Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K06
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81461-2|CAB03835.1| 135|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 3.5
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr... 28 4.6
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 28 6.0
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 28 6.0
AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical ... 28 6.0
AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical ... 28 6.0
U00068-1|AAA50745.1| 85|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical... 27 8.0
>Z81461-2|CAB03835.1| 135|Caenorhabditis elegans Hypothetical
protein C04F12.4 protein.
Length = 135
Score = 91.9 bits (218), Expect = 3e-19
Identities = 46/109 (42%), Positives = 68/109 (62%)
Frame = +2
Query: 23 MPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKF 202
M F R V+ GRV ++ G +GKL +V++ID R IDGP S V+R L L LTKF
Sbjct: 1 MVFNRVVQIGRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKF 60
Query: 203 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQITDYQR 349
LK T+ V+ A+ A++ E + K+QWA+K+A + RA++TD++R
Sbjct: 61 VLKLRVGQRTKGVKAAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDFER 109
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -3
Query: 144 GPSISARV*---SMISTTPTNFPFRGPSETRATRPGS 43
GPS S+ V SMI+TTP PF P+ + PGS
Sbjct: 374 GPSTSSHVTPQMSMINTTPQQPPFSHPNSQQQATPGS 410
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 147 PGPSISARV*SMISTTPTNFPFRGPSETRATRPGST*RAKGMTSSQEP 4
PGPS +++ S I TPT P + A +P + G+ +SQ+P
Sbjct: 1434 PGPSSASKSVSSIRQTPTK--VLDPLSSAAKQPNEPDQTTGLKTSQQP 1479
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -3
Query: 147 PGPSISARV*SMISTTPTNFPFRGPSETRATRPGST*RAKGMTSSQEP 4
PGPS +++ S I TPT P + A +P + G+ +SQ+P
Sbjct: 1434 PGPSSASKSVSSIRQTPTK--VLDPLSSAAKQPNEPDQTTGLKTSQQP 1479
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 448 KVKSPKAQLKSYARRNPTAKNQQRSNS 528
+V SP AQ SYARRN ++ +S S
Sbjct: 1260 RVNSPPAQSTSYARRNDGKRHPSKSRS 1286
>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
protein ZK455.2 protein.
Length = 1118
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 193 NKIP-PKIPFYSTHTCCQKSVDRR 261
N+ P P P+YST T C K+V RR
Sbjct: 53 NRSPSPHEPYYSTRTRCSKNVRRR 76
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 116 DQTRALI-DGPGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQ 292
DQ A++ +G G + R ++ +K +LK TAP V + WT + A S
Sbjct: 1033 DQAAAMMNEGKGQKIKNMLRRNSRRDKSKSKLKIESTAPAAVNPRGWTQPTPSNTSAASV 1092
Query: 293 WAQKLANKEKR 325
+ N ++R
Sbjct: 1093 ESAFCGNYQER 1103
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 116 DQTRALI-DGPGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQ 292
DQ A++ +G G + R ++ +K +LK TAP V + WT + A S
Sbjct: 911 DQAAAMMNEGKGQKIKNMLRRNSRRDKSKSKLKIESTAPAAVNPRGWTQPTPSNTSAASV 970
Query: 293 WAQKLANKEKR 325
+ N ++R
Sbjct: 971 ESAFCGNYQER 981
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 543 AFWHKRITSLLVFCCWV 493
+F+ T LL+FCCWV
Sbjct: 184 SFYFHSATCLLIFCCWV 200
>AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.8 protein.
Length = 292
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 203 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQITDYQRIQADV 364
R+ T T + K + + N K + +K+ K ++I+DYQ +QAD+
Sbjct: 197 RITDKLTFNTTEIYKCNKETESNMKRLQDCLLEKIEQTTKFSKISDYQLLQADI 250
>AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical
protein H27M09.5 protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +1
Query: 421 KRRALVSSAK----VKSPKAQLKSYAR--RNPTAKNQQRSNSFVPESSVK*LGQ--IKEL 576
K+ A +S+ K +K PK K A+ RNP +RSNS PE K + + K+
Sbjct: 273 KKSAKISTKKLISTIKPPKTLSKKSAKSTRNPLKSPSKRSNSVRPEKKNKIISKKASKKN 332
Query: 577 LFSIKKKEK 603
+ S K K K
Sbjct: 333 VESRKSKRK 341
>U00068-1|AAA50745.1| 85|Caenorhabditis elegans Hypothetical
protein W04D12.1 protein.
Length = 85
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 269 NEKWAKSQWAQKLANKEKRAQITDYQRIQAD 361
N KW + A K+A KEK+ ++ D ++ + D
Sbjct: 43 NRKWKRIDSAVKVAKKEKKKKMKDEEKKKED 73
>AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical
protein Y87G2A.13 protein.
Length = 468
Score = 27.5 bits (58), Expect = 8.0
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = -3
Query: 336 VICALFSLFANFCAHWLLAHFSFS*ASVHAFLTTRVGAVKGYFRRNFVKWSWLRRICCRE 157
+I + S F +H L AH + + V A + G VK Y + + + + R +CC
Sbjct: 318 IIGWVLSKFLTRVSH-LQAHLNLAYDKV-AEMRAEAGKVKNYTIQAMI-YRYYRYLCCAA 374
Query: 156 TPLPGPSISARV*SMISTTPTNFPFRG 76
GP++ A + +++ T N + G
Sbjct: 375 LQYFGPAVLALLFALLLKTTGNLSWIG 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,208,836
Number of Sequences: 27780
Number of extensions: 260577
Number of successful extensions: 728
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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