BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J23
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 45 4e-05
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 45 4e-05
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 43 2e-04
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 43 2e-04
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 40 0.001
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 40 0.001
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 39 0.002
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 39 0.002
Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical ... 29 1.9
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 1.9
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.9
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = -1
Query: 444 VKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVDEE 271
V +++PKF+I+ +LDLK G+ +IF E A D V +S +A I+VDE+
Sbjct: 254 VSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIADKVFISSGIHKAIIEVDED 311
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 209 LAHPLVFKVDHPFAYFILYEDKIIF 135
+A P F DHPF + +L+E+ +F
Sbjct: 330 MAEPTQFVADHPFLFAVLFENHTLF 354
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = -1
Query: 444 VKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVDEE 271
V +++PKF+I+ +LDLK G+ +IF E A D V +S +A I+VDE+
Sbjct: 254 VSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIADKVFISSGIHKAIIEVDED 311
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 209 LAHPLVFKVDHPFAYFILYEDKIIF 135
+A P F DHPF + +L+E+ +F
Sbjct: 330 MAEPTQFVADHPFLFAVLFENHTLF 354
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = -1
Query: 456 TNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVD 277
++ V +++PK++I++KL L+ G+ K F+ A D + VS+ +A I+VD
Sbjct: 255 SSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVD 314
Query: 276 EEXXXXXXXXXXXXVPYSSHSRPRPPFGFQS 184
EE V S+ P FQ+
Sbjct: 315 EEGTTAAAATVVSFVRKSARPSAIKPIVFQA 345
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 215 PDLAHPLVFKVDHPFAYFILYEDKIIF 135
P P+VF+ DHPF + + + IF
Sbjct: 335 PSAIKPIVFQADHPFLFMLTQTNHPIF 361
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = -1
Query: 456 TNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVD 277
++ V +++PK++I++KL L+ G+ K F+ A D + VS+ +A I+VD
Sbjct: 255 SSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVD 314
Query: 276 EEXXXXXXXXXXXXVPYSSHSRPRPPFGFQS 184
EE V S+ P FQ+
Sbjct: 315 EEGTTAAAATVVSFVRKSARPSAIKPIVFQA 345
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 215 PDLAHPLVFKVDHPFAYFILYEDKIIF 135
P P+VF+ DHPF + + + IF
Sbjct: 335 PSAIKPIVFQADHPFLFMLTQTNHPIF 361
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = -1
Query: 504 KQGEKGLLEDVFR-LRPTNRK--VKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIV 334
K+ K L E F L T ++ + ++PKF I+ L+LK G++ IF++ A
Sbjct: 233 KEALKKLNEKRFNDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSG 292
Query: 333 KGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPYSSHSRPRPPFGF 190
+++ +SE +A I+V+EE VP S +R P F
Sbjct: 293 LAENLKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMS--ARMEQPVNF 338
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = -1
Query: 504 KQGEKGLLEDVFR-LRPTNRK--VKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIV 334
K+ K L E F L T ++ + ++PKF I+ L+LK G++ IF++ A
Sbjct: 233 KEALKKLNEKRFNDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSG 292
Query: 333 KGDSVVVSEAFQEAFIKVDEEXXXXXXXXXXXXVPYSSHSRPRPPFGF 190
+++ +SE +A I+V+EE VP S +R P F
Sbjct: 293 LAENLKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMS--ARMEQPVNF 338
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 438 LEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVDE 274
L PKF++ K++LK KFG++++F E A G + ++ A +A I+VD+
Sbjct: 263 LTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPGLQLASATHQALIEVDQ 317
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 438 LEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVDE 274
L PKF++ K++LK KFG++++F E A G + ++ A +A I+VD+
Sbjct: 263 LTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPGLQLASATHQALIEVDQ 317
>Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical
protein C08F11.3 protein.
Length = 232
Score = 30.7 bits (66), Expect = 0.84
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 6 VFFFFFYCKQTFISIINKKNVYDCFKINDSVSKVLY 113
+F+ F + T+I +I K++V+ FK +V+ ++Y
Sbjct: 175 IFYLVFILRFTYIHVITKRDVFGTFKKTKNVNLLMY 210
>Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical
protein R03A10.3 protein.
Length = 709
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -1
Query: 498 GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPK---FGVSKIFNEP 349
G+K LE V RL+ V L+ F S LDL RP F KIF P
Sbjct: 161 GKKYSLESVHRLQEKGWAVCLDAASFVSSSALDLSQQRPNFIAFSFYKIFGYP 213
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = -1
Query: 510 WTKQGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVK 331
WTK +K L +D + P N V L + K++ + + K F++ N+ +
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLLNVEKYD----EGVYKCVASNSIGKAFDDTQLNVYE 4838
Query: 330 GDSVVVSEAFQEAFIKVDE 274
GD + ++ F+ + I +D+
Sbjct: 4839 GDFLPLT-GFEGSGINIDD 4856
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = -1
Query: 510 WTKQGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVK 331
WTK +K L +D + P N V L + K++ + + K F++ N+ +
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLLNVEKYD----EGVYKCVASNSIGKAFDDTQLNVYE 4838
Query: 330 GDSVVVSEAFQEAFIKVDE 274
GD + ++ F+ + I +D+
Sbjct: 4839 GDFLPLT-GFEGSGINIDD 4856
>AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical
protein Y80D3A.4 protein.
Length = 424
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 12 FFFFYCKQTFISIINKKNVYDCFKINDSVSKVLY 113
FF +CK T I I ++N+ DC + ++L+
Sbjct: 131 FFVVHCKPTLIEIHTQQNLIDCHDFVEKGRRILF 164
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = -1
Query: 510 WTKQGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVK 331
WTK +K L +D + P N V L + K++ + + K F++ N+ +
Sbjct: 4783 WTKNDQKMLDDDAIYVLPNNSLVLLNVEKYD----EGVYKCVASNSIGKAFDDTQLNVYE 4838
Query: 330 GDSVVVSEAFQEAFIKVDE 274
GD + ++ F+ + I +D+
Sbjct: 4839 GDFLPLT-GFEGSGINIDD 4856
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -1
Query: 450 RKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNEPAPNIVKGDSVVVSEAFQEAFIKVDE 274
RK+ E K DLK L+P G+SK F + +V V SE E F++ E
Sbjct: 575 RKIAEEYKKDNSSGMTDLKKLKPLQGLSKPFGDAVGALVSITKVSRSEL--ETFVRNGE 631
>Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical
protein C27A7.7 protein.
Length = 336
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 460 PKSKHVFKETFLPLLCPTPTIYPSSLV 540
P+ + +F + FLP L + T+YP S V
Sbjct: 303 PEYRKLFTKIFLPFLYNSSTVYPESTV 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,566,247
Number of Sequences: 27780
Number of extensions: 314137
Number of successful extensions: 857
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -