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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K11
         (606 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307...    30   1.6  
08_02_1465 - 27319377-27319405,27319936-27320101,27320336-273204...    30   1.6  
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936...    28   5.0  
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948...    28   5.0  
01_06_0954 - 33322951-33323606,33324213-33325014                       28   5.0  
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822...    27   8.7  
06_01_0854 - 6490425-6491639                                           27   8.7  
02_05_0002 - 24849189-24849825,24850267-24850328                       27   8.7  

>12_02_0280 -
           16729000-16729678,16729948-16730039,16730072-16730772,
           16731033-16731144,16731961-16731970,16732954-16733663
          Length = 767

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -2

Query: 461 SLTNKSEERIGHIPRCRVTTLLQTVDHTSCQLIVFAALFGGRKAVS--GFSVREAVFQLS 288
           SL   +  R+G +  CRV  L+  +  + CQ   F  +   +  ++  GF VR    QLS
Sbjct: 397 SLIEPNNNRLGEVVSCRVHDLMLDIILSKCQQENFITVATKQSILNDRGFPVRRLCCQLS 456

Query: 287 ETSLD 273
             +L+
Sbjct: 457 YENLE 461


>08_02_1465 -
           27319377-27319405,27319936-27320101,27320336-27320444,
           27320865-27321448
          Length = 295

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 438 ENRPYSPVSGYYTAPDC*PHKLSTDRICRTF 346
           + R ++P+ GY     C PHKL +  IC  F
Sbjct: 117 DTRQWAPLPGYPPPHPCYPHKLFSPTICLVF 147


>09_04_0037 +
           13992103-13992624,13993001-13993180,13993423-13993691,
           13994120-13995773
          Length = 874

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 97  IHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESL 222
           +HFW +   +   T+A + L S  VP S  T YA  + T +L
Sbjct: 709 LHFWVILFASLITTNAYVMLVSALVP-SYITGYAVVIATTAL 749


>03_02_1010 -
           13194002-13194339,13194421-13194573,13194661-13194809,
           13194932-13195184,13195282-13195469,13195684-13195841,
           13196093-13196307,13196410-13196614
          Length = 552

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 384 VNSLEQCSNPTPGNMADSLFRFIRKGLPCPK 476
           V++L QC+  + G M D L  F+   LP PK
Sbjct: 57  VDALNQCNAISEGIMTDELRSFLELNLPKPK 87


>01_06_0954 - 33322951-33323606,33324213-33325014
          Length = 485

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +3

Query: 90  CINSLLDGVSPCVDPNARGHLASVKNSTNQLVDFICYKDGDRI-ALFIAESGPECLQEKA 266
           C  SLL   S CV       +  V N+   L  F  Y++  ++ A  + +  P CL +  
Sbjct: 285 CRTSLLKSESSCVRIE---RVFKVHNTQRTLARFEEYREAVKLKASKLPKKHPRCLADGN 341

Query: 267 DSIKTCFTKLKDSFPNAEAANSLSTAEKC 353
           + ++     L  +   A  ++SL  ++KC
Sbjct: 342 ELLRFHGATLSCALGGAAGSSSLCASDKC 370


>07_03_0918 -
           22581625-22581687,22581773-22581868,22581980-22582268,
           22582341-22582477,22582567-22582683,22583277-22583440,
           22583542-22583756,22583838-22584004,22584206-22584559,
           22584647-22584795,22584907-22585030,22585132-22585371,
           22585723-22586140,22586297-22586920,22586999-22587183,
           22587302-22587412,22587583-22587789,22587869-22587967,
           22588063-22588159,22588296-22588384,22588495-22588548,
           22588671-22588793,22588872-22588940,22589020-22589089,
           22589202-22589260,22589367-22589570,22590032-22590060,
           22590375-22590433,22590513-22590634,22591637-22591830,
           22591974-22592088
          Length = 1680

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
 Frame = +3

Query: 15  EEAKPNGALDEVFKKYCAKSPQL--NSCINSLLDGVSPCVDPNARGHLASVKNSTNQLVD 188
           E  K +  +++  ++YCA +P L  N+    +L      ++ +A   +   K S +  V 
Sbjct: 615 EAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFVR 674

Query: 189 FICYKDGDRIALFIAESGPECLQEKADSIKTCFTKLKDSFPNAEAAN 329
                D +  A        E L+E  DSI     K+KD FP++   N
Sbjct: 675 MNTASDAEECA------PKELLEEIYDSIVQEEIKMKDDFPDSAKTN 715


>06_01_0854 - 6490425-6491639
          Length = 404

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = -2

Query: 422 PRCRVTTLLQTVDHTSCQLIVFAALFGGRKAVSGFSVREAVFQLSETSLD*ISLLLQALR 243
           PR   +TLL    H    L  F+A     K+   F+V E +      + D  +   +++ 
Sbjct: 15  PRATASTLLSLRHHGLFSLTRFSAAAAAAKSAGHFAVEEYLVATCHLTPDQATKASKSIS 74

Query: 242 TALSDEQSDSVSIFVA 195
              S  + D+V  F+A
Sbjct: 75  HLKSPSRPDAVVAFLA 90


>02_05_0002 - 24849189-24849825,24850267-24850328
          Length = 232

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 133 GSTHGETPSRSELMQLFSCGDFAQYFLNTSSRAPLGLA 20
           G+   +TPSR E  +      F QY  N   R PLGLA
Sbjct: 64  GAATPQTPSRYEAQKRRDWNTFGQYLRN--HRPPLGLA 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,718,719
Number of Sequences: 37544
Number of extensions: 291274
Number of successful extensions: 799
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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