Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K11
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00686-1|AAA03565.1|  544|Homo sapiens putative novel receptor k...    30   5.5  
BC017272-1|AAH17272.1|  589|Homo sapiens G protein-coupled recep...    30   5.5  
BC009277-1|AAH09277.1|  576|Homo sapiens G protein-coupled recep...    30   5.5  
AF040752-1|AAC09274.1|  560|Homo sapiens G protein-coupled recep...    30   5.5  
AF040751-1|AAC09273.1|  589|Homo sapiens G protein-coupled recep...    30   5.5  
AK128044-1|BAC87247.1| 1135|Homo sapiens protein ( Homo sapiens ...    29   9.6  

>U00686-1|AAA03565.1|  544|Homo sapiens putative novel receptor
           kinase protein.
          Length = 544

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 18  EAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 119
           E +P G L  +F+++CA  P+L+ C+ + LDGV+
Sbjct: 26  ERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 56


>BC017272-1|AAH17272.1|  589|Homo sapiens G protein-coupled receptor
           kinase 6 protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 18  EAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 119
           E +P G L  +F+++CA  P+L+ C+ + LDGV+
Sbjct: 58  ERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88


>BC009277-1|AAH09277.1|  576|Homo sapiens G protein-coupled receptor
           kinase 6 protein.
          Length = 576

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 18  EAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 119
           E +P G L  +F+++CA  P+L+ C+ + LDGV+
Sbjct: 58  ERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88


>AF040752-1|AAC09274.1|  560|Homo sapiens G protein-coupled receptor
           kinase 6, splice variant C protein.
          Length = 560

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 18  EAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 119
           E +P G L  +F+++CA  P+L+ C+ + LDGV+
Sbjct: 58  ERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88


>AF040751-1|AAC09273.1|  589|Homo sapiens G protein-coupled receptor
           kinase 6, splice variant B protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +3

Query: 18  EAKPNGALDEVFKKYCAKSPQLNSCINSLLDGVS 119
           E +P G L  +F+++CA  P+L+ C+ + LDGV+
Sbjct: 58  ERQPIGRL--LFREFCATRPELSRCV-AFLDGVA 88


>AK128044-1|BAC87247.1| 1135|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46164 fis, clone TESTI4002799, highly  similar to
            DNA-directed RNA polymerase I 135 kDa polypeptide (EC
            2.7.7.6). ).
          Length = 1135

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 201  KDGDRIALF-IAESGPECLQE-KADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKY-DQL 371
            K GD   +F I   GP  LQ+   D +     KL+   P     N L+T E    Y    
Sbjct: 786  KQGDSSLVFGIKPGGPRVLQKLDDDGLPFIGAKLQYGDPYYSYLN-LNTGESFVMYYKSK 844

Query: 372  TTCVVNSLEQCSNPT 416
              CVV++++ CSN T
Sbjct: 845  ENCVVDNIKVCSNDT 859


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,457,355
Number of Sequences: 237096
Number of extensions: 1630036
Number of successful extensions: 3852
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3852
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)