Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K02
         (571 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U88177-3|AAB42292.1|  191|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical ...    27   7.2  
U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    27   9.5  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    27   9.5  

>Z75542-6|CAA99864.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
 Frame = +3

Query: 240 LNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCLETYAKA*RLLPSTCLLQPTLF 419
           L   T PAP  + + +   P      + I++TT  RT   T        P+T     T+ 
Sbjct: 300 LPAETVPAPKTTTTTTTTVPS----TTTITTTTTQRTTPYTTTTTTTAAPTTT----TMK 351

Query: 420 SRRYPWKLLWSRSKAGRKNSKFYYSSYNPHPRPI-LNTSPFS 542
           + +YP + +    K  +KN + YY ++ P+ RP  LN +  S
Sbjct: 352 TIKYPIQEV----KKEKKNYESYYKNWKPYRRPFDLNPTQIS 389


>Z75538-3|CAA99842.3|  552|Caenorhabditis elegans Hypothetical
           protein F55D12.5 protein.
          Length = 552

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
 Frame = +3

Query: 240 LNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCLETYAKA*RLLPSTCLLQPTLF 419
           L   T PAP  + + +   P      + I++TT  RT   T        P+T     T+ 
Sbjct: 300 LPAETVPAPKTTTTTTTTVPS----TTTITTTTTQRTTPYTTTTTTTAAPTTT----TMK 351

Query: 420 SRRYPWKLLWSRSKAGRKNSKFYYSSYNPHPRPI-LNTSPFS 542
           + +YP + +    K  +KN + YY ++ P+ RP  LN +  S
Sbjct: 352 TIKYPIQEV----KKEKKNYESYYKNWKPYRRPFDLNPTQIS 389


>U88177-3|AAB42292.1|  191|Caenorhabditis elegans Hypothetical
           protein F53E10.6 protein.
          Length = 191

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +2

Query: 8   AVDGVEGETGRAKAAQAVQHGARLKRKLQRRITRQALAEAKAIKEQINILVYVAEMVATD 187
           +VDG  G+     A  A++   R K+K+ +++T++  +  K++KE    L  V   + TD
Sbjct: 37  SVDGGAGDADETVAFPAIE---RRKKKVIKKLTKKEQSLKKSVKEYRIKLALVKPDITTD 93


>Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical
           protein T07D10.3 protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 501 CNCCNRIWS 475
           CNCCNR WS
Sbjct: 159 CNCCNRTWS 167


>AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical
           protein H16D19.3 protein.
          Length = 244

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 501 CNCCNRIWS 475
           CNCCNR WS
Sbjct: 147 CNCCNRTWS 155


>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 542 GKWRGVQDRSWMWIVTAVI 486
           G WR  +   W+WI+TAV+
Sbjct: 436 GLWRCSKHDFWIWIITAVV 454


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 542 GKWRGVQDRSWMWIVTAVI 486
           G WR  +   W+WI+TAV+
Sbjct: 436 GLWRCSKHDFWIWIITAVV 454


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +1

Query: 169 RNGGNGPSASLDKSQGAILVSKPT*TREPSPPRHARGVGRVADQGNREEIRASRQL 336
           R GG GP    +  +G +L       RE    R   G GR   + +R+  R   Q+
Sbjct: 804 RRGGGGPPFRPENGRGRLLDQSEMWNREQREMRGGGGAGRDGGREHRDYDRDRSQI 859


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,489,512
Number of Sequences: 27780
Number of extensions: 262370
Number of successful extensions: 770
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)