Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K13
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 81 6e-16
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 81 6e-16
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z32679-8|CAM33498.1| 119|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 32 0.37
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 32 0.37
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.49
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 2.6
U23451-2|AAC46746.1| 107|Caenorhabditis elegans Insulin related... 29 3.4
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 28 4.5
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 6.0
AF016415-4|AAW88419.1| 298|Caenorhabditis elegans Serpentine re... 27 7.9
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 81.0 bits (191), Expect = 6e-16
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Frame = +3
Query: 12 IVKEGTCEEAD-PCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSL-EMKHRGEC---- 173
+VK E + P C + PVC T+G T+ N+C ++ S+ ++KH+G C
Sbjct: 382 VVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGV 441
Query: 174 ----------QEVKVADIQP-CIC---TREIKQVCGSDGVTYGNPC-LLNCATQSNPSLS 308
Q V D +P C+C T E K+VCGSDG TY N C L N A + ++
Sbjct: 442 CATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIF 501
Query: 309 IEHPGPCDNRVKVVENQPESNKVIVVDNNNAPSCACTRNL--------EPVCASNGVTYN 464
+++ C+ K+ + + + VV N C C + + VC ++GVTY+
Sbjct: 502 VKYNSACE-ACKLKKEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYS 560
Query: 465 NECMMR---CHGGDHLTVVTHEPCN 530
+EC M+ CH + C+
Sbjct: 561 SECHMKKSACHQSKFVMTAFEGKCD 585
Score = 66.5 bits (155), Expect = 1e-11
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Frame = +3
Query: 54 CTFIYAPVCGTDGNTYPNKCSLE-----------------CSRPLAP--SLEMKHRGEC- 173
CT A VCGTDG TY N+C L+ C +P +E G C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 174 -QEVKVADIQ-PCICTREIKQVCGSDGVTYGNPCLL---NCATQSNPSLSIEHPGPCDNR 338
+ + A+ + P C ++ VC ++G T+ N C + +C T+S + ++H G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKS--MIKVKHQGTCGIG 440
Query: 339 VKVVENQPESNKV-IVVDNNNAPSC-ACTRNLEPVCASNGVTYNNECMMR---CHGGDHL 503
V + + +V +VVD C +CT + VC S+G TY+NEC ++ C ++
Sbjct: 441 VCATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNI 500
Query: 504 TVVTHEPCNA*K 539
V + C A K
Sbjct: 501 FVKYNSACEACK 512
Score = 46.0 bits (104), Expect = 2e-05
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 23/156 (14%)
Frame = +3
Query: 75 VCGTDGNTYPNKCSLECSRPLAPSLEMK-HRGECQEVKVADIQ--------PCICTREIK 227
VCGTDG TY ++C ++ S M G+C E + C+C+
Sbjct: 551 VCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCP 610
Query: 228 -------QVCGSDGVTYGNPCLLNCAT-QSNPSLSIEHPGPCDNRVKVVENQPESNKVIV 383
++CG +GV Y + C L A+ Q +S P C + +
Sbjct: 611 ANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPPSHCHSSKTSFPDFKVRRPCAC 670
Query: 384 VDNNNAPSCACTR---NLE---PVCASNGVTYNNEC 473
+ ACT NL P+C S+G+ YNN+C
Sbjct: 671 YFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQC 706
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Frame = +3
Query: 231 VCGSDGVTYGNPCLL---NCATQSN-PSLSIEHPGPCDNRVKVVENQPESNKVIVVDNNN 398
VCGSD V+Y + C L +C N L + GPC R + + + VV+ N
Sbjct: 176 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPCEDLRCGPGEDCVVNQIN 235
Query: 399 A---PSCACTRNL---------EPVCASNGVTYNNECMMRCHGGDHLTVVT 515
C C PVC+S+GV Y + C +R H + T +T
Sbjct: 236 GILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLRHHACESKTNIT 286
Score = 32.7 bits (71), Expect = 0.21
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 31/108 (28%)
Frame = +3
Query: 48 CVCTF-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECQEVKVA--D 194
