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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K11
         (606 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.41 
SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39)                   29   2.2  
SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13)                  29   3.9  
SB_19759| Best HMM Match : HATPase_c (HMM E-Value=1.1e-13)             28   5.1  
SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_25464| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33)                 28   6.7  
SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)                   28   6.7  
SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1)                   28   6.7  
SB_55142| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)                  27   8.9  
SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07)          27   8.9  
SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  

>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 552

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +3

Query: 312 NAEAANSLSTAEKCGKYDQLTTCVVNSLEQCSNPTPGNMADSLFRFIRKGLPCPKN 479
           N+E +NSL + +   K+  L T +++ +   S+P P N+AD +   +   L C  N
Sbjct: 279 NSELSNSLYSYQDSMKFPSLETRLLDIIRSPSDP-PENLADQIVPSLASSLNCSPN 333


>SB_24621| Best HMM Match : DUF164 (HMM E-Value=0.39)
          Length = 566

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 211 TESLCSSLRAVLSACKRRL-IQSRLVSLS*KTASLTLKPLTAFLPPKS 351
           T+ L S  + +LS  K+ L +  +L+SL+ K  SLT KPL+    P S
Sbjct: 222 TKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKLLSLTKKPLSLTKKPLS 269



 Score = 27.5 bits (58), Expect = 8.9
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
 Frame = +1

Query: 7   MKSRRLNLTAL*TRYSKNTVQSHRN*IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSS 186
           +  + L+LT      +K  +   +  ++ +    +++ +  + T   +SL  + +  +  
Sbjct: 327 LTKKLLSLTKKPLSLTKKPLSLTKKLLSLTKKLQSLTKKLLSLTKKLLSLTKKLLSLTKK 386

Query: 187 TSYATKME---TESLCSSLRAVLSACKRRL-IQSRLVSLS*KTASLTLKPLT 330
               TK     T+ L S  +  LS  K+ L +  +L+SL+ K  SLT KPL+
Sbjct: 387 LQSLTKKLLSLTKKLLSLTKKPLSLTKKLLSLTKKLLSLTKKLLSLTKKPLS 438


>SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13)
          Length = 732

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +3

Query: 225 FIAESGPECLQEKADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKYDQLTTCVVNSLEQC 404
           F++ SG E +QE  DSI      +K +  N      +   +KC   D    C VN+L + 
Sbjct: 351 FVSRSGKEAMQEFFDSI----LNIKQALKNCLKQGCIEMKKKC--IDTFNDC-VNTLGKV 403

Query: 405 SNP 413
            NP
Sbjct: 404 LNP 406


>SB_19759| Best HMM Match : HATPase_c (HMM E-Value=1.1e-13)
          Length = 295

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -2

Query: 494 PVELSVLRARESLTNKSEERIGHIPRCRVTTLLQ 393
           P+++ + + RE LT K  ++ G IPR ++  + +
Sbjct: 138 PIQVMITKGREDLTIKISDKGGGIPRSKIDEVFE 171


>SB_52463| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1184

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = +1

Query: 55   KNTVQSHRN*IAASIHFWTVSHRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSL 234
            K TV++HR  + A      +S      T+  I   +      + +   T +  +   SS 
Sbjct: 1078 KETVEAHRTILPALPAVHALSGCDTVPTYVGIGKGTALKTLMADSDSLTLLLVKQQSSSA 1137

Query: 235  RAVLSACKRRLIQ 273
            RA+   CKRR  Q
Sbjct: 1138 RAIAKGCKRRACQ 1150


>SB_25464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 301

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 24/97 (24%), Positives = 40/97 (41%)
 Frame = +3

Query: 66  AKSPQLNSCINSLLDGVSPCVDPNARGHLASVKNSTNQLVDFICYKDGDRIALFIAESGP 245
           ++SPQ     N +  G  P   P   GH+   + S  +L   I      R  +F+  S  
Sbjct: 23  SRSPQFFRPRN-ISTGSMPGSPPRNSGHILQKQASHPELFREISSPSQTRRDVFVMSSDS 81

