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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K13
         (610 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36490.1 68417.m05181 SEC14 cytosolic factor, putative / phos...    33   0.11 
At5g40942.1 68418.m04973 ribonucleoside-diphosphate reductase sm...    31   0.60 
At2g18180.1 68415.m02115 SEC14 cytosolic factor, putative / phos...    31   0.60 
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea...    28   0.76 
At2g31770.1 68415.m03879 zinc finger (C3HC4-type RING finger) fa...    31   0.79 
At2g28830.1 68415.m03505 armadillo/beta-catenin repeat family pr...    30   1.4  
At5g26920.1 68418.m03210 calmodulin-binding protein similar to c...    28   4.2  
At4g28630.1 68417.m04093 ABC transporter family protein identica...    28   4.2  
At3g14850.2 68416.m01876 expressed protein                             28   4.2  
At3g14850.1 68416.m01877 expressed protein                             28   4.2  
At5g44120.3 68418.m05400 12S seed storage protein (CRA1) nearly ...    27   7.4  
At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type f...    27   7.4  
At5g58080.1 68418.m07268 two-component responsive regulator fami...    27   9.7  
At3g51560.1 68416.m05646 disease resistance protein (TIR-NBS-LRR...    27   9.7  
At3g48500.1 68416.m05294 expressed protein                             27   9.7  
At2g39770.1 68415.m04883 GDP-mannose  pyrophosphorylase (GMP1) i...    27   9.7  

>At4g36490.1 68417.m05181 SEC14 cytosolic factor, putative /
           phosphoglyceride transfer protein, putative similar to
           phosphatidylinositol transfer-like protein IV
           (GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
           CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
           N-terminus; supporting cDNA gi|23463078|gb|BT000834.1|
          Length = 543

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 336 RVKVVENQPESNKVIVVDNNNAP-----SCACTRNLEPVCASNGVTYNNECMMRCHGGDH 500
           ++ V+ N+ +S  + ++D +  P     SC C  N   + +  G   N E M R H GDH
Sbjct: 261 KIHVLGNKYQSKLLEIIDESELPEFLGGSCTCADNGGCMRSDKGPWKNPEIMKRVHNGDH 320


>At5g40942.1 68418.m04973 ribonucleoside-diphosphate reductase small
           chain, putative / ribonucleotide reductase, putative
           similar to ribonucleotide reductase R2 [Nicotiana
           tabacum] GI:1044912; contains Pfam profile PF00268:
           Ribonucleotide reductase, small chain
          Length = 231

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 368 GFRLVFHNLHS-VVARTRVFDAQARVRLCGAIQQARVAVSDAVATA 234
           GF++   N+HS ++ RT+  + + +  +C A++  R  V DA++ A
Sbjct: 101 GFQIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCA 146


>At2g18180.1 68415.m02115 SEC14 cytosolic factor, putative /
           phosphoglyceride transfer protein, putative contains
           Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
           CRAL/TRIO, N-terminussimilar to phosphatidylinositol
           transfer-like protein IV (GI:14486707) [Lotus
           japonicus];
          Length = 558

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 336 RVKVVENQPESNKVIVVDNNNAP-----SCACTRNLEPVCASNGVTYNNECMMRCHGGDH 500
           ++ V+ N+ +S  + ++D +  P     SC C  N   + +  G   N + M R + GDH
Sbjct: 264 KIHVLGNKYQSKLLEIIDASELPEFLGGSCTCADNGGCMRSDKGPWNNPDIMKRVNNGDH 323

Query: 501 LTVVTHEPCNA*KN 542
           +     +  NA +N
Sbjct: 324 ICSKRSQADNAGEN 337


>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
           family protein contains similarity to regulatory protein
           Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
           (6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
          Length = 781

 Score = 27.9 bits (59), Expect(2) = 0.76
 Identities = 22/80 (27%), Positives = 34/80 (42%)
 Frame = +3

Query: 72  PVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVADIQPCICTREIKQVCGSDGV 251
           PV G DG     +C    S     S  +   G  Q VK+ D+Q  +C +++K   G    
Sbjct: 81  PVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLK---GHTST 137

Query: 252 TYGNPCLLNCATQSNPSLSI 311
             G   + NC  +   S+S+
Sbjct: 138 ITG--VMYNCKDEHLASVSV 155



 Score = 21.4 bits (43), Expect(2) = 0.76
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 27 TCEEADPCVCTFIYAPVCGTD 89
          + +  DPCV ++  +P C  +
Sbjct: 27 SADSGDPCVLSYTPSPGCAVN 47


>At2g31770.1 68415.m03879 zinc finger (C3HC4-type RING finger)
           family protein contains a Prosite:PS00518 Zinc finger,
           C3HC4 type (RING finger), signature and Pfam domain,
           PF01485: IBR domain
          Length = 543

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +3

Query: 237 GSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVK-VVENQPESNKVIVVDNNNAPSCA 413
           GS+  +Y   CL +     N S     P  CD   K + +NQ ES     +  N+ P   
Sbjct: 230 GSESSSYDVSCLCSYRFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANSKPCPE 289

