Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J24
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-23|AAP31422.1|  187|Caenorhabditis elegans Hypothetical...    30   1.4  
AC084158-22|AAM15623.1|  214|Caenorhabditis elegans Hypothetical...    30   1.4  
AC084158-21|AAK68581.1|  271|Caenorhabditis elegans Hypothetical...    30   1.4  
Z77652-4|CAB01117.2|  303|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81085-3|CAB03115.1|  769|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical ...    27   9.6  

>AC084158-23|AAP31422.1|  187|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.7c protein.
          Length = 187

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 220 MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 369
           ++K  QR+ +D+ +  L +C  +H+NH+  TP  P + T     FET  S
Sbjct: 104 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTK-TEIPEIFETKFS 150


>AC084158-22|AAM15623.1|  214|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.7b protein.
          Length = 214

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 220 MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 369
           ++K  QR+ +D+ +  L +C  +H+NH+  TP  P + T     FET  S
Sbjct: 131 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTK-TEIPEIFETKFS 177


>AC084158-21|AAK68581.1|  271|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.7a protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 220 MKKKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHS 369
           ++K  QR+ +D+ +  L +C  +H+NH+  TP  P + T     FET  S
Sbjct: 177 LQKMRQRVADDIGEKVLDIC--EHINHNHYTPKMPTK-TEIPEIFETKFS 223


>Z77652-4|CAB01117.2|  303|Caenorhabditis elegans Hypothetical
           protein C06B3.7 protein.
          Length = 303

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
 Frame = +3

Query: 42  YNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIAFSS--WKSIFFVGNYWQE--N 209
           Y+++  +N+E  +   +     +Q L KG+   + ++++ S+  W++IF    YW E   
Sbjct: 77  YSMNKRRNWEIDKSDRVELMGQIQELHKGEDVMFLERVSMSTWEWQTIFRYEFYWNELKI 136

Query: 210 ADLYEEEVTKDYQRSYEIVA 269
             ++E +   D +  Y+I +
Sbjct: 137 CTMHELDTYADVKPEYKITS 156


>U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical
           protein C01B10.3 protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 45  NLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIAFSSWKSIFFVGNYWQENADLYE 224
           NL+  KN+  I++ D F  T   +++ G   S G        ++ F  G  +    D Y 
Sbjct: 93  NLYLFKNHSDIQYYDRFSSTGYINVRSGHQHSIGSNECDGFIQNTF--GQNYTFRRDFYN 150

Query: 225 EEVTKDY--QRSYEIVAR 272
           ++ T+D   QR+  ++AR
Sbjct: 151 DDGTRDLANQRTGFLLAR 168


>Z81085-3|CAB03115.1|  769|Caenorhabditis elegans Hypothetical
           protein F46F3.4 protein.
          Length = 769

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 226 KKLQRIINDLMKLSLAMCSVQHLNHSTSTPSCPVRLTFTKPHFE 357
           K+ Q+  ++L K++       H + STS+   P  +TF+ P FE
Sbjct: 325 KENQQKYSELSKMASTDPHSNHSSPSTSSQKAPTLITFSPPSFE 368


>AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical
           protein W10D9.3 protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
 Frame = +3

Query: 66  YEAIRFLDIFEKTFVQSLQK-GKFE---SYGKKIAFSSWKSIFFVGNY--------WQEN 209
           +E +  LD     FV+  +K  KF+   S  KK   + W    FV  Y        ++  
Sbjct: 118 FENLNLLDNSMDFFVEIQRKMKKFDKSVSLEKKYMENDWNCFDFVMEYMKFTNYRNYRSK 177

Query: 210 ADLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFMPSALDFYQ 344
            D  EE VTK  +      ++  L +AP+    H F     DF +
Sbjct: 178 IDFLEEFVTKKLENVNFKFSQQNLNSAPQMNPDHRFFKIMADFLE 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,341,413
Number of Sequences: 27780
Number of extensions: 284763
Number of successful extensions: 836
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)