BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K10 (543 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0315 + 16600387-16600557,16600652-16600801,16600874-166008... 192 1e-49 09_06_0055 - 20550889-20551531,20551612-20551889,20552035-205522... 31 0.45 02_02_0609 + 12105616-12106336,12106514-12106646,12107849-121080... 30 1.0 12_02_0674 - 21745321-21746223,21746229-21747608 30 1.4 04_01_0023 + 337349-337741 29 1.8 11_01_0192 - 1523572-1526097 29 2.4 05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468 28 5.5 10_07_0131 + 13258506-13258628,13258737-13258889 27 7.3 10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 27 7.3 08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 27 7.3 01_06_1704 + 39305989-39306186,39306282-39306789,39307094-393071... 27 9.7 >09_04_0315 + 16600387-16600557,16600652-16600801,16600874-16600897, 16601519-16602694,16603120-16603266,16603477-16603752 Length = 647 Score = 192 bits (469), Expect = 1e-49 Identities = 89/137 (64%), Positives = 108/137 (78%) Frame = +2 Query: 2 KTDPDSLTTEEKTKFARLNIDPSNIMWNRVVDLNDRYLRKITIGQSPTEKGFTRETAFDI 181 KTDP+ LT +E +FARL+IDP +I W RV+D+NDR+LRKITIGQ P EKG RET FDI Sbjct: 216 KTDPNELTPDEVRRFARLDIDPESITWRRVMDVNDRFLRKITIGQGPDEKGMVRETGFDI 275 Query: 182 SVASEIMAILSLGNDVDDIKERLANMVVALDKDGNAVTADDLGITGALLVLLRDAFEPTL 361 +VASEIMA+L+L + D++ERL MV+ K G +TADDLG+ GAL VL++DA PTL Sbjct: 276 AVASEIMAVLALTTSLADMRERLGRMVIGNSKAGEPITADDLGVGGALTVLMKDAIHPTL 335 Query: 362 MQTLEGTPVLVHTGPFA 412 MQTLEGTPVLVH GPFA Sbjct: 336 MQTLEGTPVLVHAGPFA 352 Score = 40.7 bits (91), Expect = 7e-04 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 466 LLARNGYVATEAGFGSDIGMEKF 534 L+ + GYV TEAGFGSDIG EKF Sbjct: 370 LVGKGGYVVTEAGFGSDIGTEKF 392 Score = 36.3 bits (80), Expect = 0.016 Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 3/29 (10%) Frame = +3 Query: 399 LVHS---LNIAHGCSSILADKIAMKLAGE 476 LVH+ NIAHG SSI+ADKIA+KL G+ Sbjct: 345 LVHAGPFANIAHGNSSIVADKIALKLVGK 373 >09_06_0055 - 20550889-20551531,20551612-20551889,20552035-20552203, 20552397-20552534,20553945-20553997,20554521-20554574, 20556062-20556295,20556399-20556986,20557065-20557419, 20557494-20557694,20557925-20557998,20558114-20558254, 20558611-20558670,20558750-20558806,20559281-20559318, 20559419-20559578 Length = 1080 Score = 31.5 bits (68), Expect = 0.45 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 308 PSHQLLQHFRPYRGPPPC*QDVPLYHP 228 P+H LL H P+RG P VPL P Sbjct: 827 PNHSLLTHLHPHRGTPSSHHHVPLEWP 853 >02_02_0609 + 12105616-12106336,12106514-12106646,12107849-12108048, 12108184-12108635,12109018-12109323 Length = 603 Score = 30.3 bits (65), Expect = 1.0 Identities = 16/84 (19%), Positives = 37/84 (44%) Frame = -3 Query: 313 DTQVISCYSISVLIEGHHHVSKTFLYIIHIIA*RQYRHDL*RDRYIEGSLTSEAFLSRRL 134 D +C+ + ++ H + S+T +++H ++H + RY F R+L Sbjct: 224 DLDCSNCHLVREMM--HANASRTIYFLVHATGVGSFQHAIVDRRYTATGAEGLHFPGRQL 281 Query: 133 TNRDLTQVSVVQVHNSVPHNIRRI 62 DLT ++ + + N+ ++ Sbjct: 282 LYFDLTNHTIESASDFIASNVEKL 305 >12_02_0674 - 21745321-21746223,21746229-21747608 Length = 760 Score = 29.9 bits (64), Expect = 1.4 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 7/86 (8%) Frame = -1 Query: 393 TRTG-VPSKVC---IKVGSNASRNNTRRAPVIPKSSAVTAFPS---LSRATTMLARRSFI 