BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K11 (606 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307... 30 1.6 08_02_1465 - 27319377-27319405,27319936-27320101,27320336-273204... 30 1.6 09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 28 5.0 03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 28 5.0 01_06_0954 - 33322951-33323606,33324213-33325014 28 5.0 07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 27 8.7 06_01_0854 - 6490425-6491639 27 8.7 02_05_0002 - 24849189-24849825,24850267-24850328 27 8.7 >12_02_0280 - 16729000-16729678,16729948-16730039,16730072-16730772, 16731033-16731144,16731961-16731970,16732954-16733663 Length = 767 Score = 29.9 bits (64), Expect = 1.6 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -2 Query: 461 SLTNKSEERIGHIPRCRVTTLLQTVDHTSCQLIVFAALFGGRKAVS--GFSVREAVFQLS 288 SL + R+G + CRV L+ + + CQ F + + ++ GF VR QLS Sbjct: 397 SLIEPNNNRLGEVVSCRVHDLMLDIILSKCQQENFITVATKQSILNDRGFPVRRLCCQLS 456 Query: 287 ETSLD 273 +L+ Sbjct: 457 YENLE 461 >08_02_1465 - 27319377-27319405,27319936-27320101,27320336-27320444, 27320865-27321448 Length = 295 Score = 29.9 bits (64), Expect = 1.6 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 438 ENRPYSPVSGYYTAPDC*PHKLSTDRICRTF 346 + R ++P+ GY C PHKL + IC F Sbjct: 117 DTRQWAPLPGYPPPHPCYPHKLFSPTICLVF 147 >09_04_0037 + 13992103-13992624,13993001-13993180,13993423-13993691, 13994120-13995773 Length = 874 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 97 IHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESL 222 +HFW + + T+A + L S VP S T YA + T +L Sbjct: 709 LHFWVILFASLITTNAYVMLVSALVP-SYITGYAVVIATTAL 749 >03_02_1010 - 13194002-13194339,13194421-13194573,13194661-13194809, 13194932-13195184,13195282-13195469,13195684-13195841, 13196093-13196307,13196410-13196614 Length = 552 Score = 28.3 bits (60), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 384 VNSLEQCSNPTPGNMADSLFRFIRKGLPCPK 476 V++L QC+ + G M D L F+ LP PK Sbjct: 57 VDALNQCNAISEGIMTDELRSFLELNLPKPK 87 >01_06_0954 - 33322951-33323606,33324213-33325014 Length = 485 Score = 28.3 bits (60), Expect = 5.0 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 90 CINSLLDGVSPCVDPNARGHLASVKNSTNQLVDFICYKDGDRI-ALFIAESGPECLQEKA 266 C SLL S CV + V N+ L F Y++ ++ A + + P CL + Sbjct: 285 CRTSLLKSESSCVRIE---RVFKVHNTQRTLARFEEYREAVKLKASKLPKKHPRCLADGN 341 Query: 267 DSIKTCFTKLKDSFPNAEAANSLSTAEKC 353 + ++ L + A ++SL ++KC Sbjct: 342 ELLRFHGATLSCALGGAAGSSSLCASDKC 370 >07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268, 22582341-22582477,22582567-22582683,22583277-22583440, 22583542-22583756,22583838-22584004,22584206-22584559, 22584647-22584795,22584907-22585030,22585132-22585371, 22585723-22586140,22586297-22586920,22586999-22587183, 22587302-22587412,22587583-22587789,22587869-22587967, 22588063-22588159,22588296-22588384,22588495-22588548, 22588671-22588793,22588872-22588940,22589020-22589089, 22589202-22589260,22589367-22589570,22590032-22590060, 22590375-22590433,22590513-22590634,22591637-22591830, 22591974-22592088 Length = 1680 Score = 27.5 bits (58), Expect = 8.7 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%) Frame = +3 Query: 15 EEAKPNGALDEVFKKYCAKSPQL--NSCINSLLDGVSPCVDPNARGHLASVKNSTNQLVD 188 E K + +++ ++YCA +P L N+ +L ++ +A + K S + V Sbjct: 615 EAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFVR 674 Query: 189 FICYKDGDRIALFIAESGPECLQEKADSIKTCFTKLKDSFPNAEAAN 329 D + A E L+E DSI K+KD FP++ N Sbjct: 675 MNTASDAEECA------PKELLEEIYDSIVQEEIKMKDDFPDSAKTN 715 >06_01_0854 - 6490425-6491639 Length = 404 Score = 27.5 bits (58), Expect = 8.7 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = -2 Query: 422 PRCRVTTLLQTVDHTSCQLIVFAALFGGRKAVSGFSVREAVFQLSETSLD*ISLLLQALR 243 PR +TLL H L F+A K+ F+V E + + D + +++ Sbjct: 15 PRATASTLLSLRHHGLFSLTRFSAAAAAAKSAGHFAVEEYLVATCHLTPDQATKASKSIS 74 Query: 242 TALSDEQSDSVSIFVA 195 S + D+V F+A Sbjct: 75 HLKSPSRPDAVVAFLA 90 >02_05_0002 - 24849189-24849825,24850267-24850328 Length = 232 Score = 27.5 bits (58), Expect = 8.7 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 Query: 133 GSTHGETPSRSELMQLFSCGDFAQYFLNTSSRAPLGLA 20 G+ +TPSR E + F QY N R PLGLA Sbjct: 64 GAATPQTPSRYEAQKRRDWNTFGQYLRN--HRPPLGLA 99 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,718,719 Number of Sequences: 37544 Number of extensions: 291274 Number of successful extensions: 799 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 778 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 799 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1442939384 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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