BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J24 (578 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_06_0300 - 22126177-22126434,22126892-22127274,22128596-22129064 29 2.0 01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739... 29 3.5 09_02_0530 + 10285844-10287217 28 4.7 06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 28 6.2 03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 28 6.2 10_08_0355 - 17131178-17131268,17131376-17131429,17131521-171316... 27 8.2 >09_06_0300 - 22126177-22126434,22126892-22127274,22128596-22129064 Length = 369 Score = 29.5 bits (63), Expect = 2.0 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = -3 Query: 192 FRQRKLISTMKRQFSCHTIRICLSVGTVRKSFQKCPRTVLLRSSLRCVDCS 40 +RQ +++ +K Q SC + SVG V ++ + +L S + +DCS Sbjct: 141 WRQHGVVTPVKDQGSCGSCWAFSSVGAVESAYAIATKKLLRLSEQQVLDCS 191 >01_05_0655 - 23972488-23973152,23973193-23973241,23973883-23973940, 23974184-23974215,23975961-23976040,23976509-23977898 Length = 757 Score = 28.7 bits (61), Expect = 3.5 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2 Query: 35 GQLQSTQRKELRSNTVLGHF*KDFRTVPTERQIRIVWQENCLFIVEINFLCRKLLARER 211 G+L + Q LRSN +LG D +P Q+R+++ +N L I KL A ER Sbjct: 94 GRLTNLQVLSLRSNRILGGIPDDVLQLP---QLRLLFLQNNLLSGAIPPAVSKLAALER 149 >09_02_0530 + 10285844-10287217 Length = 457 Score = 28.3 bits (60), Expect = 4.7 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +1 Query: 160 FHRGNQFSLSETIGKRTPICMKKKLQRIINDLMK 261 FH G QF + + R P C +K+ + DL K Sbjct: 374 FHGGLQFQIEHHLFPRLPRCHLRKVSPFVRDLCK 407 >06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155, 3325237-3325317,3328173-3328820 Length = 819 Score = 27.9 bits (59), Expect = 6.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -3 Query: 81 TVLLRSSLRCVDCSCPAFERMG 16 TVLL +S + C C FERMG Sbjct: 388 TVLLDTSTMEISCGCRKFERMG 409 >03_06_0337 + 33224333-33224479,33224603-33224663,33224740-33224776, 33225237-33225367,33225447-33225590,33225686-33225776, 33225973-33226106,33226234-33226373,33227328-33227426, 33227520-33227602,33227690-33227744,33227826-33227937, 33228274-33228766,33228881-33229094,33229203-33229273, 33229733-33229901,33229991-33230120,33230556-33230968, 33231059-33231262 Length = 975 Score = 27.9 bits (59), Expect = 6.2 Identities = 15/63 (23%), Positives = 28/63 (44%) Frame = +2 Query: 371 SAIYRIVGYINAFKHYLKPYPQEKLHFVGVEINDVVVEKLVTFFDYSQFDATNSVFLTKK 550 S ++R+ G I P P+E++ G+E + + F + + V L +K Sbjct: 221 SEVFRLAGEIGTVVSVSYPLPKEEMELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRK 280 Query: 551 EIK 559 E+K Sbjct: 281 EVK 283 >10_08_0355 - 17131178-17131268,17131376-17131429,17131521-17131663, 17131812-17132096,17132168-17132301,17132383-17132556, 17132639-17132707,17132814-17132878,17133441-17133589, 17133747-17133989,17134119-17134255,17134340-17134561, 17134661-17134827,17136680-17136819 Length = 690 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = +3 Query: 39 NYNLHSV---KNYEAIRFLDIFEKTFVQSLQK 125 NYN+ V KN+ A+R DIF KT + +K Sbjct: 521 NYNIAIVSLKKNFNAVRLEDIFSKTVQEPSEK 552 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,745,064 Number of Sequences: 37544 Number of extensions: 296050 Number of successful extensions: 766 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 766 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1352600424 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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