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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K12
         (318 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52300.1 68416.m05748 ATP synthase D chain-related contains w...    31   0.17 
At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P...    31   0.17 
At4g04130.1 68417.m00583 Ulp1 protease family protein contains P...    28   1.6  
At4g03400.1 68417.m00462 auxin-responsive GH3 family protein sim...    28   1.6  
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:...    28   1.6  
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa...    27   2.7  
At5g11430.1 68418.m01335 transcription elongation factor-related...    27   3.6  
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont...    27   3.6  
At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase, pu...    26   4.8  
At4g24170.1 68417.m03468 kinesin motor family protein contains P...    26   4.8  
At3g28790.1 68416.m03593 expressed protein                             26   4.8  
At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing ...    26   6.3  
At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7...    26   6.3  
At2g32160.2 68415.m03931 expressed protein                             25   8.3  
At2g32160.1 68415.m03930 expressed protein                             25   8.3  
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m...    25   8.3  

>At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak
           similarity to ATP synthase D chain, mitochondrial (EC
           3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus]
          Length = 168

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = +1

Query: 16  ALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQK 180
           AL  +L+ A Q +LKES+ L KE+  ++ + S+KL+      Y  F KH E  +K
Sbjct: 105 ALLVELKEAEQKSLKESERLEKEI-ADVQEISKKLSTMTADEY--FEKHPELKKK 156


>At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC
           [Arabidopsis thaliana] gi|1483213|emb|CAA65334
          Length = 313

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 79  KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK 204
           +E+G  + +  ++   K +     F++ AEEV++++ EAA K
Sbjct: 93  REIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIEEAAEK 134


>At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At2g11345,  At3g42690
          Length = 1200

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 157 KHAEEVQKKVHEAATKQ*RALIARRVALSLRYN 255
           K A  V K VH+   KQ   LI +   L+LRYN
Sbjct: 514 KAATPVGKTVHKKTAKQDATLIKQAPLLNLRYN 546


>At4g03400.1 68417.m00462 auxin-responsive GH3 family protein
           similar to auxin-responsive GH3 product [Glycine max]
           GI:18591; contains Pfam profile PF03321: GH3
           auxin-responsive promoter
          Length = 591

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 52  TLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVH 189
           T+   +N  K++   +D+ SQ L+   +A   DF  HA+ + +  H
Sbjct: 446 TINIDKNTEKDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGH 491


>At2g33240.1 68415.m04072 myosin, putative similar to myosin
            (GI:433663) [Arabidopsis thaliana]; myosin my5A
            (SP:Q02440) {Gallus gallus}
          Length = 1770

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
 Frame = +1

Query: 1    EKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQK-----LAPKLKAAYDDFVK 159
            E Q T   E  KLQ+A+Q+   E + LAKE+ +  D  ++      L   L+   D+   
Sbjct: 955  ETQVTKSEEILKLQSALQDMQLEFEELAKELEMTNDLAAENEQLKDLVSSLQRKIDESDS 1014

Query: 160  HAEEVQKKVHEAATKQ*RALIARRVALSL 246
              EE   K+ E   KQ   +I + V + L
Sbjct: 1015 KYEET-SKLSEERVKQEVPVIDQGVIIKL 1042


>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 634

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +3

Query: 15  RITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGI 143
           R  RE    H  H +  P P  G  R+     TE+G +  + +
Sbjct: 36  RYQREEYRNHHLHGRARPVPEIGDNRESSDTRTESGHRPRASV 78


>At5g11430.1 68418.m01335 transcription elongation factor-related
           contains weak similarity to transcription elongation
           factors
          Length = 871

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 66  PEPGEGSRRQHGSDLTETGAKT 131
           P+PG GS+RQH S  +  G+KT
Sbjct: 688 PKPGSGSKRQH-SFSSSIGSKT 708


>At3g17520.1 68416.m02238 late embryogenesis abundant
           domain-containing protein / LEA domain-containing
           protein low similarity to PIR|S04045|S04045 embryonic
           abundant protein D-29 [Gossypium hirsutum]; contains
           Pfam profile PF02987: Late embryogenesis abundant
           protein
          Length = 298

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +1

Query: 4   KQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 183
           K+A    ++     +  L E+   AKE   +M   +++ A KLK   +   K A+E  K+
Sbjct: 183 KEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLKEEAERESKSAKEKIKE 242

