Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K02
         (571 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)               33   0.12 
SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7)                   29   2.0  
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_29994| Best HMM Match : Ank (HMM E-Value=0)                         28   4.7  
SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)              28   4.7  
SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)          28   4.7  
SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)               28   6.2  
SB_43502| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)           27   8.2  
SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)             27   8.2  

>SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)
          Length = 401

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +2

Query: 155 LVYVAEMVATDPVLAWTKAKELYSSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVN 334
           LV +  ++A  PVL W + + + +SLS  E     R            R+   K VHLV 
Sbjct: 163 LVGIGLVLAAFPVLYWNEGRAVQTSLSLDE---GLRAVIPLHSINEINRKNQDKLVHLVG 219

Query: 335 YTHTD 349
           + HTD
Sbjct: 220 HLHTD 224


>SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7)
          Length = 364

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +2

Query: 308 ARKFVHLVNYTH-----TDLPRNVRQGLTL-VTKHMSFAADSLLKTVPVETAMVEIKGWK 469
           A +F+  +NYT       D+P++   G+T      + FAA+    TVPV+  +  I  WK
Sbjct: 122 AGEFLVTINYTSGSWYSVDIPKSAFTGMTWDAVFQLKFAANGAGSTVPVDIYLDNIYFWK 181


>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1090

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 386 TKHMS-FAADSLLKTVPVETAMVEIKGWKE 472
           TK +S F  DS LK V  E+  VE+ GW+E
Sbjct: 819 TKWLSNFVIDSYLKIVKSESTNVEVFGWEE 848


>SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 712

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 399 LLQPTLFSRRYPWKLLWSRSKAGRKNSKFYYSSYNPH 509
           LL+P     RY +K  +    A  +  KFYY+   PH
Sbjct: 139 LLEPVFLKSRYCFKSSYDLVSASLRQWKFYYNVSLPH 175


>SB_29994| Best HMM Match : Ank (HMM E-Value=0)
          Length = 407

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 358 KRTPRLDACYQAHVFCSRLSSQDGTRGN 441
           KRTP  +AC Q +V C+ L    G + N
Sbjct: 260 KRTPLHEACQQGNVLCTTLLLDAGAKPN 287


>SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)
          Length = 528

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 398 SFAADSLLKTVPVETAMVEIKGWKE 472
           +F  DS LK V  E+  VE+ GW+E
Sbjct: 409 NFVIDSYLKIVKSESTNVEVFGWEE 433


>SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)
          Length = 313

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 398 SFAADSLLKTVPVETAMVEIKGWKE 472
           +F  DS LK V  E+  VE+ GW+E
Sbjct: 126 NFVIDSYLKIVKSESTNVEVFGWEE 150


>SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1922

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 398  SFAADSLLKTVPVETAMVEIKGWKE 472
            +F  DS LK V  E+  VE+ GW+E
Sbjct: 1674 NFVIDSYLKIVKSESTNVEVFGWEE 1698


>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 824

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 177 WQRTQC*LGQKPRSYTRL*ANLNPRTKPAPPRSRSWSC 290
           W+  +   G   R +TR    LN R+ P P R+RS +C
Sbjct: 686 WKSNESASGYPSRYHTRSYFLLNNRSTPRPTRARSVTC 723


>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
          Length = 1024

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +2

Query: 17  GVEGETGRAKAAQAVQHGARLKRKLQR--RITRQALAEAKAIKEQINILVYVAEMVATDP 190
           GVEG    A+  Q  Q   RLK  + R   I      + +++++Q+  L      +  D 
Sbjct: 371 GVEGAAANAQVKQLEQQNTRLKEAIVRFKEIQMSDKQQLQSLQKQVKDLHSANTSLQADK 430

Query: 191 VLAWTKAKELYSSLSQ 238
                +A++L S+L++
Sbjct: 431 DQLMEEAEQLESTLAE 446


>SB_43502| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 189

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 414 ESAAKDMCLVTSVKPWRTFLGKSVWV*LTRCTN 316
           +   ++ C  T  KPW + L K  W   TRC +
Sbjct: 106 QDVKEETCENTPTKPWLSLLLKFSWEIFTRCVH 138


>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
          Length = 1207

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +1

Query: 262 PRHARGVGRVADQ----GNREEIRASRQLHPHGLA*KRTPRLDACYQAHVFCSRLSSQDG 429
           P H +G   + DQ    G  +E+  S   H   +    TP+  A Y+ H+   +LS+Q  
Sbjct: 450 PIHQKGTAVLVDQELLNGVEKEVAPSTP-HIVAVPPATTPKKPAIYKFHIRVDKLSTQSD 508

Query: 430 TRGNCYGRDQRLEGK-TPNSIT 492
                + RD   EGK TP   +
Sbjct: 509 QLREEF-RDSYREGKSTPRKFS 529


>SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)
          Length = 495

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 398 SFAADSLLKTVPVETAMVEIKGWKE 472
           +F  DS LK V  E+  VE+ GW+E
Sbjct: 284 NFVIDSHLKIVKSESTNVEVFGWEE 308


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,518,558
Number of Sequences: 59808
Number of extensions: 379489
Number of successful extensions: 1092
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)