Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K10
(543 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 204 7e-54
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 168 4e-43
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 31 0.11
SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase |Schizosaccha... 31 0.15
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 27 1.4
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.4
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 3.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.1
SPBC119.04 |mei3||meiosis inducing protein Mei3 |Schizosaccharom... 26 4.1
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 5.5
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 25 7.2
SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual 25 7.2
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 25 7.2
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 7.2
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 9.5
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.5
SPCC126.10 |iah1||isoamyl acetate hydrolytic enzyme Iah1 |Schizo... 25 9.5
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 9.5
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 25 9.5
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 204 bits (498), Expect = 7e-54
Identities = 93/137 (67%), Positives = 115/137 (83%)
Frame = +2
Query: 2 KTDPDSLTTEEKTKFARLNIDPSNIMWNRVVDLNDRYLRKITIGQSPTEKGFTRETAFDI 181
KT+P+ LT EE+ KFARL+I+PS I WNR +D+NDR+LRKITIG++PTEKGFTR+T FD+
Sbjct: 497 KTNPEELTEEEQRKFARLDIEPSTISWNRTLDVNDRFLRKITIGENPTEKGFTRQTGFDL 556
Query: 182 SVASEIMAILSLGNDVDDIKERLANMVVALDKDGNAVTADDLGITGALLVLLRDAFEPTL 361
SVASE M++L+L D+ D++ERL MVVA +K G VTADDLG+ GAL VLL+DA +PTL
Sbjct: 557 SVASECMSVLALATDLKDMRERLGRMVVASNKSGEPVTADDLGVGGALTVLLKDAIKPTL 616
Query: 362 MQTLEGTPVLVHTGPFA 412
MQTLEGTP LVH GPFA
Sbjct: 617 MQTLEGTPALVHAGPFA 633
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 481 GYVATEAGFGSDIGMEKFF 537
GYV TEAGF SDIGMEKFF
Sbjct: 665 GYVVTEAGFASDIGMEKFF 683
Score = 33.1 bits (72), Expect = 0.027
Identities = 18/28 (64%), Positives = 22/28 (78%), Gaps = 3/28 (10%)
Frame = +3
Query: 399 LVHS---LNIAHGCSSILADKIAMKLAG 473
LVH+ NI+ G SSILAD+IA+KLAG
Sbjct: 626 LVHAGPFANISIGASSILADRIALKLAG 653
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 168 bits (409), Expect = 4e-43
Identities = 79/135 (58%), Positives = 104/135 (77%)
Frame = +2
Query: 8 DPDSLTTEEKTKFARLNIDPSNIMWNRVVDLNDRYLRKITIGQSPTEKGFTRETAFDISV 187
D ++ + E +F RLN+DP I NRV+D+NDR+LR I +G++ TEKG R+T+FDISV
Sbjct: 531 DVNNASPELLKEFVRLNVDPDTIECNRVLDVNDRFLRSIEVGKASTEKGHVRKTSFDISV 590
Query: 188 ASEIMAILSLGNDVDDIKERLANMVVALDKDGNAVTADDLGITGALLVLLRDAFEPTLMQ 367
ASE M+IL+L D++D+ RL+ MV+A DK GNA+TA DLG++GAL VLL+DA +P LMQ
Sbjct: 591 ASECMSILALSCDLNDMHSRLSRMVIANDKYGNAITAGDLGVSGALTVLLKDAIKPNLMQ 650
Query: 368 TLEGTPVLVHTGPFA 412
TLEGTP VH GPFA
Sbjct: 651 TLEGTPAFVHAGPFA 665
Score = 39.1 bits (87), Expect = 4e-04
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 481 GYVATEAGFGSDIGMEKFF 537
GYV TEAGF SD+GMEKFF
Sbjct: 696 GYVVTEAGFASDMGMEKFF 714
Score = 33.1 bits (72), Expect = 0.027
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 414 NIAHGCSSILADKIAMKLAG 473
NI+ G SSI+ADKIA+KLAG
Sbjct: 666 NISIGASSIIADKIALKLAG 685
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 92 VDLNDRYLRKITIGQSPTEKGFTRETAFDISVASEIMAILSLGNDVDDIKERLANMVVA 268
+DLN R + T+ PT K FD S EI+++LS +D RL M+ +
Sbjct: 690 IDLNQRVGNRCTLLSVPTSK----NVIFDTSDLLEIISVLSEHPQIDPFSSRLERMLAS 744
>SPAC12G12.06c |||RNA 3'-terminal phosphate cyclase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 363
Score = 30.7 bits (66), Expect = 0.15
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 152 GFTRETAFDIS--VASEIMAILSLGNDVDDIKE--RLANMVVALDKDGNAVTADDLGITG 319
G ET D+ A +++ ++ G VD + L M+++ +D N + LGIT
Sbjct: 261 GEAGETPEDVGSFCAKKLLEVIESGGCVDPYTQPSTLTGMLLS-SEDVNTIVVGQLGITS 319
Query: 320 ALLVLLRD 343
L+V LRD
Sbjct: 320 QLVVFLRD 327