Query: 246 ECLQEKADSIKTCFTKLKDSFPNAEAANSLSTAEKCG 356
           EC  E+  + K+C +  ++  P      ++ST    G
Sbjct: 82  ECYLEQHPTPKSC-SPQENRSPQFFRTRNISTGSMPG 117


>SB_43483| Best HMM Match : RVT_1 (HMM E-Value=9.4e-33)
          Length = 919

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +3

Query: 156 SVKNSTNQLVDFICYKDGDRIALFIAESGPECLQEKADSIKTCFTKLKDSFPN 314
           SV+N T  + D+IC    D +AL +    P  L  K +     ++ +  S PN
Sbjct: 299 SVRNKTTVINDYICDHSVDLMALTVHWLSPSDLAVKTEMCPQGYSCVLQSRPN 351


>SB_20219| Best HMM Match : UCH (HMM E-Value=2.7e-06)
          Length = 543

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +3

Query: 276 KTCFTKLKDSFPNAEAANSLSTAEKCGKYDQLTTCVVNSLEQCSNPTP 419
           K   +K  DS  N+ A  + ST   CG  +Q  TC +NSL Q    TP
Sbjct: 18  KPPISKTSDSTSNSPARETGSTGF-CGLQNQGGTCYLNSLIQTLFLTP 64


>SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1)
          Length = 505

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 45  EVFKKYCAKSPQLNSCINSLLDGVSPCVDPNARGHLASVKN 167
           E   +Y  +S Q+N+C +   + VS C+DP  +  L  V N
Sbjct: 197 ETTHRYNCESCQVNNCCSIYENCVSCCLDPKQKELLREVLN 237


>SB_55142| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 500

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 391 LLTTQVVN*SYLPHFSAVERLLAASALGKLSFSLVKQVLIESAFSCRHSGP 239
           ++   V N ++  +F  V  +L  SA  K S + +K  + E   +CR SGP
Sbjct: 6   IVVAVVENEAWKKNFENVRPILGPSASTKKSPNPIKGFVPEGTNTCRSSGP 56


>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
          Length = 1080

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 21/122 (17%)
 Frame = -3

Query: 340 VERLLAASALGKLSFSLVK-QVLIESAF-SCRHSGPLSAMNKAILSPSL*HMKSTSWLVL 167
           + R ++   L K++ S V+ + L E    S R    +      IL+    HM  T WL +
Sbjct: 430 MRRAMSTQELEKMALSDVRLEPLFEGVLPSDRLPKTVPERAAYILNTDPSHMPGTHWLAV 489

Query: 166 FLT--EARW-------PRAFG----------STHGETPSRSELMQLFSCGDFAQYFLNTS 44
           F T  +  W       P A+G          S   E P R + +    CG +  Y+L+  
Sbjct: 490 FFTPDQCEWFDSFGRPPEAYGQVMTDFCSLRSKRVENPRRLQALSSALCGQYCIYYLHHR 549

Query: 43  SR 38
           +R
Sbjct: 550 AR 551


>SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07)
          Length = 785

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 36  ALDEVFKKYCAKSPQLNSCINSLLDGVSPCVDPNARGHLASVK 164
           AL+ + KKY    P L+  +    DG   C+D +  G L S K
Sbjct: 149 ALNTMSKKYADCGPALDCIVFHDGDGWRACIDTSETGDLQSCK 191


>SB_19060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 116

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +1

Query: 130 TRTHAAISLQSRTVPTSSS-TSYATK 204
           +RTHAA S+ SRT  T+S+ TS+ T+
Sbjct: 47  SRTHAAHSMASRTAGTASAETSFITE 72


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,506
Number of Sequences: 59808
Number of extensions: 353842
Number of successful extensions: 1021
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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