CVC++ + A +CG +G YP+ C L+ + + AP EM C K + D
Sbjct: 603 CVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPP-SHCHSSKTSFPD 661
Query: 195 IQ---PCIC--------------TREIKQ---VCGSDGVTYGNPCLLN 278
+ PC C T + +CGSDG+ Y N C LN
Sbjct: 662 FKVRRPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLN 709
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 75 VCGTDGNTYPNKCSLE 122
VCG+DG TY N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 231 VCGSDGVTYGNPCLL 275
VCGSDG TY N C L
Sbjct: 880 VCGSDGTTYSNLCEL 894
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 81.0 bits (191), Expect = 6e-16
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 32/205 (15%)
Frame = +3
Query: 12 IVKEGTCEEAD-PCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSL-EMKHRGEC---- 173
+VK E + P C + PVC T+G T+ N+C ++ S+ ++KH+G C
Sbjct: 390 VVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGV 449
Query: 174 ----------QEVKVADIQP-CIC---TREIKQVCGSDGVTYGNPC-LLNCATQSNPSLS 308
Q V D +P C+C T E K+VCGSDG TY N C L N A + ++
Sbjct: 450 CATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIF 509
Query: 309 IEHPGPCDNRVKVVENQPESNKVIVVDNNNAPSCACTRNL--------EPVCASNGVTYN 464
+++ C+ K+ + + + VV N C C + + VC ++GVTY+
Sbjct: 510 VKYNSACE-ACKLKKEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYS 568
Query: 465 NECMMR---CHGGDHLTVVTHEPCN 530
+EC M+ CH + C+
Sbjct: 569 SECHMKKSACHQSKFVMTAFEGKCD 593
Score = 66.5 bits (155), Expect = 1e-11
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Frame = +3
Query: 54 CTFIYAPVCGTDGNTYPNKCSLE-----------------CSRPLAP--SLEMKHRGEC- 173
CT A VCGTDG TY N+C L+ C +P +E G C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 174 -QEVKVADIQ-PCICTREIKQVCGSDGVTYGNPCLL---NCATQSNPSLSIEHPGPCDNR 338
+ + A+ + P C ++ VC ++G T+ N C + +C T+S + ++H G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKS--MIKVKHQGTCGIG 448
Query: 339 VKVVENQPESNKV-IVVDNNNAPSC-ACTRNLEPVCASNGVTYNNECMMR---CHGGDHL 503
V + + +V +VVD C +CT + VC S+G TY+NEC ++ C ++
Sbjct: 449 VCATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNI 508
Query: 504 TVVTHEPCNA*K 539
V + C A K
Sbjct: 509 FVKYNSACEACK 520
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Frame = +3
Query: 231 VCGSDGVTYGNPCLL---NCATQSN-PSLSIEHPGPCDNRVKVVENQPESNKVIVVDNNN 398
VCGSD V+Y + C L +C N L + GPC R + + + VV+ N
Sbjct: 184 VCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPCKKRNPCEDLRCGPGEDCVVNQIN 243
Query: 399 A---PSCACTRNL---------EPVCASNGVTYNNECMMRCHGGDHLTVVT 515
C C PVC+S+GV Y + C +R H + T +T
Sbjct: 244 GILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLRHHACESKTNIT 294
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Frame = +3
Query: 48 CVCTF-------IYAPVCGTDGNTYPNKCSLECS--RPLAPSLEMKHRGECQEVKVADIQ 200
CVC++ + A +CG +G YP+ C L+ + + AP EM C K +
Sbjct: 611 CVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPD 669
Query: 201 PCICTR 218
C C R
Sbjct: 670 SCQCNR 675
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 75 VCGTDGNTYPNKCSLE 122
VCG+DG TY N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 231 VCGSDGVTYGNPCLL 275
VCGSDG TY N C L
Sbjct: 819 VCGSDGTTYSNLCEL 833
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Frame = +3
Query: 48 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIK 227
C C + PVCGTD TY N C L C + L + G C + K C +
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKE-------CEKVGT 71
Query: 228 QVCGSDGVTYGNPC---LLNCATQSNPSLSIE--HPGPCDNRVKVVENQPESNKVIVVDN 392
+C + G T+ N C C + + LS+ H G C ++ D
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSK----------------DC 115
Query: 393 NNAPSCACTRNLEPVCASNGVTYNNEC---MMRC 485
N+ +C T +PVC +NG Y N C M RC
Sbjct: 116 NH--NCTNT-EFDPVCDTNGSVYRNLCVFQMRRC 146
Score = 48.8 bits (111), Expect = 3e-06
