Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K11
(606 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39) 29 2.2
SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13) 29 3.9
SB_19759| Best HMM Match : HATPase_c (HMM E-Value=1.1e-13) 28 5.1
SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_25464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33) 28 6.7
SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06) 28 6.7
SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1) 28 6.7
SB_55142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 27 8.9
SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07) 27 8.9
SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 312 NAEAANSLSTAEKCGKYDQLTTCVVNSLEQCSNPTPGNMADSLFRFIRKGLPCPKN 479
N+E +NSL + + K+ L T +++ + S+P P N+AD + + L C N
Sbjct: 279 NSELSNSLYSYQDSMKFPSLETRLLDIIRSPSDP-PENLADQIVPSLASSLNCSPN 333
>SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39)
Length = 566
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 211 TESLCSSLRAVLSACKRRL-IQSRLVSLS*KTASLTLKPLTAFLPPKS 351
T+ L S + +LS K+ L + +L+SL+ K SLT KPL+ P S
Sbjct: 222 TKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKPLSLTKKPLS 269
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +1
Query: 7 MKSRRLNLTAL*TRYSKNTVQSHRN*IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSS 186
+ + L+LT +K + + ++ + +++ + + T +SL + + +
Sbjct: 327 LTKKLLSLTKKPLSLTKKPLSLTKKLLSLTKKLQSLTKKLLSLTKKLLSLTKKLLSLTKK 386
Query: 187 TSYATKME---TESLCSSLRAVLSACKRRL-IQSRLVSLS*KTASLTLKPLT 330
TK T+ L S + LS K+ L + +L+SL+ K SLT KPL+
Sbjct: 387 LQSLTKKLLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKPLS 438
>SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13)
Length = 732
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 225 FIAESGPECLQEKADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKYDQLTTCVVNSLEQC 404
F++ SG E +QE DSI +K + N + +KC D C VN+L +
Sbjct: 351 FVSRSGKEAMQEFFDSI----LNIKQALKNCLKQGCIEMKKKC--IDTFNDC-VNTLGKV 403
Query: 405 SNP 413
NP
Sbjct: 404 LNP 406
>SB_19759| Best HMM Match : HATPase_c (HMM E-Value=1.1e-13)
Length = 295
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -2
Query: 494 PVELSVLRARESLTNKSEERIGHIPRCRVTTLLQ 393
P+++ + + RE LT K ++ G IPR ++ + +
Sbjct: 138 PIQVMITKGREDLTIKISDKGGGIPRSKIDEVFE 171
>SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +1
Query: 55 KNTVQSHRN*IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSL 234
K TV++HR + A +S T+ I + + + T + + SS
Sbjct: 1078 KETVEAHRTILPALPAVHALSGCDTVPTYVGIGKGTALKTLMADSDSLTLLLVKQQSSSA 1137
Query: 235 RAVLSACKRRLIQ 273
RA+ CKRR Q
Sbjct: 1138 RAIAKGCKRRACQ 1150
>SB_25464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 27.9 bits (59), Expect = 6.7
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +3
Query: 66 AKSPQLNSCINSLLDGVSPCVDPNARGHLASVKNSTNQLVDFICYKDGDRIALFIAESGP 245
++SPQ N + G P P GH+ + S +L I R +F+ S
Sbjct: 23 SRSPQFFRPRN-ISTGSMPGSPPRNSGHILQKQASHPELFREISSPSQTRRDVFVMSSDS 81
Query: 246 ECLQEKADSIKTCFTKLKDSFPNAEAANSLSTAEKCG 356
EC E+ + K+C + ++ P ++ST G
Sbjct: 82 ECYLEQHPTPKSC-SPQENRSPQFFRTRNISTGSMPG 117
>SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33)
Length = 919
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 156 SVKNSTNQLVDFICYKDGDRIALFIAESGPECLQEKADSIKTCFTKLKDSFPN 314
SV+N T + D+IC D +AL + P L K + ++ + S PN
Sbjct: 299 SVRNKTTVINDYICDHSVDLMALTVHWLSPSDLAVKTEMCPQGYSCVLQSRPN 351
>SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)
Length = 543
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 276 KTCFTKLKDSFPNAEAANSLSTAEKCGKYDQLTTCVVNSLEQCSNPTP 419
K +K DS N+ A + ST CG +Q TC +NSL Q TP
Sbjct: 18 KPPISKTSDSTSNSPARETGSTGF-CGLQNQGGTCYLNSLIQTLFLTP 64
>SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1)
Length = 505
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 45 EVFKKYCAKSPQLNSCINSLLDGVSPCVDPNARGHLASVKN 167
E +Y +S Q+N+C + + VS C+DP + L V N
Sbjct: 197 ETTHRYNCESCQVNNCCSIYENCVSCCLDPKQKELLREVLN 237
>SB_55142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 391 LLTTQVVN*SYLPHFSAVERLLAASALGKLSFSLVKQVLIESAFSCRHSGP 239
++ V N ++ +F V +L SA K S + +K + E +CR SGP
Sbjct: 6 IVVAVVENEAWKKNFENVRPILGPSASTKKSPNPIKGFVPEGTNTCRSSGP 56
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 27.5 bits (58), Expect = 8.9
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 21/122 (17%)
Frame = -3
Query: 340 VERLLAASALGKLSFSLVK-QVLIESAF-SCRHSGPLSAMNKAILSPSL*HMKSTSWLVL 167
+ R ++ L K++ S V+ + L E S R + IL+ HM T WL +
Sbjct: 430 MRRAMSTQELEKMALSDVRLEPLFEGVLPSDRLPKTVPERAAYILNTDPSHMPGTHWLAV 489
Query: 166 FLT--EARW-------PRAFG----------STHGETPSRSELMQLFSCGDFAQYFLNTS 44
F T + W P A+G S E P R + + CG + Y+L+
Sbjct: 490 FFTPDQCEWFDSFGRPPEAYGQVMTDFCSLRSKRVENPRRLQALSSALCGQYCIYYLHHR 549
Query: 43 SR 38
+R
Sbjct: 550 AR 551
>SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07)
Length = 785
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 36 ALDEVFKKYCAKSPQLNSCINSLLDGVSPCVDPNARGHLASVK 164
AL+ + KKY P L+ + DG C+D + G L S K
Sbjct: 149 ALNTMSKKYADCGPALDCIVFHDGDGWRACIDTSETGDLQSCK 191
>SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +1
Query: 130 TRTHAAISLQSRTVPTSSS-TSYATK 204
+RTHAA S+ SRT T+S+ TS+ T+
Sbjct: 47 SRTHAAHSMASRTAGTASAETSFITE 72
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,506
Number of Sequences: 59808
Number of extensions: 353842
Number of successful extensions: 1021
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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