Query: 414 CTRNLEPVCASNGVTYNNEC 473
           C R +E     N +T +  C
Sbjct: 290 CKRPIEKNDGCNHMTCSAPC 309


>At2g28830.1 68415.m03505 armadillo/beta-catenin repeat family
           protein / U-box domain-containing protein contains Pfam
           domain, PF00514: Armadillo/beta-catenin-like repeats and
           Pfam, PF04564: U-box domain
          Length = 654

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 429 EPVCASNGVTYNNECMMRCHGGDHLT 506
           +PV  S+G TY  EC+ +   G HLT
Sbjct: 271 DPVIVSSGQTYERECIKKWLEGGHLT 296


>At5g26920.1 68418.m03210 calmodulin-binding protein similar to
           calmodulin-binding protein TCB60 GI:1698548 from
           [Nicotiana tabacum]
          Length = 492

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 360 VGFPQPSLCCRKDPGVRCSSSGS 292
           VG PQ SL C +DPG   + SGS
Sbjct: 301 VGHPQRSLQCPQDPGFVVTCSGS 323


>At4g28630.1 68417.m04093 ABC transporter family protein identical
           to half-molecule ABC transporter ATM1 GI:9964117 from
           [Arabidopsis thaliana]
          Length = 678

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
 Frame = -3

Query: 443 GTDWLQVSCTRTRRCIVVINDNNLIGFRLVFHNLH---SVVARTRVFDAQARVRLCGAIQ 273
           G D  +V+    R CI V+  + ++    +FHN+H          V+DA  R  +   I 
Sbjct: 498 GQDIKEVTLESLRSCIGVVPQDTVLFNDTIFHNIHYGNLSATEEEVYDAARRAVIHDTIM 557

Query: 272 QARVAVSDAVATANL 228
           +     S AV    L
Sbjct: 558 KFPDKYSTAVGERGL 572


>At3g14850.2 68416.m01876 expressed protein
          Length = 321

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 246 GVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVE 353
           GV +G P   +C  Q  P L  ++PG     V V++
Sbjct: 223 GVLWGEPAAKSCVGQKEPLLGTKYPGGLPAEVGVLK 258


>At3g14850.1 68416.m01877 expressed protein
          Length = 253

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 246 GVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVE 353
           GV +G P   +C  Q  P L  ++PG     V V++
Sbjct: 155 GVLWGEPAAKSCVGQKEPLLGTKYPGGLPAEVGVLK 190


>At5g44120.3 68418.m05400 12S seed storage protein (CRA1) nearly
           identical to SP|P15455 [Plant Mol Biol 11:805-820
           (1988)]; contains Pfam profile PF00190 Cupin and Prosite
           11-S plant seed storage proteins signature PS00305
          Length = 472

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 66  YAPVCGTDGNTYPNKCSLECSRPLAPSLEMKHRGECQEVKVAD 194
           YA   G  G  +PN+C L+    L PS  +K   E   ++V D
Sbjct: 21  YAAQQGQQGQQFPNECQLDQLNALEPSHVLK--SEAGRIEVWD 61


>At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type
           family protein contains Pfam domain PF00050: Kazal-type
           serine protease inhibitor domain
          Length = 144

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 156 KHRGE-CQEVKVADIQPCICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPCD 332
           K+RGE C+ +      P  C R    VCG D VTY   C   CA      + +   G CD
Sbjct: 56  KNRGEFCEGIAKPASCPVQCFRP-DPVCGEDSVTYW--C--GCADALCHGVRVVKQGACD 110


>At5g58080.1 68418.m07268 two-component responsive regulator family
           protein / response regulator family protein contains
           Pfam profile: PF00072 response regulator receiver domain
          Length = 581

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 276 NCATQSNPSLSIEHPGPCDNRV 341
           NC   +NP  +IE+P P DN V
Sbjct: 477 NCTMLNNPFGNIEYPLPADNMV 498


>At3g51560.1 68416.m05646 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1253

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 247  PSLPQTCLISRVQIHGCISATLTSW 173
            P+LPQ+  +  + +HGC+S    SW
Sbjct: 983  PALPQS--LKLLNVHGCVSLESVSW 1005


>At3g48500.1 68416.m05294 expressed protein 
          Length = 668

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 60  FIYAPVCGTDGNTYPNKCSLECSRPLAP 143
           F + P+   DG+T P++   +C RP  P
Sbjct: 354 FDFPPIFHRDGDTNPDEIRRDCGRPPEP 381


>At2g39770.1 68415.m04883 GDP-mannose  pyrophosphorylase (GMP1)
           identical to GDP-mannose pyrophosphorylase from
           Arabidopsis thaliana [GI:3598958]; updated per Conklin
           PL et al, PNAS 1999, 96(7):4198-203
          Length = 361

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 217 RVQIHGCISATLTSWHS 167
           R++ H CIS+++  WHS
Sbjct: 297 RIKKHACISSSIIGWHS 313


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,537,552
Number of Sequences: 28952
Number of extensions: 295663
Number of successful extensions: 804
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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