Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J24
         (578 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056994-1|BAB71337.1|  500|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.              31   3.9  
BC113967-1|AAI13968.1|  245|Homo sapiens C9orf125 protein protein.     30   5.1  
BC033550-1|AAH33550.1|  403|Homo sapiens C9orf125 protein protein.     30   5.1  
BC006115-1|AAH06115.1|  403|Homo sapiens chromosome 9 open readi...    30   5.1  
AL353621-7|CAI14616.1|  403|Homo sapiens chromosome 9 open readi...    30   5.1  

>AK056994-1|BAB71337.1|  500|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32432 fis, clone SKMUS2001157, highly similar to
           Homo sapiens nebulin (NEB) gene. ).
          Length = 500

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 16/68 (23%), Positives = 38/68 (55%)
 Frame = +1

Query: 190 ETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 369
           E +GK TP+ +  +++R+ ++   +S  +   +++  +T+TP  P  +   K + E + S
Sbjct: 111 ENMGKGTPLAVTPEMERVKHNQENISSVLYK-ENVGKATATPVTP-EMQRVKRNQENISS 168

Query: 370 ISYIQDCG 393
           + Y ++ G
Sbjct: 169 VLYKENLG 176


>AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.
          Length = 2802

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 16/68 (23%), Positives = 38/68 (55%)
 Frame = +1

Query: 190  ETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 369
            E +GK TP+ +  +++R+ ++   +S  +   +++  +T+TP  P  +   K + E + S
Sbjct: 2413 ENMGKGTPLAVTPEMERVKHNQENISSVLYK-ENVGKATATPVTP-EMQRVKRNQENISS 2470

Query: 370  ISYIQDCG 393
            + Y ++ G
Sbjct: 2471 VLYKENLG 2478


>BC113967-1|AAI13968.1|  245|Homo sapiens C9orf125 protein protein.
          Length = 245

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 335 LLPNRTSRPCILSAIYRIVGYINAFKHYLKPYPQEKLHFVGV 460
           LL  R S P +  A+Y  + +    +HY+ P P   L +VGV
Sbjct: 69  LLRARFSEPHLRDALYLKLYHPERLQHYINPEPMRILEWVGV 110


>BC033550-1|AAH33550.1|  403|Homo sapiens C9orf125 protein protein.
          Length = 403

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 335 LLPNRTSRPCILSAIYRIVGYINAFKHYLKPYPQEKLHFVGV 460
           LL  R S P +  A+Y  + +    +HY+ P P   L +VGV
Sbjct: 227 LLRARFSEPHLRDALYLKLYHPERLQHYINPEPMRILEWVGV 268


>BC006115-1|AAH06115.1|  403|Homo sapiens chromosome 9 open reading
           frame 125 protein.
          Length = 403

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 335 LLPNRTSRPCILSAIYRIVGYINAFKHYLKPYPQEKLHFVGV 460
           LL  R S P +  A+Y  + +    +HY+ P P   L +VGV
Sbjct: 227 LLRARFSEPHLRDALYLKLYHPERLQHYINPEPMRILEWVGV 268


>AL353621-7|CAI14616.1|  403|Homo sapiens chromosome 9 open reading
           frame 125 protein.
          Length = 403

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 335 LLPNRTSRPCILSAIYRIVGYINAFKHYLKPYPQEKLHFVGV 460
           LL  R S P +  A+Y  + +    +HY+ P P   L +VGV
Sbjct: 227 LLRARFSEPHLRDALYLKLYHPERLQHYINPEPMRILEWVGV 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,410,537
Number of Sequences: 237096
Number of extensions: 1692572
Number of successful extensions: 7596
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7596
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)