Identities = 44/147 (29%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +3
Query: 54 CTFIYAPVCGTDGNTYPNKCSL--ECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIK 227
C Y P+CGT+G T+ N CSL E ++E+ + G C + C +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFS 823
Query: 228 QVCGSDGVTYGNPC---LLNCATQSN--PSLSIEHPGPCDNRVKVVENQPESNKVIVVDN 392
VC S G T+ N C + C + L+I+ C N VK N
Sbjct: 824 PVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVC-NEVKECNN------------ 870
Query: 393 NNAPSCACTRNLEPVCASNGVTYNNEC 473
AC + PVCASNG NEC
Sbjct: 871 ------ACPKEYSPVCASNGQNIVNEC 891
Score = 48.8 bits (111), Expect = 3e-06
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 14/172 (8%)
Frame = +3
Query: 6 LKIVKEGTCEEADPC--VCTFIYAPVCGTDGNTYPNKCSLECSRPLAPS-------LEMK 158
L I K C E C C Y+PVC ++G N+C L+ R L + L
Sbjct: 854 LTIDKFEVCNEVKECNNACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKD 913
Query: 159 HRGECQEVKVADIQPCICTREIKQVCGSDGVTYGNPCLL--NCATQ---SNPSLSIEHPG 323
+ GEC ++ DI VC ++GVT+ N CL+ N Q + ++ + + G
Sbjct: 914 YDGECCRIENCDIS------VFSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQG 967
Query: 324 PCDNRVKVVENQPESNKVIVVDNNNAPSCACTRNLEPVCASNGVTYNNECMM 479
C N+ + P + I N A E V + + Y+ EC +
Sbjct: 968 QCCNQPCDEDKTPVCDGTITHPNICRFRIA-QCEAERVNKTLSIAYSGECCL 1018
Score = 42.3 bits (95), Expect = 3e-04
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Frame = +3
Query: 3 DLKIVKEGTCEEA--DPCVCTFIYAP----VCGTDGNTYPNKCS---LEC--SRPLAPSL 149
+L+++ +G C E PC +P VC D +T + C L C R +L
Sbjct: 620 ELEVLFKGKCSECLDSPCALPAENSPDESFVCLEDQST-KSLCEYQMLSCIFERGYGVNL 678
Query: 150 EMKHRGECQEVKVADIQPCICTREIKQVCGSDGVTYGNPCLLN---CATQS--NPSLSIE 314
+++ G C ++ C T + VC G T+ C LN C + P L +
Sbjct: 679 TVQYIGVC----CPPVESCD-TEKPDPVCTDSGATFLTECELNIENCKLKKLDQPKLVVV 733
Query: 315 HPGPCDNRVKVVE---NQPESNKVIVVDNNNAPSCA--CTRNLEPVCASNGVTYNNECMM 479
G C+ + + N+ I N +C+ C + +P+C +NGVT+ N C +
Sbjct: 734 SQGICEKDMLTDDFSSNRNFQKPNIEFKRENTFNCSMECDNSYDPLCGTNGVTFTNACSL 793
Query: 480 R 482
+
Sbjct: 794 Q 794
Score = 41.1 bits (92), Expect = 6e-04
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 402 PSCACTRNLEPVCASNGVTYNNECMMRC 485
P C C + PVC ++ VTYNN C +RC
Sbjct: 17 PDCDCPSVIRPVCGTDNVTYNNLCFLRC 44
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 6/119 (5%)
Frame = +3
Query: 72 PVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVA-DIQPCICTREIKQVCGSDG 248
PVC + GN + N C SR +A S + +E ++ + CT + +C SD
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHPICASDF 602
Query: 249 VTYGNPCLLNCATQSNPSLSIEHPGPCDNRVK-----VVENQPESNKVIVVDNNNAPSC 410
TY N C + L + G C + EN P+ + V + D + C
Sbjct: 603 STYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSPDESFVCLEDQSTKSLC 661
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 6 LKIVKEGTCEEADPCV--CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQE 179
+ I E C + C CT P+C +D +TY N C + L LE+ +G+C E
Sbjct: 572 IHIATEENCISKEACQMPCTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 38.3 bits (85), Expect = 0.004
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 8/166 (4%)
Frame = +3
Query: 6 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPS-----LEMKHRGE 170
+++ G C + + C ++PVC + G+T+ N C R +A L +
Sbjct: 805 IEVAYTGMCCDTN---CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEV 861
Query: 171 CQEVKVADIQPCICTREIKQVCGSDGVTYGNPCLLN---CATQSNPSLSIEHPGPCDNRV 341
C EVK + C +E VC S+G N C L+ C ++N + + D
Sbjct: 862 CNEVKECN---NACPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC 918
Query: 342 KVVENQPESNKVIVVDNNNAPSCACTRNLEPVCASNGVTYNNECMM 479
+EN C + PVC + GVT+ N C+M
Sbjct: 919 CRIEN-----------------CDIS-VFSPVCDTEGVTHANMCLM 946
Score = 35.5 bits (78), Expect = 0.030
