Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K12
         (318 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   0.33 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   1.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   3.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   3.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   4.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   4.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    20   7.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   7.2  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   7.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   7.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   7.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   7.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   9.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    19   9.5  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 133 KAAYDDFVKHAEEVQKK 183
           +AAY+D VKH E ++++
Sbjct: 167 RAAYEDIVKHLERLREE 183


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 116
           + A ++P+H    P PG G +   G D T+
Sbjct: 47  QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 43  IQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAA 141
           +   L  + +    V  N+ +T QK+AP+L  A
Sbjct: 524 LPTVLSMANDKVANVRFNVAKTLQKIAPQLDQA 556


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 39  RHPEHTKGEPEPGEGSRRQHGSDLTE 116
           ++P+H    P PG G +   G D T+
Sbjct: 7   QYPQHPYAAPAPGHGLQPTMG-DYTQ 31


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 80 FARFWLSFSVFWMAV 36
          FA+FW++ ++F + V
Sbjct: 2  FAKFWVNLALFCLHV 16


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 124 APVSVRSDPC*RRLPSPGSGSPLV 53
           AP+   + P  R +PSP   SP++
Sbjct: 64  APIRPVALPPKREIPSPKRSSPIL 87


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 36  NRHPEHTKGEPEPGEGSRRQHGSDLTETGA 125
           NR  +  K     GEG     G D++  G+
Sbjct: 292 NRRMKWKKENKTKGEGGSEGGGDDISPQGS 321


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 105 LIHVDADFLRQVL 67
           LIH D  FLR ++
Sbjct: 370 LIHTDTYFLRDII 382


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 105 LIHVDADFLRQVL 67
           LIH D  FLR ++
Sbjct: 372 LIHTDTYFLRDII 384


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 105 LIHVDADFLRQVL 67
           LIH D  FLR ++
Sbjct: 370 LIHTDTYFLRDII 382


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 105 LIHVDADFLRQVL 67
           LIH D  FLR ++
Sbjct: 372 LIHTDTYFLRDII 384


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 36  NRHPEHTKGEPEPGEGSRRQHGSDLTETGA 125
           NR  +  K     GEG     G D++  G+
Sbjct: 294 NRRMKWKKENKTKGEGGSEGGGDDISPQGS 323


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 63  EPEPGEGSRRQHG 101
           EP+P +   R+HG
Sbjct: 100 EPQPSQHCPRKHG 112


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 222 RPARCSLSPIQFLYN 266
           RP   SLSP   +YN
Sbjct: 272 RPKSASLSPPPHVYN 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,593
Number of Sequences: 336
Number of extensions: 878
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)