Query: 184 VHEAA-TKQ*RALIARRVALSLRYNS 258
            +E A +K    L + +   S  Y+S
Sbjct: 243 SYETAKSKADETLESAKDKASQSYDS 268


>At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase,
           putative / inositol polyphosphate 1-phosphatase,
           putative similar to SP|Q42546 3'(2'),5'-bisphosphate
           nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana};
           contains Pfam profile PF00459: Inositol monophosphatase
           family
          Length = 357

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 28  KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 183
           K+  A  N L  S+    +    +  T+QKL P+L  A  + +K  EE ++K
Sbjct: 299 KVTDAAGNPLDFSKGKYLDYKRGIVVTTQKLLPRLLTAVRESIKEEEEEEEK 350


>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
           domain, PF00225: Kinesin motor domain
          Length = 1004

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +1

Query: 19  LHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQ 177
           LH+K +   Q+T +E ++  KEV      + +    +++ + DD V+  E  Q
Sbjct: 470 LHDKWEEMAQSTTQEPEDACKEVRCIEVNSGEAERVQIQDSLDDIVEKKEYEQ 522


>At3g28790.1 68416.m03593 expressed protein 
          Length = 608

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 25  EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 168
           EKL+T++  + K S + AKE+   M   + K+A  +      F K  E
Sbjct: 475 EKLKTSMSASAKLSTSNAKELVTGMRSAASKIAEAMMFVSSRFSKSEE 522


>At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing
           protein similar to nucleolin protein; contains InterPro
           entry IPR000504: RNA-binding region RNP-1 (RNA
           recognition motif) (RRM)
          Length = 495

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 6   TSHRITREAANRHPEHTKGEPEPGEGSRRQHG 101
           TS    +E   RH E TK    PG+G +R  G
Sbjct: 303 TSTEQLKELFQRHGEVTKIVTPPGKGGKRDFG 334


>At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7)
           (SOS1) identical to putative Na+/H+ antiporter SOS1
           [Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of
           The Monovalent Cation:Proton Antiporter (CPA1) Family,
           PMID:11500563
          Length = 1146

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 16/62 (25%), Positives = 34/62 (54%)
 Frame = +1

Query: 1   EKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQK 180
           EK+   LH+ +QT ++  L+ +  + K   ++   TS  L+  L  A+ + +KH+++   
Sbjct: 703 EKEIAHLHDAVQTGLKKLLR-NPPIVKLPKLSDMITSHPLSVALPPAFCEPLKHSKKEPM 761

Query: 181 KV 186
           K+
Sbjct: 762 KL 763


>At2g32160.2 68415.m03931 expressed protein
          Length = 449

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = +1

Query: 61  ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK---Q*RALIARR 231
           + + ++++     +    K  P + +AY ++ K AEE  KK   +  K     +AL+   
Sbjct: 34  DEEKISRKKNPEEEALEAKCLPGIISAYLNYPKAAEENLKKCERSYQKLSPAHKALVTHF 93

Query: 232 VALSLRYNSCIIICNKHF 285
                R   CI++ N HF
Sbjct: 94  PMKLQRLRRCILM-NSHF 110


>At2g32160.1 68415.m03930 expressed protein
          Length = 415

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = +1

Query: 61  ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK---Q*RALIARR 231
           + + ++++     +    K  P + +AY ++ K AEE  KK   +  K     +AL+   
Sbjct: 34  DEEKISRKKNPEEEALEAKCLPGIISAYLNYPKAAEENLKKCERSYQKLSPAHKALVTHF 93

Query: 232 VALSLRYNSCIIICNKHF 285
                R   CI++ N HF
Sbjct: 94  PMKLQRLRRCILM-NSHF 110


>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
           myosin heavy chain (GI:1850913) [Entamoeba histolytica];
           similar to Intracellular protein transport protein USO1
           (Swiss-Prot:P25386) [Saccharomyces cerevisiae]
          Length = 555

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 1   EKQATALHEKLQTAIQNTLKESQNLAKEV--GVNMDQTSQKLAPKLKAAYDDFVKHAEEV 174
           E+  + +  + Q+  +   ++ ++  K V     M  T++K   ++K   D+  K  EEV
Sbjct: 427 ERVDSTILNRFQSLSEKLEEKHKSYEKTVVEATKMLLTAKKCVVEMKKEKDEMAKEKEEV 486

Query: 175 QKKV 186
           +KK+
Sbjct: 487 EKKL 490


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,437,329
Number of Sequences: 28952
Number of extensions: 76898
Number of successful extensions: 279
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 340508912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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