BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K11 (606 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41 SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39) 29 2.2 SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13) 29 3.9 SB_19759| Best HMM Match : HATPase_c (HMM E-Value=1.1e-13) 28 5.1 SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1 SB_25464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7 SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33) 28 6.7 SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06) 28 6.7 SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1) 28 6.7 SB_55142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9 SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 27 8.9 SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07) 27 8.9 SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9 >SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 552 Score = 31.9 bits (69), Expect = 0.41 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +3 Query: 312 NAEAANSLSTAEKCGKYDQLTTCVVNSLEQCSNPTPGNMADSLFRFIRKGLPCPKN 479 N+E +NSL + + K+ L T +++ + S+P P N+AD + + L C N Sbjct: 279 NSELSNSLYSYQDSMKFPSLETRLLDIIRSPSDP-PENLADQIVPSLASSLNCSPN 333 >SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39) Length = 566 Score = 29.5 bits (63), Expect = 2.2 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +1 Query: 211 TESLCSSLRAVLSACKRRL-IQSRLVSLS*KTASLTLKPLTAFLPPKS 351 T+ L S + +LS K+ L + +L+SL+ K SLT KPL+ P S Sbjct: 222 TKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKPLSLTKKPLS 269 Score = 27.5 bits (58), Expect = 8.9 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Frame = +1 Query: 7 MKSRRLNLTAL*TRYSKNTVQSHRN*IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSS 186 + + L+LT +K + + ++ + +++ + + T +SL + + + Sbjct: 327 LTKKLLSLTKKPLSLTKKPLSLTKKLLSLTKKLQSLTKKLLSLTKKLLSLTKKLLSLTKK 386 Query: 187 TSYATKME---TESLCSSLRAVLSACKRRL-IQSRLVSLS*KTASLTLKPLT 330 TK T+ L S + LS K+ L + +L+SL+ K SLT KPL+ Sbjct: 387 LQSLTKKLLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKPLS 438 >SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13) Length = 732 Score = 28.7 bits (61), Expect = 3.9 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +3 Query: 225 FIAESGPECLQEKADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKYDQLTTCVVNSLEQC 404 F++ SG E +QE DSI +K + N + +KC D C VN+L + Sbjct: 351 FVSRSGKEAMQEFFDSI----LNIKQALKNCLKQGCIEMKKKC--IDTFNDC-VNTLGKV 403 Query: 405 SNP 413 NP Sbjct: 404 LNP 406 >SB_19759| Best HMM Match : HATPase_c (HMM E-Value=1.1e-13) Length = 295 Score = 28.3 bits (60), Expect = 5.1 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = -2 Query: 494 PVELSVLRARESLTNKSEERIGHIPRCRVTTLLQ 393 P+++ + + RE LT K ++ G IPR ++ + + Sbjct: 138 PIQVMITKGREDLTIKISDKGGGIPRSKIDEVFE 171 >SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1184 Score = 28.3 bits (60), Expect = 5.1 Identities = 19/73 (26%), Positives = 30/73 (41%) Frame = +1 Query: 55 KNTVQSHRN*IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSL 234 K TV++HR + A +S T+ I + + + T + + SS Sbjct: 1078 KETVEAHRTILPALPAVHALSGCDTVPTYVGIGKGTALKTLMADSDSLTLLLVKQQSSSA 1137 Query: 235 RAVLSACKRRLIQ 273 RA+ CKRR Q Sbjct: 1138 RAIAKGCKRRACQ 1150 >SB_25464| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 301 Score = 27.9 bits (59), Expect = 6.7 Identities = 24/97 (24%), Positives = 40/97 (41%) Frame = +3 Query: 66 AKSPQLNSCINSLLDGVSPCVDPNARGHLASVKNSTNQLVDFICYKDGDRIALFIAESGP 245 ++SPQ N + G P P GH+ + S +L I R +F+ S Sbjct: 23 SRSPQFFRPRN-ISTGSMPGSPPRNSGHILQKQASHPELFREISSPSQTRRDVFVMSSDS 81 Query: 246 ECLQEKADSIKTCFTKLKDSFPNAEAANSLSTAEKCG 356 EC E+ + K+C + ++ P ++ST G Sbjct: 82 ECYLEQHPTPKSC-SPQENRSPQFFRTRNISTGSMPG 117 >SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33) Length = 919 Score = 27.9 bits (59), Expect = 6.7 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 156 SVKNSTNQLVDFICYKDGDRIALFIAESGPECLQEKADSIKTCFTKLKDSFPN 314 SV+N T + D+IC D +AL + P L K + ++ + S PN Sbjct: 299 SVRNKTTVINDYICDHSVDLMALTVHWLSPSDLAVKTEMCPQGYSCVLQSRPN 351 >SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06) Length = 543 Score = 27.9 bits (59), Expect = 6.7 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +3 Query: 276 KTCFTKLKDSFPNAEAANSLSTAEKCGKYDQLTTCVVNSLEQCSNPTP 419 K +K DS N+ A + ST CG +Q TC +NSL Q TP Sbjct: 18 KPPISKTSDSTSNSPARETGSTGF-CGLQNQGGTCYLNSLIQTLFLTP 64 >SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1) Length = 505 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 45 EVFKKYCAKSPQLNSCINSLLDGVSPCVDPNARGHLASVKN 167 E +Y +S Q+N+C + + VS C+DP + L V N Sbjct: 197 ETTHRYNCESCQVNNCCSIYENCVSCCLDPKQKELLREVLN 237 >SB_55142| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 500 Score = 27.5 bits (58), Expect = 8.9 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -3 Query: 391 LLTTQVVN*SYLPHFSAVERLLAASALGKLSFSLVKQVLIESAFSCRHSGP 239 ++ V N ++ +F V +L SA K S + +K + E +CR SGP Sbjct: 6 IVVAVVENEAWKKNFENVRPILGPSASTKKSPNPIKGFVPEGTNTCRSSGP 56 >SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) Length = 1080 Score = 27.5 bits (58), Expect = 8.9 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 21/122 (17%) Frame = -3 Query: 340 VERLLAASALGKLSFSLVK-QVLIESAF-SCRHSGPLSAMNKAILSPSL*HMKSTSWLVL 167 + R ++ L K++ S V+ + L E S R + IL+ HM T WL + Sbjct: 430 MRRAMSTQELEKMALSDVRLEPLFEGVLPSDRLPKTVPERAAYILNTDPSHMPGTHWLAV 489 Query: 166 FLT--EARW-------PRAFG----------STHGETPSRSELMQLFSCGDFAQYFLNTS 44 F T + W P A+G S E P R + + CG + Y+L+ Sbjct: 490 FFTPDQCEWFDSFGRPPEAYGQVMTDFCSLRSKRVENPRRLQALSSALCGQYCIYYLHHR 549 Query: 43 SR 38 +R Sbjct: 550 AR 551 >SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07) Length = 785 Score = 27.5 bits (58), Expect = 8.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 36 ALDEVFKKYCAKSPQLNSCINSLLDGVSPCVDPNARGHLASVK 164 AL+ + KKY P L+ + DG C+D + G L S K Sbjct: 149 ALNTMSKKYADCGPALDCIVFHDGDGWRACIDTSETGDLQSCK 191 >SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 116 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = +1 Query: 130 TRTHAAISLQSRTVPTSSS-TSYATK 204 +RTHAA S+ SRT T+S+ TS+ T+ Sbjct: 47 SRTHAAHSMASRTAGTASAETSFITE 72 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,495,506 Number of Sequences: 59808 Number of extensions: 353842 Number of successful extensions: 1021 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 920 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1020 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1475788250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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