BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K12 (318 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g52300.1 68416.m05748 ATP synthase D chain-related contains w... 31 0.17 At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P... 31 0.17 At4g04130.1 68417.m00583 Ulp1 protease family protein contains P... 28 1.6 At4g03400.1 68417.m00462 auxin-responsive GH3 family protein sim... 28 1.6 At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 28 1.6 At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 27 2.7 At5g11430.1 68418.m01335 transcription elongation factor-related... 27 3.6 At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 27 3.6 At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase, pu... 26 4.8 At4g24170.1 68417.m03468 kinesin motor family protein contains P... 26 4.8 At3g28790.1 68416.m03593 expressed protein 26 4.8 At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing ... 26 6.3 At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7... 26 6.3 At2g32160.2 68415.m03931 expressed protein 25 8.3 At2g32160.1 68415.m03930 expressed protein 25 8.3 At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 25 8.3 >At3g52300.1 68416.m05748 ATP synthase D chain-related contains weak similarity to ATP synthase D chain, mitochondrial (EC 3.6.3.14) (Swiss-Prot:P31399) [Rattus norvegicus] Length = 168 Score = 31.1 bits (67), Expect = 0.17 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = +1 Query: 16 ALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQK 180 AL +L+ A Q +LKES+ L KE+ ++ + S+KL+ Y F KH E +K Sbjct: 105 ALLVELKEAEQKSLKESERLEKEI-ADVQEISKKLSTMTADEY--FEKHPELKKK 156 >At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC [Arabidopsis thaliana] gi|1483213|emb|CAA65334 Length = 313 Score = 31.1 bits (67), Expect = 0.17 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = +1 Query: 79 KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK 204 +E+G + + ++ K + F++ AEEV++++ EAA K Sbjct: 93 REIGTRLKEFPEQDLRKARKLVSSFIRAAEEVEERIEEAAEK 134 >At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At2g11345, At3g42690 Length = 1200 Score = 27.9 bits (59), Expect = 1.6 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 Query: 157 KHAEEVQKKVHEAATKQ*RALIARRVALSLRYN 255 K A V K VH+ KQ LI + L+LRYN Sbjct: 514 KAATPVGKTVHKKTAKQDATLIKQAPLLNLRYN 546 >At4g03400.1 68417.m00462 auxin-responsive GH3 family protein similar to auxin-responsive GH3 product [Glycine max] GI:18591; contains Pfam profile PF03321: GH3 auxin-responsive promoter Length = 591 Score = 27.9 bits (59), Expect = 1.6 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = +1 Query: 52 TLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVH 189 T+ +N K++ +D+ SQ L+ +A DF HA+ + + H Sbjct: 446 TINIDKNTEKDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGH 491 >At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:433663) [Arabidopsis thaliana]; myosin my5A (SP:Q02440) {Gallus gallus} Length = 1770 Score = 27.9 bits (59), Expect = 1.6 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Frame = +1 Query: 1 EKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQK-----LAPKLKAAYDDFVK 159 E Q T E KLQ+A+Q+ E + LAKE+ + D ++ L L+ D+ Sbjct: 955 ETQVTKSEEILKLQSALQDMQLEFEELAKELEMTNDLAAENEQLKDLVSSLQRKIDESDS 1014 Query: 160 HAEEVQKKVHEAATKQ*RALIARRVALSL 246 EE K+ E KQ +I + V + L Sbjct: 1015 KYEET-SKLSEERVKQEVPVIDQGVIIKL 1042 >At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 634 Score = 27.1 bits (57), Expect = 2.7 Identities = 12/43 (27%), Positives = 18/43 (41%) Frame = +3 Query: 15 RITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGI 143 R RE H H + P P G R+ TE+G + + + Sbjct: 36 RYQREEYRNHHLHGRARPVPEIGDNRESSDTRTESGHRPRASV 78 >At5g11430.1 68418.m01335 transcription elongation factor-related contains weak similarity to transcription elongation factors Length = 871 Score = 26.6 bits (56), Expect = 3.6 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 66 PEPGEGSRRQHGSDLTETGAKT 131 P+PG GS+RQH S + G+KT Sbjct: 688 PKPGSGSKRQH-SFSSSIGSKT 708 >At3g17520.1 68416.m02238 late embryogenesis abundant domain-containing protein / LEA domain-containing protein low similarity to PIR|S04045|S04045 embryonic abundant protein D-29 [Gossypium hirsutum]; contains Pfam profile PF02987: Late