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Frame = +3
Query: 54 CTFIYAPVCGTDGNTYPNKCSLE---C--SRPLAPSLEMKHRGECQEVKVADIQPCI-CT 215
C + PVC T T+ N C + C ++ +++ H G C+ K CI C
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARK----STCITCP 312
Query: 216 REIKQV--CGSDGVTYGNPCLL---NCATQSNPSLSIEHPGPCDNRVKV-VENQPESNKV 377
++ K++ C + +T+ C NC ++N + RV V +++ E +
Sbjct: 313 KDEKKIPICDNRNMTHPTLCSFIQYNCEARNNED---------EERVLVHIKSCHERSPQ 363
Query: 378 IVVDNNNAPSCACTRNLEPVCASNGVTYNNEC 473
+ + P C+R+++PVC T+ N C
Sbjct: 364 FTLKDEICPR-TCSRDVKPVCDEANNTHQNLC 394
Score = 35.5 bits (78), Expect = 0.030
Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 21/151 (13%)
Frame = +3
Query: 72 PVCGTDGNTYPNKCSL----------ECSRPLAPSLEMKHRGECQEVKVADIQPCICTRE 221
P+C T+P CS E + ++ H Q +I P C+R+
Sbjct: 319 PICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCSRD 378
Query: 222 IKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHP-----GPC------DNRVKVVENQPES 368
+K VC T+ N C + L I P PC DN V+ VE +
Sbjct: 379 VKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPCVKNRKIDNAVENVEMRATV 438
Query: 369 NKVIVVDNNNAPSCACTRNLEPVCASNGVTY 461
+ V++ + + T L+ AS T+
Sbjct: 439 SNVVIKTSKSVAESTTTSQLKQTVASEKTTF 469
Score = 32.7 bits (71), Expect = 0.21
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Frame = +3
Query: 75 VCGTDGNTYPNKCSLECSRPLAPSLEMK-----HRGECQEVKVADIQPCICTREIKQVCG 239
VC ++G T+ N C + R +A ++ K H GEC + C + + VC
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCAL-------ASCPKTGQPVCD 1082
Query: 240 SDGVT-------YGNPCLLNCATQSNPSLSIEHPGPC 329
S G T + + C+ + N +L++++ G C
Sbjct: 1083 SRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC 1119
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/91 (25%), Positives = 35/91 (38%)
Frame = +3
Query: 6 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVK 185
L IV G C C T PVC + G T+ + C S+ + + ++ + +
Sbjct: 1059 LNIVHTGECCALASCPKTG--QPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQ 1116
Query: 186 VADIQPCICTREIKQVCGSDGVTYGNPCLLN 278
P CT E+ +C Y N C N
Sbjct: 1117 -GKCCPAGCTDELSVICDQHENIYRNSCYFN 1146
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 414 CTRNLEPVCASNGVTYNNECMMR 482
CT + P+CAS+ TY N C R
Sbjct: 590 CTDDKHPICASDFSTYENLCQFR 612
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 204 CICTREIKQVCGSDG---VTYGNPCLLNCATQSNPSLSIEHPGPC 329
C C EI VC +G TY N C+ CA ++ L + + G C
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSC 69
Score = 32.3 bits (70), Expect = 0.28
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 405 SCACTRNLEPVCASNG---VTYNNECMMRC 485
+C+C ++PVC G TY+N+C+ +C
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQC 53
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 33 EEADPCVCTFIYAPVCGTDGN---TYPNKCSLECSRPLAPSLEMKHRGECQEVKVADI-- 197
E C C PVC +G TY NKC +C++ L + + G C + ++
Sbjct: 20 EPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSARYCNMFE 79
Query: 198 QPCICT 215
QP +C+
Sbjct: 80 QP-VCS 84
Score = 30.7 bits (66), Expect = 0.85
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 54 CTFIYAPVCGTDGNTYPNKCSL---EC--SRPLAPSLEMKHRGECQEVKVADIQPCICTR 218
C + PVC G T+ N C+ +C L SLE+ + G C E C +
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE------DMCSAGQ 178
Query: 219 EIKQVCGSDGVTYGNPC 269
VC S+G T+ + C
Sbjct: 179 TSLTVCDSEGNTHTDIC 195
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 6 LKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVK 185
L++ G C E D C VC ++GNT+ + CS +A +M+ + ++
Sbjct: 161 LEVDYSGVCCE-DMCSAGQTSLTVCDSEGNTHTDICSFY----IAKCRQMRRGIGKKRLQ 215
Query: 186 VADIQPC 206
+A + PC
Sbjct: 216 IAGVGPC 222
>Z32679-8|CAM33498.1| 119|Caenorhabditis elegans Hypothetical
protein C05B5.11 protein.
