Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K12
(318 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52300.1 68416.m05748 ATP synthase D chain-related contains w... 31 0.17
At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P... 31 0.17
At4g04130.1 68417.m00583 Ulp1 protease family protein contains P... 28 1.6
At4g03400.1 68417.m00462 auxin-responsive GH3 family protein sim... 28 1.6
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 28 1.6
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 27 2.7
At5g11430.1 68418.m01335 transcription elongation factor-related... 27 3.6
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 27 3.6
At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase, pu... 26 4.8
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 26 4.8
At3g28790.1 68416.m03593 expressed protein 26 4.8
At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing ... 26 6.3
At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7... 26 6.3
At2g32160.2 68415.m03931 expressed protein 25 8.3
At2g32160.1 68415.m03930 expressed protein 25 8.3
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 25 8.3
>At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak
similarity to ATP synthase D chain, mitochondrial (EC
3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]
Length = 168
Score = 31.1 bits (67), Expect = 0.17
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +1
Query: 16 ALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQK 180
AL +L+ A Q +LKES+ L KE+ ++ + S+KL+ Y F KH E +K
Sbjct: 105 ALLVELKEAEQKSLKESERLEKEI-ADVQEISKKLSTMTADEY--FEKHPELKKK 156
>At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC
[Arabidopsis thaliana] gi|1483213|emb|CAA65334
Length = 313
Score = 31.1 bits (67), Expect = 0.17
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 79 KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK 204
+E+G + + ++ K + F++ AEEV++++ EAA K
Sbjct: 93 REIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIEEAAEK 134
>At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At3g42690
Length = 1200
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 157 KHAEEVQKKVHEAATKQ*RALIARRVALSLRYN 255
K A V K VH+ KQ LI + L+LRYN
Sbjct: 514 KAATPVGKTVHKKTAKQDATLIKQAPLLNLRYN 546
>At4g03400.1 68417.m00462 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 591
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 52 TLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVH 189
T+ +N K++ +D+ SQ L+ +A DF HA+ + + H
Sbjct: 446 TINIDKNTEKDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGH 491
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 27.9 bits (59), Expect = 1.6
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +1
Query: 1 EKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQK-----LAPKLKAAYDDFVK 159
E Q T E KLQ+A+Q+ E + LAKE+ + D ++ L L+ D+
Sbjct: 955 ETQVTKSEEILKLQSALQDMQLEFEELAKELEMTNDLAAENEQLKDLVSSLQRKIDESDS 1014
Query: 160 HAEEVQKKVHEAATKQ*RALIARRVALSL 246
EE K+ E KQ +I + V + L
Sbjct: 1015 KYEET-SKLSEERVKQEVPVIDQGVIIKL 1042
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 15 RITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGI 143
R RE H H + P P G R+ TE+G + + +
Sbjct: 36 RYQREEYRNHHLHGRARPVPEIGDNRESSDTRTESGHRPRASV 78
>At5g11430.1 68418.m01335 transcription elongation factor-related
contains weak similarity to transcription elongation
factors
Length = 871
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PEPGEGSRRQHGSDLTETGAKT 131
P+PG GS+RQH S + G+KT
Sbjct: 688 PKPGSGSKRQH-SFSSSIGSKT 708
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 26.6 bits (56), Expect = 3.6
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 4 KQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 183
K+A ++ + L E+ AKE +M +++ A KLK + K A+E K+
Sbjct: 183 KEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLKEEAERESKSAKEKIKE 242
Query: 184 VHEAA-TKQ*RALIARRVALSLRYNS 258
+E A +K L + + S Y+S
Sbjct: 243 SYETAKSKADETLESAKDKASQSYDS 268
>At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase,
putative / inositol polyphosphate 1-phosphatase,
putative similar to SP|Q42546 3'(2'),5'-bisphosphate
nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana};
contains Pfam profile PF00459: Inositol monophosphatase
family
Length = 357
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 28 KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 183
K+ A N L S+ + + T+QKL P+L A + +K EE ++K
Sbjct: 299 KVTDAAGNPLDFSKGKYLDYKRGIVVTTQKLLPRLLTAVRESIKEEEEEEEK 350
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 19 LHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQ 177
LH+K + Q+T +E ++ KEV + + +++ + DD V+ E Q
Sbjct: 470 LHDKWEEMAQSTTQEPEDACKEVRCIEVNSGEAERVQIQDSLDDIVEKKEYEQ 522
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 25 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 168
EKL+T++ + K S + AKE+ M + K+A + F K E
Sbjct: 475 EKLKTSMSASAKLSTSNAKELVTGMRSAASKIAEAMMFVSSRFSKSEE 522
>At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing
protein similar to nucleolin protein; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 495
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 6 TSHRITREAANRHPEHTKGEPEPGEGSRRQHG 101
TS +E RH E TK PG+G +R G
Sbjct: 303 TSTEQLKELFQRHGEVTKIVTPPGKGGKRDFG 334
>At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7)
(SOS1) identical to putative Na+/H+ antiporter SOS1
[Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of
The Monovalent Cation:Proton Antiporter (CPA1) Family,
PMID:11500563
Length = 1146
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 1 EKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQK 180
EK+ LH+ +QT ++ L+ + + K ++ TS L+ L A+ + +KH+++
Sbjct: 703 EKEIAHLHDAVQTGLKKLLR-NPPIVKLPKLSDMITSHPLSVALPPAFCEPLKHSKKEPM 761
Query: 181 KV 186
K+
Sbjct: 762 KL 763
>At2g32160.2 68415.m03931 expressed protein
Length = 449
Score = 25.4 bits (53), Expect = 8.3
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 61 ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK---Q*RALIARR 231
+ + ++++ + K P + +AY ++ K AEE KK + K +AL+
Sbjct: 34 DEEKISRKKNPEEEALEAKCLPGIISAYLNYPKAAEENLKKCERSYQKLSPAHKALVTHF 93
Query: 232 VALSLRYNSCIIICNKHF 285
R CI++ N HF
Sbjct: 94 PMKLQRLRRCILM-NSHF 110
>At2g32160.1 68415.m03930 expressed protein
Length = 415
Score = 25.4 bits (53), Expect = 8.3
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 61 ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK---Q*RALIARR 231
+ + ++++ + K P + +AY ++ K AEE KK + K +AL+
Sbjct: 34 DEEKISRKKNPEEEALEAKCLPGIISAYLNYPKAAEENLKKCERSYQKLSPAHKALVTHF 93
Query: 232 VALSLRYNSCIIICNKHF 285
R CI++ N HF
Sbjct: 94 PMKLQRLRRCILM-NSHF 110
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 EKQATALHEKLQTAIQNTLKESQNLAKEV--GVNMDQTSQKLAPKLKAAYDDFVKHAEEV 174
E+ + + + Q+ + ++ ++ K V M T++K ++K D+ K EEV
Sbjct: 427 ERVDSTILNRFQSLSEKLEEKHKSYEKTVVEATKMLLTAKKCVVEMKKEKDEMAKEKEEV 486
Query: 175 QKKV 186
+KK+
Sbjct: 487 EKKL 490
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,437,329
Number of Sequences: 28952
Number of extensions: 76898
Number of successful extensions: 279
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 340508912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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