BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J23 (606 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g31170.2 68417.m04425 protein kinase family protein contains ... 30 1.0 At4g31170.1 68417.m04424 protein kinase family protein contains ... 30 1.0 At1g02205.2 68414.m00154 CER1 protein identical to maize gl1 hom... 30 1.0 At1g02205.1 68414.m00153 CER1 protein identical to maize gl1 hom... 30 1.0 At1g63450.1 68414.m07175 exostosin family protein contains Pfam ... 29 2.4 At2g24360.1 68415.m02911 serine/threonine/tyrosine kinase, putat... 29 3.2 At3g43320.1 68416.m04579 hypothetical protein 28 5.5 At1g42740.1 68414.m04939 hypothetical protein 28 5.5 At3g19490.1 68416.m02470 sodium hydrogen antiporter, putative si... 27 9.6 At3g16540.1 68416.m02112 DegP protease, putative contains simila... 27 9.6 >At4g31170.2 68417.m04425 protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719 Length = 412 Score = 30.3 bits (65), Expect = 1.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 416 ISNFGISNFTFLLVGLSLNTSSRRPFSPCFVQHRRYTRPV 535 I++FG++ G++ T + R +P +QHR YT+ V Sbjct: 273 IADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKV 312 >At4g31170.1 68417.m04424 protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719 Length = 412 Score = 30.3 bits (65), Expect = 1.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 416 ISNFGISNFTFLLVGLSLNTSSRRPFSPCFVQHRRYTRPV 535 I++FG++ G++ T + R +P +QHR YT+ V Sbjct: 273 IADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKV 312 >At1g02205.2 68414.m00154 CER1 protein identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from [Arabidopsis thaliana] Length = 625 Score = 30.3 bits (65), Expect = 1.0 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 233 YHIHRIPDLAHPLVFKVDHPFAYFILYEDKIIFGWYLYPLI*DFTDRIINFK-TIIYIFF 57 YH H + + V HPFA I Y I+F L + T II+F IIYI F Sbjct: 158 YHSHHHSSIVTEPITSVIHPFAEHIAY--FILFAIPLLTTLLTKTASIISFAGYIIYIDF 215 Query: 56 IND 48 +N+ Sbjct: 216 MNN 218 >At1g02205.1 68414.m00153 CER1 protein identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from [Arabidopsis thaliana] Length = 580 Score = 30.3 bits (65), Expect = 1.0 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 233 YHIHRIPDLAHPLVFKVDHPFAYFILYEDKIIFGWYLYPLI*DFTDRIINFK-TIIYIFF 57 YH H + + V HPFA I Y I+F L + T II+F IIYI F Sbjct: 158 YHSHHHSSIVTEPITSVIHPFAEHIAY--FILFAIPLLTTLLTKTASIISFAGYIIYIDF 215 Query: 56 IND 48 +N+ Sbjct: 216 MNN 218 >At1g63450.1 68414.m07175 exostosin family protein contains Pfam profile: PF03016 exostosin family Length = 641 Score = 29.1 bits (62), Expect = 2.4 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -1 Query: 486 LLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPKFGV-SKIFNEPAPNIVKGDSVVVS 310 L ED R K +++ + + KL K LR + + S I +E P +V GDS Sbjct: 560 LPEDHRRYSVYINKEDVKLKRVNVIEKLMSKTLREREDMRSYIVHELLPGLVYGDSNAKF 619 Query: 309 EAFQEAF 289 E F++AF Sbjct: 620 ERFRDAF 626 >At2g24360.1 68415.m02911 serine/threonine/tyrosine kinase, putative similar to serine/threonine/tyrosine kinase [Arachis hypogaea] gi|13124865|gb|AAK11734 Length = 411 Score = 28.7 bits (61), Expect = 3.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +2 Query: 416 ISNFGISNFTFLLVGLSLNTSSRRPFSPCFVQHRRYTRPV 535 I++FG++ G++ T + R +P +QHR Y + V Sbjct: 272 IADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRAYNQKV 311 >At3g43320.1 68416.m04579 hypothetical protein Length = 510 Score = 27.9 bits (59), Expect = 5.5 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -1 Query: 534 TGRVYRRCWTKQGEK-GLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIF 358 T V ++ W + +K + F + + + K+ +PK + L KPL F V I Sbjct: 78 TSHVTKKSWLQAAQKRSFTKQKFEVVEVDGQEKVVVPK---EVFLGAKPLWEDFLVGNIL 134 Query: 357 NEPAPNIVKGDSVV 316 N AP++ K +V Sbjct: 135 NSKAPHVGKIHMIV 148 >At1g42740.1 68414.m04939 hypothetical protein Length = 359 Score = 27.9 bits (59), Expect = 5.5 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -1 Query: 486 LLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLRPKFGVSKIFNE-PAPNIVKGDSVV 316 +L++ + K K+ PK KSK +L R K + K+ E P ++VK S+V Sbjct: 133 ILQNPISVAENVTKPKVSFPKSPRKSKQELDDARCKAMMDKLIVEMPLIDVVKSSSIV 190 >At3g19490.1 68416.m02470 sodium hydrogen antiporter, putative similar to NhaD [Vibrio parahaemolyticus] gi|3123728|dbj|BAA25994; Na+/H+ aniporter (NhaD) family member, PMID:11500563 Length = 576 Score = 27.1 bits (57), Expect = 9.6 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +1 Query: 73 IVLKLMILSVKSYINGYKYQPKIILSSYKM 162 + + L ++S+ S +NG + PK +L+S KM Sbjct: 327 LAVPLALMSLTSEVNGKEQDPKDVLASEKM 356 >At3g16540.1 68416.m02112 DegP protease, putative contains similarity to DegP2 protease GI:13172275 from [Arabidopsis thaliana] Length = 555 Score = 27.1 bits (57), Expect = 9.6 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = -1 Query: 420 EIKSKLDLKPLRPKFGVSKIFNEPAPNIVKG 328 E + + LKP++P F V + +N P+ I G Sbjct: 396 EYEYNISLKPVKPNFTVQQFYNVPSYYIFGG 426 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,606,175 Number of Sequences: 28952 Number of extensions: 290265 Number of successful extensions: 818 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 795 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 817 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1206913392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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