BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K16 (257 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U80953-1|AAB52557.2| 56|Caenorhabditis elegans Ribosomal prote... 102 3e-23 Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical pr... 32 0.065 AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear recep... 32 0.065 Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 1.1 Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 28 1.1 Z49908-3|CAA90094.2| 382|Caenorhabditis elegans Hypothetical pr... 27 2.4 U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 26 4.2 U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 26 4.2 Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical pr... 25 5.6 Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 25 7.4 U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 25 7.4 AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 25 7.4 AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 25 7.4 Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical pr... 25 9.8 AF026214-7|AAP68943.1| 640|Caenorhabditis elegans Hypothetical ... 25 9.8 >U80953-1|AAB52557.2| 56|Caenorhabditis elegans Ribosomal protein, small subunitprotein 29 protein. Length = 56 Score = 102 bits (245), Expect = 3e-23 Identities = 40/56 (71%), Positives = 48/56 (85%) Frame = +3 Query: 45 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 212 MG N+W+SHPR++G GSRSCR C+ HGLIRKYGL++CR+CFRE A DIGFKKLD Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56 >Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical protein C29E6.5 protein. Length = 449 Score = 31.9 bits (69), Expect = 0.065 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +3 Query: 105 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 206 CR C R+ + +G++ICR C + + KK Sbjct: 47 CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 80 >AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear receptor NHR-43 protein. Length = 459 Score = 31.9 bits (69), Expect = 0.065 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +3 Query: 105 CRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 206 CR C R+ + +G++ICR C + + KK Sbjct: 57 CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 90 >Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein T22H6.6a protein. Length = 1405 Score = 27.9 bits (59), Expect = 1.1 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 49 VTQISGIHTHVDTGRVPVHAEPAQTDMVSFVNMA*ISAGSASESMRMILD 198 V I+ I T + TG++ HA PA T +V + + ++ S S + +D Sbjct: 325 VINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSSKTVSID 374 >Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical protein T22H6.6a protein. Length = 1405 Score = 27.9 bits (59), Expect = 1.1 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 49 VTQISGIHTHVDTGRVPVHAEPAQTDMVSFVNMA*ISAGSASESMRMILD 198 V I+ I T + TG++ HA PA T +V + + ++ S S + +D Sbjct: 325 VINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSSKTVSID 374 >Z49908-3|CAA90094.2| 382|Caenorhabditis elegans Hypothetical protein C07E3.3 protein. Length = 382 Score = 26.6 bits (56), Expect = 2.4 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 Query: 67 IHTHVDTGRVPVHAEPAQT 123 +H H + GR PV+ PAQT Sbjct: 252 LHRHPEVGRHPVYVLPAQT 270 >U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical protein K10D2.1b protein. Length = 669 Score = 25.8 bits (54), Expect = 4.2 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +2 Query: 56 KYLVFTPT*IRAGFPFMPSLLKQTW 130 KYL+ TP +R+G P + + +QTW Sbjct: 237 KYLM-TPAAVRSGKPLIKLIQRQTW 260 >U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical protein K10D2.1a protein. Length = 1223 Score = 25.8 bits (54), Expect = 4.2 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +2 Query: 56 KYLVFTPT*IRAGFPFMPSLLKQTW 130 KYL+ TP +R+G P + + +QTW Sbjct: 525 KYLM-TPAAVRSGKPLIKLIQRQTW 548 >Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical protein T07G12.11 protein. Length = 575 Score = 25.4 bits (53), Expect = 5.6 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -2 Query: 166 CLQIFKPYLRM-RPCLFEQAR-HEREPCPYLRGCEYQIFA*PMM 41 C QI LR + L + A HE E C R CEY P M Sbjct: 447 CKQILSWKLRYGKQRLLDHAMTHENEKCLVCRTCEYSCSTHPQM 490 >Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical protein T16G1.4 protein. Length = 436 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/31 (29%), Positives = 20/31 (64%) Frame = -1 Query: 221 LSLVQLFKSNIMRILSEALPADIQAIFTNET 129 + L++ K + ++++A AD+ A+F NE+ Sbjct: 86 VGLLEKLKESEQNVINDANEADLMALFENES 116 >Z81588-3|CAB04715.2| 377|Caenorhabditis elegans Hypothetical protein T07D10.3 protein. Length = 377 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 138 RKYGLNICRQCFREYAHDIGFK 203 R YGL +C C R + + GF+ Sbjct: 234 RAYGLYVCTTCQRRFRDNKGFQ 255 >Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein F21G4.6 protein. Length = 1885 Score = 25.0 bits (52), Expect = 7.4 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = -1 Query: 251 FFAYIKNLLNLSLVQLFKSNI-MRILSEA 168 ++ Y+ L+NL+ + L K+N +R+ +EA Sbjct: 49 YYRYVHRLMNLTFISLEKNNADIRLAAEA 77 >Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical protein F58E6.1b protein. Length = 764 Score = 25.0 bits (52), Expect = 7.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 248 FAYIKNLLNLSLVQLFKSNIMR 183 F Y KN +NLS + SNI+R Sbjct: 648 FKYSKNNINLSYSNIVASNILR 669 >Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical protein F58E6.1a protein. Length = 966 Score = 25.0 bits (52), Expect = 7.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 248 FAYIKNLLNLSLVQLFKSNIMR 183 F Y KN +NLS + SNI+R Sbjct: 648 FKYSKNNINLSYSNIVASNILR 669 >U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical protein F13H8.7 protein. Length = 387 Score = 25.0 bits (52), Expect = 7.4 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +3 Query: 93 GSRSCRACSNRHG-LIRKYGLNICRQC 170 GSR+ R G LI + LN+CRQC Sbjct: 326 GSRTPALSRVREGVLIAELDLNLCRQC 352 >AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger protein STAT-B protein. Length = 810 Score = 25.0 bits (52), Expect = 7.4 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 248 FAYIKNLLNLSLVQLFKSNIMR 183 F Y KN +NLS + SNI+R Sbjct: 694 FKYSKNNINLSYSNIVASNILR 715 >AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical protein Y48G8AL.10 protein. Length = 976 Score = 25.0 bits (52), Expect = 7.4 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +3 Query: 159 CRQCFREYAHDIGFKK 206 C CF+EYAH G + Sbjct: 330 CAICFKEYAHQAGLSE 345 >Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical protein T02C12.2 protein. Length = 418 Score = 24.6 bits (51), Expect = 9.8 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +3 Query: 123 RHGLIRKYGLNICRQCFREYAHDIGFK 203 RH L+ + CR CF+E+ + G K Sbjct: 362 RHELLPNTYTHFCRTCFQEFNYVHGVK 388 >AF026214-7|AAP68943.1| 640|Caenorhabditis elegans Hypothetical protein F52H2.1 protein. Length = 640 Score = 24.6 bits (51), Expect = 9.8 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = +3 Query: 114 CSNRHGLIRKYGLNICRQCFREYAHD 191 C L G+NI R CF Y H+ Sbjct: 164 CVGYAKLFLNLGVNIVRVCFGHYGHE 189 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,237,485 Number of Sequences: 27780 Number of extensions: 120166 Number of successful extensions: 275 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 275 length of database: 12,740,198 effective HSP length: 64 effective length of database: 10,962,278 effective search space used: 230207838 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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