Length = 119
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 342 KVVENQPESNKVIVVDNNNAPSCACTRNLEPVCASNGVTYNNECMMRCHGGDHLTVVTHE 521
++ +NQPE + +A + AC+ NLE C + G+ + EC++ G + + T
Sbjct: 17 QIDDNQPELQRTFFGIIGSAKAKACSTNLE--CGNKGICVDGECLVDNGLGGYCSTSTQC 74
Query: 522 P 524
P
Sbjct: 75 P 75
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 31.9 bits (69), Expect = 0.37
Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 5/146 (3%)
Frame = +3
Query: 48 CVCTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIK 227
C C P C + CS + S P + + ++ +++ + P C +
Sbjct: 28 CGCAQSVQPTCSCQQASQQYSCSCQPSTPCSCASSQQY-----QLQTSQCMPA-CQQSCS 81
Query: 228 QVCGSDGVTYGNP-CLLNCATQS-NPSLSIEHPGPCDNRVKVVENQPESNKVIVVDNNNA 401
Q C S+ T P C +C T S NP S P + + EN+ A
Sbjct: 82 QQCQSNTNTQCQPTCQQSCQTSSCNPMTSTPIPA-SQSCLPECENRCMQQ---CTQQQTA 137
Query: 402 PSC--ACTRNLEPVCASNG-VTYNNE 470
C C + + C S G + YNN+
Sbjct: 138 QQCQPICQQQCQQECGSTGNMMYNNQ 163
Score = 31.5 bits (68), Expect = 0.49
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 5/166 (3%)
Frame = +3
Query: 78 CGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCGSDG-VT 254
C T + S+ P E + +C + + A IC ++ +Q CGS G +
Sbjct: 100 CQTSSCNPMTSTPIPASQSCLPECENRCMQQCTQQQTAQQCQPICQQQCQQECGSTGNMM 159
Query: 255 YGNPCLLN---CATQSNPSLSIEHPGPCDNRVKVVENQPESNKVIVVDNNNA-PSCACTR 422
Y N N + ++ N ++NQ N+ + N C +
Sbjct: 160 YNNQDPYNQMQYGGYNQQGNQYQNQNQYQN-PNQIQNQYNQNQYQNQNYYNPYQQTQCQQ 218
Query: 423 NLEPVCASNGVTYNNECMMRCHGGDHLTVVTHEPCNA*KNQMIYYC 560
P C+ T +C C + T+ + + +Q + C
Sbjct: 219 QCAPQCSQQTSTNCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQC 264
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 31.9 bits (69), Expect = 0.37
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCIC--TREIKQVCG 239
+ C G YPN +++C + E K R E+ V+ + C T+E + V
Sbjct: 85 FTVTCNELGAIYPNPSNIDCGESVQ---ERKIRDTTNEM-VSSCKVCFGRGTKECQPVTN 140
Query: 240 SDGVTYGNPCL 272
SDGV G C+
Sbjct: 141 SDGVVQGYKCV 151
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 31.5 bits (68), Expect = 0.49
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 141 PSLEMKHRGECQEVKVADIQPCICTREIKQV-CGSD-GVTYGNPCLLNCATQSNPSLSIE 314
P E+ H G C E K+ + C C + K V CGSD V C + + I
Sbjct: 333 PCTELCHPGPCIECKLFTTKSCNCGKTKKSVRCGSDQEVMCETVCGKQLSCGQHNCERIC 392
Query: 315 HPGPCDNRVKVVE 353
H G C ++E
Sbjct: 393 HSGDCGECTVILE 405
Score = 29.1 bits (62), Expect = 2.6
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 18/157 (11%)
Frame = +3
Query: 78 CGTDGNTYPNKCSLECSRPLAPSLE----MKHRGECQEVKVADIQPCICTREIKQV---- 233
CG+D C C + L+ + H G+C E V Q C C + K+V
Sbjct: 365 CGSDQEVM---CETVCGKQLSCGQHNCERICHSGDCGECTVILEQDCFCGKTPKEVSCNP 421
Query: 234 CGSDGVTYGNPC--LLNCAT-QSNPSLSIEHPGPCD---NRVKVVENQPESNKVIVVDNN 395
C + + G+ C + +C + G C+ NR++ + + + V
Sbjct: 422 CAHEKYSCGSECDGMFSCGIHHCTKKCHDKECGECETGANRIRTCPCGRNTLQSLGVTRK 481
Query: 396 N----APSCACTRNLEPVCASNGVTYNNECMMRCHGG 494
