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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J24
         (578 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.68 
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.7  
SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11)          28   6.3  
SB_59320| Best HMM Match : Exo_endo_phos (HMM E-Value=0.29)            27   8.4  
SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)         27   8.4  
SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.4  
SB_1162| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3e-08)          27   8.4  
SB_51484| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036)          27   8.4  
SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0)                       27   8.4  
SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11)         27   8.4  
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)                       27   8.4  
SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)                27   8.4  
SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.4  

>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1548

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 268  LAMCSVQHLNHSTSTPSCPVRLTFTKPHFET 360
            L+ CS+Q L  +T T   P+R++F++PH  T
Sbjct: 1421 LSTCSLQSLTDNT-TSERPIRISFSEPHLHT 1450


>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1384

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +3

Query: 144  GKKIAFSSWKSIFFVGNYWQENADLYEEEVTKDYQRSYEIVARHVLGA 287
            G +IA    K  F +G        L   +VTKD   SYE VA +V GA
Sbjct: 1111 GLRIASGQGKGQFLLGKDNSGRDILIIAQVTKDVSGSYECVASNVGGA 1158


>SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11)
          Length = 129

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 381 TGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SHS-LTIANLMPLTV 533
           T + +TLTHS++T   +   N   S L    L+  N +HS LT + L  LT+
Sbjct: 6   TLIHLTLTHSNLTHLTLTHSNLTHSTLTHSNLTHLNLTHSTLTYSTLTHLTL 57


>SB_59320| Best HMM Match : Exo_endo_phos (HMM E-Value=0.29)
          Length = 243

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 28  SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 78


>SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 337

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 31  SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 81


>SB_22121| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 231 LLLHTDRRSLANSFRQRKLISTMKRQ 154
           L L+  +R +AN +R+ K+ ST+KR+
Sbjct: 7   LKLNIGKRPIANKYREGKMKSTLKRE 32


>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
          Length = 851

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 447 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 497


>SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 917

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 96  SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 146


>SB_1162| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3e-08)
          Length = 285

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 175 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 225


>SB_51484| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036)
          Length = 283

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 68  SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 118


>SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 940

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 96  SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 146


>SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11)
          Length = 509

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 388 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 438


>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 1821

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 581 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 631



 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353  SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
            SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 1042 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 1092


>SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)
          Length = 759

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 146 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 196


>SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1457

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +2

Query: 353 SRPCILSAIYR---IVGYINAFKHYLKPYPQE-KLHFVGVEINDVVVEKLV 493
           SRP I+S +YR    + Y N F+  +K    E K H +  ++N  +++K V
Sbjct: 293 SRPFIVSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKV 343


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,751,509
Number of Sequences: 59808
Number of extensions: 367549
Number of successful extensions: 995
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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