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -1
Query: 324 RAPVIPKSSAVTAFP----SLSRATTMLARRSFISSTSLPKDNIAMISDA 187
R+ P+S+ T P +L+R ++ RRS + S + P+D + M+S A
Sbjct: 32 RSRYTPRSAQRTVTPHKRRALARRNSLARRRSNVFSATTPRDILRMLSRA 81
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 411 ANGPV*TRTGVPSKVCIKVGSNASRNNTRRAPVIPKSSAVTA 286
+NG V + P + V N + N+T + P+ P SS V+A
Sbjct: 260 SNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSA 301
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 26.2 bits (55), Expect = 3.1
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 89 VVDLNDRYLRKITIGQSPTEKGFTRETAFD-----ISVASEIMAILSLGNDVDDIKERLA 253
+ D+ D Y R QS E+ T T D SVA++I + +LG D + E
Sbjct: 92 IPDMQDEYSRDSHSQQSVEEQNNTTNTDEDASVNEFSVAADISDVNTLGKDNSESTEEPV 151
Query: 254 NMV 262
N V
Sbjct: 152 NEV 154
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 336 NNTRRAPVIPKSSAVTAFPSLSRATTMLARRSFISSTSLPKDNIAMI--SDATDISKAVS 163
NNT SSA ++ P+ S ++ A S SS+ +P + +M+ S AT IS + S
Sbjct: 5 NNTSSVDTSLSSSASSSIPASS--SSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSS 62
>SPBC119.04 |mei3||meiosis inducing protein Mei3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 148
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 342 SRNNTRRAPVIPKSSAVTAFPSLSRATTMLARRSFISSTS 223
+R NT R P++S ++ + + T A +FISSTS
Sbjct: 21 NRTNTARRSTSPRTSTGSSSTNTNTKTVDHAGTTFISSTS 60
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 25.4 bits (53), Expect = 5.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -1
Query: 294 VTAFPSLSRATTMLARRSFI----SSTSLPKDNIAMISDATDIS 175
V A P AT+ RRS + + LP++N A I D D+S
Sbjct: 349 VRAHPMKDSATSTALRRSHALGAAADSLLPQENSAQIYDGKDVS 392
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = -2
Query: 311 YPSHQLLQHFRPY----RGPPPC*QDVPLYHPHHCLK 213
+P H+ HF PY R P + VP Y H L+
Sbjct: 219 FPGHRRQTHFAPYYYPQRATSPSLKQVPTYLGTHVLQ 255
>SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 236 IKERLANMVVALDKDGNAVTADDLGITGALLVLLRDAF 349
IKE+ A + D D + VT D G ++ +L+DAF
Sbjct: 29 IKEKSAAGALTKD-DKSPVTIGDFGAQAIVISMLKDAF 65
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 306 KSSAVTAFPSLSRATTMLARRSFISSTS 223
KSS + + P+LS A + LAR S S S
Sbjct: 967 KSSLIDSIPALSPAPSSLARSSVSSQRS 994
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.0 bits (52), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 400 WSIRLTSHTAVHRY*LIRSR*NLLARNGYVATEAGFGSD 516
W+++ S+ HRY + S L +NG+VAT +D
Sbjct: 525 WTMK--SNLVDHRYRIANSEIQALIQNGFVATTQDNSTD 561
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 363 IKVGSNASRNNTRRAPVIPKSSAVTAFPSLSRATTMLARRSFISSTSLPK 214
I V S+ +NNTR++P+ K ++T+ S + T + S++ PK
Sbjct: 35 ISVSSSIIQNNTRKSPL--KRVSITSESSFYKENTFAHHNTTGSNSVGPK 82
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1073
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 2 KTDPDSLTTEEKTKFARLNIDPSNIMWNRVVDLNDRYLRKITIGQSPT 145
+T ++LT K R++ D NI+W + D + KI + PT
Sbjct: 1016 QTKTNALTNHLKYSVIRVDKDNHNIVWGLMGCTLDGNIFKILMPNDPT 1063
>SPCC126.10 |iah1||isoamyl acetate hydrolytic enzyme Iah1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 246
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 86 RVVDLNDRYLRKITI-GQSPTEKGFT 160
+ V +Y ++TI G S T+KGFT
Sbjct: 28 KYVSFQKKYFNRLTIIGDSITQKGFT 53
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = -1
Query: 402 PV*TRTGVPSKVCIKVGSNASRNNTRRAPVIPKSSAVTAFPSLSRATTMLARRSFISSTS 223
P RT VPS++ + AS + A +PK + + S + R ++ S
Sbjct: 475 PSAVRTSVPSQLAAPIPQVASAEQLKLAAEVPKLESQLSQVKKSNDDLQKSSRDVAANLS 534
Query: 222 LPKDNIAMISDATD 181
K ++ I A D
Sbjct: 535 DVKAKVSEIRKAYD 548
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 397 VNENRSAL*GLHQSRLKRVAQQHQKSSCDTQVISCYSISVLIEGHHHVSK 248
V+EN S L + ++ R+ H++ T + +S+ I+GH +SK
Sbjct: 76 VSENVSGLATIKEAN--RLILNHERRDPSTVIKKQFSVPKPIKGHEDISK 123
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,225,968
Number of Sequences: 5004
Number of extensions: 44402
Number of successful extensions: 153
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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