BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K14 (512 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_03_0325 - 17731567-17731606,17731776-17731951 28 5.1 05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363... 27 8.8 04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 27 8.8 03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 27 8.8 >02_03_0325 - 17731567-17731606,17731776-17731951 Length = 71 Score = 27.9 bits (59), Expect = 5.1 Identities = 10/21 (47%), Positives = 17/21 (80%) Frame = +1 Query: 178 ILMFLLLAIVHSRLWLYTTRI 240 +L F+LL I+HS++WL +R+ Sbjct: 17 VLPFMLLRILHSQVWLTISRL 37 >05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710, 3630884-3630985,3631075-3631290,3632217-3632297, 3633152-3633235,3633405-3633509,3634338-3634516, 3634681-3634765,3634889-3635090,3635165-3635234, 3635353-3635422,3635745-3635834,3636020-3636088, 3636520-3636618,3636804-3636914 Length = 606 Score = 27.1 bits (57), Expect = 8.8 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = -1 Query: 335 YDLLKXXXXFRNILFNYITGRHSQ*R*KLTTYIRVVYNHRRLCTIANKRNINI 177 Y +K N L NY K T + + Y H R+C+I K N ++ Sbjct: 457 YGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDV 509 >04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915, 1713004-1714170,1714378-1714430 Length = 662 Score = 27.1 bits (57), Expect = 8.8 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 177 QFIFLNLVLLSSCCHINKLPL*IF*SFIHQSSL 79 Q + N+V L CC ++K+PL ++ FI +L Sbjct: 382 QIVHRNVVKLFGCCLVSKVPLLVY-EFISNGTL 413 >03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384, 27059759-27059866,27060314-27060406,27060499-27060669, 27061505-27061757,27061860-27062138,27062939-27063273, 27063364-27064332,27064711-27065182,27065243-27065291, 27066564-27066804,27067606-27067695,27068172-27068294, 27068365-27068418 Length = 1175 Score = 27.1 bits (57), Expect = 8.8 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = +3 Query: 132 YDNMNLVAQGLKK*TDINVSFVGDCT*PPMVIYDSYISRQFLTSL 266 Y +N + LK + I+VSFV +C P + +S++FLT L Sbjct: 821 YRQLNCLGSKLK--SCIHVSFVSECGLPEAGLDYGGLSKEFLTDL 863 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,831,202 Number of Sequences: 37544 Number of extensions: 183730 Number of successful extensions: 300 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 300 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1106928780 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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