P+C + C + G N+ C +CH G
Sbjct: 482 KCTDMVPTCDSVCDKWLTCGTPG--KNHHCREKCHEG 516
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.1 bits (62), Expect = 2.6
Identities = 39/134 (29%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Frame = +3
Query: 105 NKCSLECSRPLAPSLEMKHRGECQEVKVADIQ-PCICTREIKQVCGSDGVTYGN-----P 266
N C EC P+A S ++ Q V + P R IK V + G T+ N P
Sbjct: 118 NGCGRECVAPIAKSFQIDREVPIQPVSSSSNNIPGSFQRLIKAV-SNIGSTHFNITPIPP 176
Query: 267 CLLNCATQSNPSLSIEHPGPCDNRVKVVE-NQPESNKVIVVDNNNAPSCACTRNLEPVCA 443
+ N A P+ S P P KV + P SNK I +D C +L+ C
Sbjct: 177 TIRNLANSLFPTPSPIRPLP---TTKVGQCPSPTSNKSICIDQKQ-----CANDLD--CG 226
Query: 444 SNGVTYNNECMMRC 485
S N C C
Sbjct: 227 SVDKCCQNACGSTC 240
>U23451-2|AAC46746.1| 107|Caenorhabditis elegans Insulin related
protein 3 protein.
Length = 107
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -3
Query: 353 FHNLHSVVARTRVFDAQARVRLCG 282
FHN+HS++AR+R D +V++CG
Sbjct: 43 FHNIHSLMARSRRGD---KVKICG 63
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 28.3 bits (60), Expect = 4.5
Identities = 37/188 (19%), Positives = 60/188 (31%), Gaps = 10/188 (5%)
Frame = +3
Query: 27 TCEEADPCVCTFI---YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADI 197
TC DPC C + Y +C N C + + + Q V
Sbjct: 37 TCTPQDPCSCFSVSARYGAICHYSSNYNNYLCCHSQNTQCGTNSSPQVSASGQVVTCFTN 96
Query: 198 QPCICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLS--IEHPGPCDNRVKVVENQPESN 371
C +C S+G N C+T P + I G C N V + + S
Sbjct: 97 SQCAS----GYIC-SNGACCPNTNSNTCSTTGTPCFTGQISVGGQCFNSVNIGDRCQRSE 151
Query: 372 KVIVVDNNNAPSCACTR-----NLEPVCASNGVTYNNECMMRCHGGDHLTVVTHEPCNA* 536
+ + C C N + C V +N++C+ G + + + N+
Sbjct: 152 QCLGGSQCQNNLCQCPNGFANVNQKCACQLGTVLFNSQCITLASPGQNCQISSQCIDNSV 211
Query: 537 KNQMIYYC 560
N + C
Sbjct: 212 CNNQMCSC 219
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 213 TREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQPESNK----VI 380
T EI++ CG D V + ++ A N S +E P P + + N+ E ++ V+
Sbjct: 1174 TSEIEKRCGFDAVLHVFSIHMHWANLFNASCILESPEPTKDSTSIDVNEVEPSRDQKPVV 1233
Query: 381 VVDNNNAP 404
V + P
Sbjct: 1234 VTKDETTP 1241
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 54 CTFIYAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQV 233
CT P C +C+ +C +P AP + + + CQ VA P I T E+
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 234 C 236
C
Sbjct: 282 C 282
>AF016415-4|AAW88419.1| 298|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 31 protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 343 FTLLSQGPGCSMLKLGFDCVAQFNRHGLP 257
FT++ + GC++ + C+ +F +HG P
Sbjct: 255 FTVVMKVTGCAIESIVVSCLLKFGKHGKP 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,540,108
Number of Sequences: 27780
Number of extensions: 334315
Number of successful extensions: 1141
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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