235 T TG +PS C + + + + +P+ +S ++ PS LS +T + + Sbjct: 567 TATGKIPSTTCTSPLSTATGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTART 626 Query: 234 SSTSLPKDNIAMISDATDISKAVSRV 157 S P D I + A D+S A S++ Sbjct: 627 GELSTPTDKIPTTTRAGDLSTATSKI 652 >04_01_0023 + 337349-337741 Length = 130 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +2 Query: 179 ISVASEIMAILSLGND----VDDIKERLANMVVALDKDGNAVTADDLGITGALLVL 334 ++VASE+ +ILS ND D+ KE ++ L + N T + G L+V+ Sbjct: 10 VNVASEVSSILSKLNDHLAGADEAKEPAGTSIITLAGENNGATMEVAGDVEDLVVV 65 >11_01_0192 - 1523572-1526097 Length = 841 Score = 29.1 bits (62), Expect = 2.4 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -1 Query: 342 SRNNTRRAPVIPKSSAVTAFPSLSRATTMLARRSFISSTSLPKDNIAMISD-ATDI 178 S+N +R A +P +AV F SLSR ARR SLP+ + D ATD+ Sbjct: 2 SKNCSRAAATVPLLAAVVVFLSLSRPFPCEARRD-----SLPRGASIDVEDHATDL 52 >05_06_0085 + 25441460-25443504,25444263-25444536,25445091-25445468 Length = 898 Score = 27.9 bits (59), Expect = 5.5 Identities = 15/66 (22%), Positives = 33/66 (50%) Frame = +2 Query: 125 TIGQSPTEKGFTRETAFDISVASEIMAILSLGNDVDDIKERLANMVVALDKDGNAVTADD 304 T+GQ P++ F + F++ +A S + + D+++ LA V +++ V+ + Sbjct: 833 TVGQKPSKARFYLDDTFEVVTMLSSLADASEPDLMADLEDDLATSVSSIEISDRVVSFSN 892 Query: 305 LGITGA 322 L G+ Sbjct: 893 LRTEGS 898 >10_07_0131 + 13258506-13258628,13258737-13258889 Length = 91 Score = 27.5 bits (58), Expect = 7.3 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 206 ILSLGNDVDDIKERLANMVVALD 274 I SL +VDD+ ERLA ++ A D Sbjct: 55 IRSLHREVDDLSERLAELLAAAD 77 >10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 Length = 1357 Score = 27.5 bits (58), Expect = 7.3 Identities = 22/87 (25%), Positives = 39/87 (44%) Frame = +2 Query: 29 EEKTKFARLNIDPSNIMWNRVVDLNDRYLRKITIGQSPTEKGFTRETAFDISVASEIMAI 208 + K F P I +N+ + D ++ TI KG F V EI A+ Sbjct: 454 KSKMSFQATKRKPKRI-YNKNIRTQDTESKE-TICYKCGLKGHIANRCFKSKVKKEIQAL 511 Query: 209 LSLGNDVDDIKERLANMVVALDKDGNA 289 L ++ +D+KE+L ++ +D D ++ Sbjct: 512 LD--SESEDVKEKLEAILNNIDNDSSS 536 >08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 Length = 1275 Score = 27.5 bits (58), Expect = 7.3 Identities = 22/87 (25%), Positives = 39/87 (44%) Frame = +2 Query: 29 EEKTKFARLNIDPSNIMWNRVVDLNDRYLRKITIGQSPTEKGFTRETAFDISVASEIMAI 208 + K F P I +N+ + D ++ TI KG F V EI A+ Sbjct: 773 KSKMSFQATKRKPKRI-YNKNIRTQDTESKE-TICYKCGLKGHIANRCFKSKVKKEIQAL 830 Query: 209 LSLGNDVDDIKERLANMVVALDKDGNA 289 L ++ +D+KE+L ++ +D D ++ Sbjct: 831 LD--SESEDVKEKLEAILNNIDNDSSS 855 >01_06_1704 + 39305989-39306186,39306282-39306789,39307094-39307137, 39307243-39307398,39307431-39307549,39308176-39308950 Length = 599 Score = 27.1 bits (57), Expect = 9.7 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 402 VHSLNIAHGCSSILADKIAMKLAGEK 479 +HSL I C+S D+ +K AGEK Sbjct: 330 LHSLRIKFICNSRFLDRATVKTAGEK 355 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,671,376 Number of Sequences: 37544 Number of extensions: 299150 Number of successful extensions: 791 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 772 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 790 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1210221432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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