Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J21
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 180 1e-46
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 178 5e-46
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 177 8e-46
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 1.7
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 2.2
SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2 |Schizosacc... 27 2.2
SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo... 26 3.8
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 8.8
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 25 8.8
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 180 bits (439), Expect = 1e-46
Identities = 88/179 (49%), Positives = 119/179 (66%)
Frame = +1
Query: 82 SKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKER 261
SK+ PES+ ++++A KKR+ I KRAE +YR ER
Sbjct: 10 SKEQIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESY-DAEYRKAER 68
Query: 262 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLN 441
++I L R+AR GNYYVP E KL FVIRIRG+N + PK RK++QL RL QINNGVFV+ N
Sbjct: 69 EQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFN 128
Query: 442 KATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
KAT ML++ EPY+ +G PNLK+VREL+YKRGF K+N +R+ ++ N++IE L K +I+
Sbjct: 129 KATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSIL 187
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 178 bits (434), Expect = 5e-46
Identities = 84/172 (48%), Positives = 116/172 (67%)
Frame = +1
Query: 103 PESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLAR 282
PES+ +++SA KKR+ I KRAE +YR ER++I LAR
Sbjct: 16 PESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAY-EAEYRAAEREQIELAR 74
Query: 283 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 462
+AR GNY+VP E KL FV+RIRG+N + PK RK++QL RL QINNG+FV+ NKA ML
Sbjct: 75 KARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEML 134
Query: 463 RIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
++ EPY+ +G PN K+VREL+YKRGF K+N +R+P++ N++IE L K +I+
Sbjct: 135 QVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSIL 186
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 177 bits (432), Expect = 8e-46
Identities = 84/150 (56%), Positives = 111/150 (74%)
Frame = +1
Query: 169 LKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRI 348
+ ++ A K RKE FKRAE + +YR +ER+ IRL R A+N+G+ +VP E KL FVIRI
Sbjct: 37 IAKKEAQKKNRKETFKRAETFIN-NYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRI 95
Query: 349 RGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVY 528
GV + PK+RKVL+L RL +INN VFVR NKA MLRI EPY+ +G PNL SVREL+Y
Sbjct: 96 AGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIY 155
Query: 529 KRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
KRGF K+NG+R+ ++ N+LIE+ L K ++I
Sbjct: 156 KRGFGKINGQRIALSDNALIEEALGKYDVI 185
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 286 ARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 405
+ N+G YY G +AFV I GV + SP++ LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 496 PNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
P LK+ REL+ K+ + V SN ++EK L +II
Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463
>SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.1 bits (57), Expect = 2.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 196 KRKEIFKRAEPICSKDYRIKERDEIRLARQ 285
K K+ K+AE C +YRIKE D +++ +Q
Sbjct: 251 KLKKALKQAEYYCYMNYRIKE-DRLKVLQQ 279
>SPAC3A12.17c |cys12|cys1b|cysteine synthase
Cys12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/69 (21%), Positives = 28/69 (40%)
Frame = +1
Query: 190 IKKRKEIFKRAEPICSKDYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVS 369
I + F AEP+ YR+ + + ++R +V + + V +R ++
Sbjct: 292 INRMTRNFSIAEPLIDMAYRVTDEQAVAMSRYLVTHDGLFVGSSSAVNCVAAVRLAKKLG 351
Query: 370 PKVRKVLQL 396
P R V L
Sbjct: 352 PGHRIVTLL 360
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.0 bits (52), Expect = 8.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 241 DYRIKERDEIRLARQARNRGNYYVPGE 321
D+ + +RL N+ N+++PGE
Sbjct: 316 DFLVDWAKSVRLCANRFNKSNFFIPGE 342
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 182 PLPLRRGKKSLREPNQYVQRITASRSVMK 268
PLP R K S+R + +++TAS MK
Sbjct: 418 PLPERLQKDSMRRSSPLNEKVTASSERMK 446
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,447,645
Number of Sequences: 5004
Number of extensions: 47702
Number of successful extensions: 116
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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