Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J23
(606 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 2.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 4.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 7.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 7.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 7.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.4
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 9.4
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.4
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 100 LTESLILKQSYTFFLLMME 44
LT+SLI Q++ FFL E
Sbjct: 289 LTDSLIAAQAFVFFLAGFE 307
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -1
Query: 606 LKHSLSNLPYKEFWFS*VVPTSDQTGRVYRRCWTKQG 496
L H+L P KEFW + SD + W G
Sbjct: 175 LSHALLKDPVKEFWERRTLQISDGIENIGSIRWELAG 211
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -1
Query: 606 LKHSLSNLPYKEFWFS*VVPTSDQTGRVYRRCWTKQG 496
L H+L P KEFW + SD + W G
Sbjct: 228 LSHALLKDPVKEFWERRTLQISDGIENIGSIRWELAG 264
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 212 DLAHPLVFKVDHPFAYFILYED 147
DLA+ LV+ DH I+Y++
Sbjct: 195 DLANTLVYMADHKGDALIVYQN 216
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 280 YFDKCLLEGFRHYYTVTL 333
Y ++CLLE R Y V L
Sbjct: 399 YLERCLLETLRMYPPVPL 416
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.4
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 290 NASWKASDTTTLSPLTMFGAGSLNIFETPNLGLKGLRSN-LLFISNFGISNFT 445
N+ W AS L+P + G L+ E ++ L N L + N N T
Sbjct: 127 NSVWGASRFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLT 179
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 262 CGSFFIYFDKCLL 300
C SF Y+D C+L
Sbjct: 84 CSSFRFYWDLCML 96
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 262 CGSFFIYFDKCLL 300
C SF Y+D C+L
Sbjct: 84 CSSFRFYWDLCML 96
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 262 CGSFFIYFDKCLL 300
C SF Y+D C+L
Sbjct: 84 CSSFRFYWDLCML 96
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 250 ESAGCGSFFIYFDKC 294
ES + YFDKC
Sbjct: 454 ESVNIDKLYTYFDKC 468
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 250 ESAGCGSFFIYFDKC 294
ES + YFDKC
Sbjct: 454 ESVNIDKLYTYFDKC 468
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 218 IPDLAHPLVFKVDHPFAYFILYEDKI 141
+PDL+ P+ PF+ FI KI
Sbjct: 67 LPDLSIPMQLGRRQPFSLFIPAHRKI 92
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 499 LLCPTPTIYPSSLVG 543
L C T T+Y S+VG
Sbjct: 157 LACSTATVYVMSVVG 171
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,382
Number of Sequences: 438
Number of extensions: 3723
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -