
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical pr...    25   5.6  
Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z70754-2|CAC42308.1|  764|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z70754-1|CAA94771.2|  966|Caenorhabditis elegans Hypothetical pr...    25   7.4  
U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    25   7.4  
AF164113-1|AAD45535.1|  810|Caenorhabditis elegans zinc finger p...    25   7.4  
AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical ...    25   7.4  
Z35603-2|CAA84674.1|  418|Caenorhabditis elegans Hypothetical pr...    25   9.8  
AF026214-7|AAP68943.1|  640|Caenorhabditis elegans Hypothetical ...    25   9.8  

>U80953-1|AAB52557.2|   56|Caenorhabditis elegans Ribosomal protein,
           small subunitprotein 29 protein.
          Length = 56

 Score =  102 bits (245), Expect = 3e-23
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = +3

Query: 45  MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 212
           MG  N+W+SHPR++G GSRSCR C+  HGLIRKYGL++CR+CFRE A DIGFKKLD
Sbjct: 1   MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56


>Z72504-3|CAA96605.1|  449|Caenorhabditis elegans Hypothetical
           protein C29E6.5 protein.
          Length = 449

 Score = 31.9 bits (69), Expect = 0.065
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 105 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 206
           CR C  R+   + +G++ICR C   +   +  KK
Sbjct: 47  CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 80


>AF273784-1|AAG15133.1|  459|Caenorhabditis elegans nuclear receptor
           NHR-43 protein.
          Length = 459

 Score = 31.9 bits (69), Expect = 0.065
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 105 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 206
           CR C  R+   + +G++ICR C   +   +  KK
Sbjct: 57  CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 90


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 49  VTQISGIHTHVDTGRVPVHAEPAQTDMVSFVNMA*ISAGSASESMRMILD 198
           V  I+ I T + TG++  HA PA T +V  + +   ++   S S  + +D
Sbjct: 325 VINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSSKTVSID 374


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 49  VTQISGIHTHVDTGRVPVHAEPAQTDMVSFVNMA*ISAGSASESMRMILD 198
           V  I+ I T + TG++  HA PA T +V  + +   ++   S S  + +D
Sbjct: 325 VINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSSKTVSID 374


>Z49908-3|CAA90094.2|  382|Caenorhabditis elegans Hypothetical
           protein C07E3.3 protein.
          Length = 382

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 67  IHTHVDTGRVPVHAEPAQT 123
           +H H + GR PV+  PAQT
Sbjct: 252 LHRHPEVGRHPVYVLPAQT 270


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 56  KYLVFTPT*IRAGFPFMPSLLKQTW 130
           KYL+ TP  +R+G P +  + +QTW
Sbjct: 237 KYLM-TPAAVRSGKPLIKLIQRQTW 260


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 56  KYLVFTPT*IRAGFPFMPSLLKQTW 130
           KYL+ TP  +R+G P +  + +QTW
Sbjct: 525 KYLM-TPAAVRSGKPLIKLIQRQTW 548


>Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical
           protein T07G12.11 protein.
          Length = 575

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = -2

Query: 166 CLQIFKPYLRM-RPCLFEQAR-HEREPCPYLRGCEYQIFA*PMM 41
           C QI    LR  +  L + A  HE E C   R CEY     P M
Sbjct: 447 CKQILSWKLRYGKQRLLDHAMTHENEKCLVCRTCEYSCSTHPQM 490


>Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical
           protein T16G1.4 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = -1

Query: 221 LSLVQLFKSNIMRILSEALPADIQAIFTNET 129
           + L++  K +   ++++A  AD+ A+F NE+
Sbjct: 86  VGLLEKLKESEQNVINDANEADLMALFENES 116


>Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical
           protein T07D10.3 protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 138 RKYGLNICRQCFREYAHDIGFK 203
           R YGL +C  C R +  + GF+
Sbjct: 234 RAYGLYVCTTCQRRFRDNKGFQ 255


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
           protein F21G4.6 protein.
          Length = 1885

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 251 FFAYIKNLLNLSLVQLFKSNI-MRILSEA 168
           ++ Y+  L+NL+ + L K+N  +R+ +EA
Sbjct: 49  YYRYVHRLMNLTFISLEKNNADIRLAAEA 77


>Z70754-2|CAC42308.1|  764|Caenorhabditis elegans Hypothetical
           protein F58E6.1b protein.
          Length = 764

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 248 FAYIKNLLNLSLVQLFKSNIMR 183
           F Y KN +NLS   +  SNI+R
Sbjct: 648 FKYSKNNINLSYSNIVASNILR 669


>Z70754-1|CAA94771.2|  966|Caenorhabditis elegans Hypothetical
           protein F58E6.1a protein.
          Length = 966

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 248 FAYIKNLLNLSLVQLFKSNIMR 183
           F Y KN +NLS   +  SNI+R
Sbjct: 648 FKYSKNNINLSYSNIVASNILR 669


>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 93  GSRSCRACSNRHG-LIRKYGLNICRQC 170
           GSR+      R G LI +  LN+CRQC
Sbjct: 326 GSRTPALSRVREGVLIAELDLNLCRQC 352


>AF164113-1|AAD45535.1|  810|Caenorhabditis elegans zinc finger
           protein STAT-B protein.
          Length = 810

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 248 FAYIKNLLNLSLVQLFKSNIMR 183
           F Y KN +NLS   +  SNI+R
Sbjct: 694 FKYSKNNINLSYSNIVASNILR 715


>AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.10 protein.
          Length = 976

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 159 CRQCFREYAHDIGFKK 206
           C  CF+EYAH  G  +
Sbjct: 330 CAICFKEYAHQAGLSE 345


>Z35603-2|CAA84674.1|  418|Caenorhabditis elegans Hypothetical
           protein T02C12.2 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 123 RHGLIRKYGLNICRQCFREYAHDIGFK 203
           RH L+     + CR CF+E+ +  G K
Sbjct: 362 RHELLPNTYTHFCRTCFQEFNYVHGVK 388


>AF026214-7|AAP68943.1|  640|Caenorhabditis elegans Hypothetical
           protein F52H2.1 protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 114 CSNRHGLIRKYGLNICRQCFREYAHD 191
           C     L    G+NI R CF  Y H+
Sbjct: 164 CVGYAKLFLNLGVNIVRVCFGHYGHE 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,237,485
Number of Sequences: 27780
Number of extensions: 120166
Number of successful extensions: 275
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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