BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K02 (571 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767 29 2.0 11_05_0091 - 18982390-18982948,18983088-18983173 29 2.6 02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 29 3.4 02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 29 3.4 04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 28 4.6 10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282... 28 6.0 10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 28 6.0 09_06_0280 + 22010270-22011407,22011890-22013097 28 6.0 12_02_0246 - 16393943-16394410 27 8.0 11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 27 8.0 04_01_0344 + 4517730-4517918,4518212-4518359,4518454-4518569,451... 27 8.0 >11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767 Length = 355 Score = 29.5 bits (63), Expect = 2.0 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +3 Query: 240 LNPRTKPAPPRSRSW 284 LNPR PAPP +R+W Sbjct: 77 LNPRATPAPPSARTW 91 >11_05_0091 - 18982390-18982948,18983088-18983173 Length = 214 Score = 29.1 bits (62), Expect = 2.6 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +3 Query: 237 NLNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTP 341 +L P P+P + CC G+ NS ++S TP Sbjct: 130 SLQPSPSPSPTPDSATPCCLTGRLADNSTLNSDTP 164 >02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 Length = 519 Score = 28.7 bits (61), Expect = 3.4 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 95 RRITRQALAEAKAIKEQINILVYVAEMVATDPVLAWTKAKELYSSLSQPEPE 250 RRI R E K +KEQIN+L ++ T+ ++ K L LSQ E E Sbjct: 382 RRIDRPETNEEKDLKEQINLL--RVDLKETEANISDEDKKGLSEKLSQMERE 431 >02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628, 6771429-6771465,6773108-6774193,6774337-6774447, 6774701-6774817,6774818-6775120,6776092-6776513, 6776645-6777274 Length = 1029 Score = 28.7 bits (61), Expect = 3.4 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = -1 Query: 412 VGCKRHVLGNKRQALAYVSRQVRVGVVDEMHEFPRGFPGQQH 287 VG HVLG Q A +R+ V+DE E RGF Q H Sbjct: 782 VGTPCHVLG-MLQGRALCPDHIRMFVLDEADEVLRGFKDQIH 822 >04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626, 1848780-1848887,1849001-1849204,1849294-1849525, 1849602-1849751,1849830-1850007,1850416-1850519, 1850611-1850933,1851274-1851459,1851672-1851899 Length = 1020 Score = 28.3 bits (60), Expect = 4.6 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 26 GETGRAKAAQAVQHGARLKRKLQRRITRQALAEA 127 G+ + QAV HG +LK +L R +TR+ E+ Sbjct: 640 GQVYHYPSFQAVTHGDKLKHELSRDLTRETAWES 673 >10_08_0838 - 20927020-20927207,20927288-20927491,20927654-20928297, 20928549-20928788,20928884-20928978,20929087-20929434, 20929824-20930042,20930422-20930487,20931191-20931362, 20931456-20931703,20931933-20932073,20932238-20932330, 20932421-20932471,20933571-20933693,20933793-20934035, 20934131-20934211,20935245-20935340,20935535-20936320, 20936443-20937012,20937322-20937427,20938102-20938206, 20938311-20938432,20939321-20939413,20940081-20940104 Length = 1685 Score = 27.9 bits (59), Expect = 6.0 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 Query: 385 YQAHVFCSRLSSQDGTRGNCYGRDQRLEGKTPNSITAVTIHIQ 513 Y + S +S Q G GNC + G T +S+ + H+Q Sbjct: 1402 YLLLLVASEVSLQSGDHGNCIAQATEALGVTSSSVDSFFAHLQ 1444 >10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 Length = 520 Score = 27.9 bits (59), Expect = 6.0 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 451 DHSSFHGYRLEKRVGCKRHVLGNKRQALAYVSRQ-VRVGVVDEMHEFP 311 DH S HG++ K GC+ ++G + + + V+ + + + E HE P Sbjct: 67 DHHSKHGHKKRKHSGCE--IVGEETRKVCNVTMEHLEKSSLSEEHEAP 112 >09_06_0280 + 22010270-22011407,22011890-22013097 Length = 781 Score = 27.9 bits (59), Expect = 6.0 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +3 Query: 273 SRSWSCC*PGKPRGNSCISSTTPTRTCLETY 365 + +WSC PG+ R ++CIS+ + + Y Sbjct: 279 ANNWSCPTPGEARRSACISNNSYCHNVTDNY 309 >12_02_0246 - 16393943-16394410 Length = 155 Score = 27.5 bits (58), Expect = 8.0 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 421 QDGTRGNCYGRDQRLEGKTPNSITAVTIHIQD 516 QDG N + RL+G TP S+ A + + D Sbjct: 23 QDGLAPNGVHQGHRLDGSTPESLHAAGVRVGD 54 >11_06_0013 - 19252779-19252805,19252947-19253090,19253572-19253663, 19253757-19253835,19253965-19254031,19254163-19254254, 19254986-19255102,19255254-19255365,19255479-19255594, 19255680-19255756,19255912-19255993,19256077-19256214, 19258806-19259009 Length = 448 Score = 27.5 bits (58), Expect = 8.0 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 243 NPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCL 356 +PR P PP + SW C P P G +SS TCL Sbjct: 288 SPRNGPLPPNAPSW-CEAPFDPEG--LLSSLMAIVTCL 322 >04_01_0344 + 4517730-4517918,4518212-4518359,4518454-4518569, 4518917-4518979,4519084-4519152,4519317-4519352 Length = 206 Score = 27.5 bits (58), Expect = 8.0 Identities = 17/53 (32%), Positives = 23/53 (43%) Frame = +3 Query: 198 LGQKPRSYTRL*ANLNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCL 356 +G K Y+ + + TKP +R WS C RGN S+ TR L Sbjct: 105 MGDKDMDYSSI--EYHKPTKPRVRHTRPWSSCIKSSNRGNFHPSTKLRTRVNL 155 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,960,819 Number of Sequences: 37544 Number of extensions: 351847 Number of successful extensions: 1224 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1224 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1317005676 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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