BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K06 (611 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11 SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.9 SB_5056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15) 28 6.9 SB_49814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1 SB_32579| Best HMM Match : 7tm_1 (HMM E-Value=4e-15) 27 9.1 SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 27 9.1 SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 9.1 SB_26456| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.00011) 27 9.1 >SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 344 Score = 65.7 bits (153), Expect = 3e-11 Identities = 33/94 (35%), Positives = 55/94 (58%) Frame = +2 Query: 143 PGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEK 322 P GV RQ I + L LT F++K +A + V+KA+ AQ+ +KW ++ WA+KLA ++K Sbjct: 249 PHGGVCRQAINMKHLSLTDFKIKIGRSARSGPVKKAFEAAQVQDKWEQTAWARKLAMRKK 308 Query: 323 RAQITDYQRIQADVGPC*EESCKNSSV*KLEGES 424 RA + D+ R + + + + V KL+ E+ Sbjct: 309 RATLNDFDRFKLKLAKQKKNRLLRTEVKKLKKEA 342 >SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) Length = 4002 Score = 28.7 bits (61), Expect = 3.9 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Frame = +1 Query: 118 SNTRTY*RSRQW--CFAATNSPQPTPFNKIPPKIPFYS-THTCCQKSVDRRS 264 S T Y + R+W C P+P P K P P Y T C K RR+ Sbjct: 946 SLTNNYDKDRKWGYCRGYPPKPKPPPRPKPRPNTPIYHYTIVGCYKDKSRRA 997 >SB_5056| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 726 Score = 28.3 bits (60), Expect = 5.2 Identities = 17/69 (24%), Positives = 31/69 (44%) Frame = +2 Query: 137 DGPGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANK 316 D G G R + LN +H+ + Y +V + TDA+ + WA+ +W K+ Sbjct: 456 DVSGGGGDRNCVVLNDIHIDI--MDY-------IVPASCTDAEFRQMWAEFEWENKVTVN 506 Query: 317 EKRAQITDY 343 + + +Y Sbjct: 507 TNISDLREY 515 >SB_5414| Best HMM Match : WD40 (HMM E-Value=6.6e-15) Length = 490 Score = 27.9 bits (59), Expect = 6.9 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 436 VSSAKVKSPKAQLKSYARRNPTAKNQQRSNSFVPESSVK*LGQIKE 573 VSS K +SP+ L+S+ + P KN + V E K GQ K+ Sbjct: 269 VSSPKCQSPQQLLRSWLKVTPPRKNSNKHMDDVREEGSK--GQKKQ 312 >SB_49814| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 302 Score = 27.5 bits (58), Expect = 9.1 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +2 Query: 101 VVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRK 247 ++D IDQ + ID S + +R+ Q + K R FTA T +++K Sbjct: 95 IIDQIDQVQNQIDSLNEEASEEILRVEQKYNAKRRPH--FTARTNLIKK 141 >SB_32579| Best HMM Match : 7tm_1 (HMM E-Value=4e-15) Length = 357 Score = 27.5 bits (58), Expect = 9.1 Identities = 24/89 (26%), Positives = 38/89 (42%) Frame = +2 Query: 20 VMPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTK 199 ++P+ YV V ++ LK + V D + + G +GV I L + + Sbjct: 216 ILPYLAYVVYLTVMMI----LKPPVSYVTDFTVRYATAVAGYSNGVLNPVIYLIFMKDAR 271 Query: 200 FRLKYPFTAPTRVVRKAWTDAQLNEKWAK 286 RLK FT RV R +L + W+K Sbjct: 272 ARLKGLFTRRQRVGRHHVAKERLQQTWSK 300 >SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) Length = 803 Score = 27.5 bits (58), Expect = 9.1 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 219 KGYFRRNFVKWSWLRRICCRETPL 148 KG F + FV W+ CCR PL Sbjct: 407 KGMFPKEFVDWNTFVIACCRFLPL 430 >SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) Length = 1572 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 206 LKYPFTAPTRVVRKAWTDAQLNEKWAKS 289 L++ FT PT+V R A Q + +W KS Sbjct: 1112 LEFQFTHPTKVTRVATQGRQDSAQWVKS 1139 >SB_26456| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.00011) Length = 343 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -3 Query: 279 HFSFS*ASVHAFLTTRVGAVKGYFRRNFVKWSW 181 HF ++ V T + AVK YFR + K W Sbjct: 298 HFDYTDLIVSKISRTSIDAVKDYFREDLQKSDW 330 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,803,565 Number of Sequences: 59808 Number of extensions: 344625 Number of successful extensions: 897 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 895 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1499981500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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