embryogenesis abundant protein Length = 298 Score = 26.6 bits (56), Expect = 3.6 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Frame = +1 Query: 4 KQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 183 K+A ++ + L E+ AKE +M +++ A KLK + K A+E K+ Sbjct: 183 KEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLKEEAERESKSAKEKIKE 242 Query: 184 VHEAA-TKQ*RALIARRVALSLRYNS 258 +E A +K L + + S Y+S Sbjct: 243 SYETAKSKADETLESAKDKASQSYDS 268 >At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family Length = 357 Score = 26.2 bits (55), Expect = 4.8 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 28 KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKK 183 K+ A N L S+ + + T+QKL P+L A + +K EE ++K Sbjct: 299 KVTDAAGNPLDFSKGKYLDYKRGIVVTTQKLLPRLLTAVRESIKEEEEEEEK 350 >At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam domain, PF00225: Kinesin motor domain Length = 1004 Score = 26.2 bits (55), Expect = 4.8 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 19 LHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQ 177 LH+K + Q+T +E ++ KEV + + +++ + DD V+ E Q Sbjct: 470 LHDKWEEMAQSTTQEPEDACKEVRCIEVNSGEAERVQIQDSLDDIVEKKEYEQ 522 >At3g28790.1 68416.m03593 expressed protein Length = 608 Score = 26.2 bits (55), Expect = 4.8 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 25 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 168 EKL+T++ + K S + AKE+ M + K+A + F K E Sbjct: 475 EKLKTSMSASAKLSTSNAKELVTGMRSAASKIAEAMMFVSSRFSKSEE 522 >At4g00830.1 68417.m00114 RNA recognition motif (RRM)-containing protein similar to nucleolin protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) Length = 495 Score = 25.8 bits (54), Expect = 6.3 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 6 TSHRITREAANRHPEHTKGEPEPGEGSRRQHG 101 TS +E RH E TK PG+G +R G Sbjct: 303 TSTEQLKELFQRHGEVTKIVTPPGKGGKRDFG 334 >At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7) (SOS1) identical to putative Na+/H+ antiporter SOS1 [Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of The Monovalent Cation:Proton Antiporter (CPA1) Family, PMID:11500563 Length = 1146 Score = 25.8 bits (54), Expect = 6.3 Identities = 16/62 (25%), Positives = 34/62 (54%) Frame = +1 Query: 1 EKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQK 180 EK+ LH+ +QT ++ L+ + + K ++ TS L+ L A+ + +KH+++ Sbjct: 703 EKEIAHLHDAVQTGLKKLLR-NPPIVKLPKLSDMITSHPLSVALPPAFCEPLKHSKKEPM 761 Query: 181 KV 186 K+ Sbjct: 762 KL 763 >At2g32160.2 68415.m03931 expressed protein Length = 449 Score = 25.4 bits (53), Expect = 8.3 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +1 Query: 61 ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK---Q*RALIARR 231 + + ++++ + K P + +AY ++ K AEE KK + K +AL+ Sbjct: 34 DEEKISRKKNPEEEALEAKCLPGIISAYLNYPKAAEENLKKCERSYQKLSPAHKALVTHF 93 Query: 232 VALSLRYNSCIIICNKHF 285 R CI++ N HF Sbjct: 94 PMKLQRLRRCILM-NSHF 110 >At2g32160.1 68415.m03930 expressed protein Length = 415 Score = 25.4 bits (53), Expect = 8.3 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +1 Query: 61 ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATK---Q*RALIARR 231 + + ++++ + K P + +AY ++ K AEE KK + K +AL+ Sbjct: 34 DEEKISRKKNPEEEALEAKCLPGIISAYLNYPKAAEENLKKCERSYQKLSPAHKALVTHF 93 Query: 232 VALSLRYNSCIIICNKHF 285 R CI++ N HF Sbjct: 94 PMKLQRLRRCILM-NSHF 110 >At1g64330.1 68414.m07290 myosin heavy chain-related similar to myosin heavy chain (GI:1850913) [Entamoeba histolytica]; similar to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] Length = 555 Score = 25.4 bits (53), Expect = 8.3 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +1 Query: 1 EKQATALHEKLQTAIQNTLKESQNLAKEV--GVNMDQTSQKLAPKLKAAYDDFVKHAEEV 174 E+ + + + Q+ + ++ ++ K V M T++K ++K D+ K EEV Sbjct: 427 ERVDSTILNRFQSLSEKLEEKHKSYEKTVVEATKMLLTAKKCVVEMKKEKDEMAKEKEEV 486 Query: 175 QKKV 186 +KK+ Sbjct: 487 EKKL 490 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,437,329 Number of Sequences: 28952 Number of extensions: 76898 Number of successful extensions: 279 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 279 length of database: 12,070,560 effective HSP length: 71 effective length of database: 10,014,968 effective search space used: 340508912 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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