Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K02
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022862-1|BAB14278.1|  467|Homo sapiens protein ( Homo sapiens ...    32   1.6  
BC110650-1|AAI10651.1| 1938|Homo sapiens ATG2 autophagy related ...    31   2.2  
AB007864-1|BAA23700.1| 1956|Homo sapiens KIAA0404 protein.             31   2.2  
BC015116-1|AAH15116.1|  309|Homo sapiens uracil phosphoribosyltr...    30   6.6  
AL590234-2|CAI39682.1|  281|Homo sapiens uracil phosphoribosyltr...    30   6.6  
AL590234-1|CAI39681.1|  309|Homo sapiens uracil phosphoribosyltr...    30   6.6  
AL137013-2|CAI40089.1|  281|Homo sapiens uracil phosphoribosyltr...    30   6.6  
AL137013-1|CAI40088.1|  309|Homo sapiens uracil phosphoribosyltr...    30   6.6  

>AK022862-1|BAB14278.1|  467|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar to
           HISTONE H1, GONADAL. ).
          Length = 467

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
 Frame = +2

Query: 29  ETGRAKAAQAVQHGARLKRKLQRRITRQALAEAKAIKEQINILVYV--AEMVATDPVLA- 199
           +T +AK A+ +   AR + K+ R   + A A AKA   Q+        A++ A   V+A 
Sbjct: 279 KTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAAQVKAKAKAKAAQVKAKAKVMAA 338

Query: 200 WTKAK------ELYSSLSQPEPENQARP 265
           W KAK         + +++ +P  + RP
Sbjct: 339 WAKAKAKAKAVRAKAKVARTQPRGRGRP 366


>BC110650-1|AAI10651.1| 1938|Homo sapiens ATG2 autophagy related 2
           homolog A (S. cerevisiae) protein.
          Length = 1938

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -3

Query: 323 ARISSRFPWSATRPTPRAWRGGLGSRVQVGLETSIAPWLLSKLALGPLPPFLQH 162
           A +  RFP +  RP    W G      Q+ LE S  P   S+L+ GP PP   H
Sbjct: 641 ATLRLRFPIADLRPERDPWAGQAVRAEQLRLELS-EPQFRSELSSGPGPPVPTH 693


>AB007864-1|BAA23700.1| 1956|Homo sapiens KIAA0404 protein.
          Length = 1956

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -3

Query: 323 ARISSRFPWSATRPTPRAWRGGLGSRVQVGLETSIAPWLLSKLALGPLPPFLQH 162
           A +  RFP +  RP    W G      Q+ LE S  P   S+L+ GP PP   H
Sbjct: 659 ATLRLRFPIADLRPERDPWAGQAVRAEQLRLELS-EPQFRSELSSGPGPPVPTH 711


>BC015116-1|AAH15116.1|  309|Homo sapiens uracil
           phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
           protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 224 SSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVNYTHTDLPRNVRQG 373
           +S S P PE Q RP           R +  K + L  Y H+ LP  +  G
Sbjct: 19  NSASTPSPE-QLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSG 67


>AL590234-2|CAI39682.1|  281|Homo sapiens uracil
           phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
           protein.
          Length = 281

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 224 SSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVNYTHTDLPRNVRQG 373
           +S S P PE Q RP           R +  K + L  Y H+ LP  +  G
Sbjct: 19  NSASTPSPE-QLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSG 67


>AL590234-1|CAI39681.1|  309|Homo sapiens uracil
           phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
           protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 224 SSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVNYTHTDLPRNVRQG 373
           +S S P PE Q RP           R +  K + L  Y H+ LP  +  G
Sbjct: 19  NSASTPSPE-QLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSG 67


>AL137013-2|CAI40089.1|  281|Homo sapiens uracil
           phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
           protein.
          Length = 281

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 224 SSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVNYTHTDLPRNVRQG 373
           +S S P PE Q RP           R +  K + L  Y H+ LP  +  G
Sbjct: 19  NSASTPSPE-QLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSG 67


>AL137013-1|CAI40088.1|  309|Homo sapiens uracil
           phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
           protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 224 SSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVNYTHTDLPRNVRQG 373
           +S S P PE Q RP           R +  K + L  Y H+ LP  +  G
Sbjct: 19  NSASTPSPE-QLRPGDLILDHAGGNRASRAKVILLTGYAHSSLPAELDSG 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,203,719
Number of Sequences: 237096
Number of extensions: 1791587
Number of successful extensions: 4656
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4653
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)