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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K02
         (571 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767           29   2.0  
11_05_0091 - 18982390-18982948,18983088-18983173                       29   2.6  
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530     29   3.4  
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677...    29   3.4  
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184...    28   4.6  
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282...    28   6.0  
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010           28   6.0  
09_06_0280 + 22010270-22011407,22011890-22013097                       28   6.0  
12_02_0246 - 16393943-16394410                                         27   8.0  
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536...    27   8.0  
04_01_0344 + 4517730-4517918,4518212-4518359,4518454-4518569,451...    27   8.0  

>11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767
          Length = 355

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 240 LNPRTKPAPPRSRSW 284
           LNPR  PAPP +R+W
Sbjct: 77  LNPRATPAPPSARTW 91


>11_05_0091 - 18982390-18982948,18983088-18983173
          Length = 214

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 237 NLNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTP 341
           +L P   P+P    +  CC  G+   NS ++S TP
Sbjct: 130 SLQPSPSPSPTPDSATPCCLTGRLADNSTLNSDTP 164


>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
          Length = 519

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +2

Query: 95  RRITRQALAEAKAIKEQINILVYVAEMVATDPVLAWTKAKELYSSLSQPEPE 250
           RRI R    E K +KEQIN+L    ++  T+  ++    K L   LSQ E E
Sbjct: 382 RRIDRPETNEEKDLKEQINLL--RVDLKETEANISDEDKKGLSEKLSQMERE 431


>02_02_0099 +
           6768115-6768285,6769950-6770034,6770501-6770628,
           6771429-6771465,6773108-6774193,6774337-6774447,
           6774701-6774817,6774818-6775120,6776092-6776513,
           6776645-6777274
          Length = 1029

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -1

Query: 412 VGCKRHVLGNKRQALAYVSRQVRVGVVDEMHEFPRGFPGQQH 287
           VG   HVLG   Q  A     +R+ V+DE  E  RGF  Q H
Sbjct: 782 VGTPCHVLG-MLQGRALCPDHIRMFVLDEADEVLRGFKDQIH 822


>04_01_0162 +
           1845295-1846317,1846430-1846565,1848436-1848626,
           1848780-1848887,1849001-1849204,1849294-1849525,
           1849602-1849751,1849830-1850007,1850416-1850519,
           1850611-1850933,1851274-1851459,1851672-1851899
          Length = 1020

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 26  GETGRAKAAQAVQHGARLKRKLQRRITRQALAEA 127
           G+     + QAV HG +LK +L R +TR+   E+
Sbjct: 640 GQVYHYPSFQAVTHGDKLKHELSRDLTRETAWES 673


>10_08_0838 - 20927020-20927207,20927288-20927491,20927654-20928297,
            20928549-20928788,20928884-20928978,20929087-20929434,
            20929824-20930042,20930422-20930487,20931191-20931362,
            20931456-20931703,20931933-20932073,20932238-20932330,
            20932421-20932471,20933571-20933693,20933793-20934035,
            20934131-20934211,20935245-20935340,20935535-20936320,
            20936443-20937012,20937322-20937427,20938102-20938206,
            20938311-20938432,20939321-20939413,20940081-20940104
          Length = 1685

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 385  YQAHVFCSRLSSQDGTRGNCYGRDQRLEGKTPNSITAVTIHIQ 513
            Y   +  S +S Q G  GNC  +     G T +S+ +   H+Q
Sbjct: 1402 YLLLLVASEVSLQSGDHGNCIAQATEALGVTSSSVDSFFAHLQ 1444


>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
          Length = 520

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 451 DHSSFHGYRLEKRVGCKRHVLGNKRQALAYVSRQ-VRVGVVDEMHEFP 311
           DH S HG++  K  GC+  ++G + + +  V+ + +    + E HE P
Sbjct: 67  DHHSKHGHKKRKHSGCE--IVGEETRKVCNVTMEHLEKSSLSEEHEAP 112


>09_06_0280 + 22010270-22011407,22011890-22013097
          Length = 781

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 273 SRSWSCC*PGKPRGNSCISSTTPTRTCLETY 365
           + +WSC  PG+ R ++CIS+ +      + Y
Sbjct: 279 ANNWSCPTPGEARRSACISNNSYCHNVTDNY 309


>12_02_0246 - 16393943-16394410
          Length = 155

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 421 QDGTRGNCYGRDQRLEGKTPNSITAVTIHIQD 516
           QDG   N   +  RL+G TP S+ A  + + D
Sbjct: 23  QDGLAPNGVHQGHRLDGSTPESLHAAGVRVGD 54


>11_06_0013 -
           19252779-19252805,19252947-19253090,19253572-19253663,
           19253757-19253835,19253965-19254031,19254163-19254254,
           19254986-19255102,19255254-19255365,19255479-19255594,
           19255680-19255756,19255912-19255993,19256077-19256214,
           19258806-19259009
          Length = 448

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 NPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCL 356
           +PR  P PP + SW C  P  P G   +SS     TCL
Sbjct: 288 SPRNGPLPPNAPSW-CEAPFDPEG--LLSSLMAIVTCL 322


>04_01_0344 +
           4517730-4517918,4518212-4518359,4518454-4518569,
           4518917-4518979,4519084-4519152,4519317-4519352
          Length = 206

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +3

Query: 198 LGQKPRSYTRL*ANLNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCL 356
           +G K   Y+ +    +  TKP    +R WS C     RGN   S+   TR  L
Sbjct: 105 MGDKDMDYSSI--EYHKPTKPRVRHTRPWSSCIKSSNRGNFHPSTKLRTRVNL 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,960,819
Number of Sequences: 37544
Number of extensions: 351847
Number of successful extensions: 1224
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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