BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J21 (621 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 180 1e-46 SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 178 5e-46 SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 177 8e-46 SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 1.7 SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 2.2 SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2 |Schizosacc... 27 2.2 SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo... 26 3.8 SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 8.8 SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 25 8.8 >SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces pombe|chr 2|||Manual Length = 251 Score = 180 bits (439), Expect = 1e-46 Identities = 88/179 (49%), Positives = 119/179 (66%) Frame = +1 Query: 82 SKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKER 261 SK+ PES+ ++++A KKR+ I KRAE +YR ER Sbjct: 10 SKEQIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESY-DAEYRKAER 68 Query: 262 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLN 441 ++I L R+AR GNYYVP E KL FVIRIRG+N + PK RK++QL RL QINNGVFV+ N Sbjct: 69 EQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFN 128 Query: 442 KATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 KAT ML++ EPY+ +G PNLK+VREL+YKRGF K+N +R+ ++ N++IE L K +I+ Sbjct: 129 KATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSIL 187 >SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|Schizosaccharomyces pombe|chr 1|||Manual Length = 250 Score = 178 bits (434), Expect = 5e-46 Identities = 84/172 (48%), Positives = 116/172 (67%) Frame = +1 Query: 103 PESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLAR 282 PES+ +++SA KKR+ I KRAE +YR ER++I LAR Sbjct: 16 PESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAY-EAEYRAAEREQIELAR 74 Query: 283 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 462 +AR GNY+VP E KL FV+RIRG+N + PK RK++QL RL QINNG+FV+ NKA ML Sbjct: 75 KARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEML 134 Query: 463 RIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 ++ EPY+ +G PN K+VREL+YKRGF K+N +R+P++ N++IE L K +I+ Sbjct: 135 QVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSIL 186 >SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharomyces pombe|chr 1|||Manual Length = 249 Score = 177 bits (432), Expect = 8e-46 Identities = 84/150 (56%), Positives = 111/150 (74%) Frame = +1 Query: 169 LKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRI 348 + ++ A K RKE FKRAE + +YR +ER+ IRL R A+N+G+ +VP E KL FVIRI Sbjct: 37 IAKKEAQKKNRKETFKRAETFIN-NYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRI 95 Query: 349 RGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVY 528 GV + PK+RKVL+L RL +INN VFVR NKA MLRI EPY+ +G PNL SVREL+Y Sbjct: 96 AGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIY 155 Query: 529 KRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 KRGF K+NG+R+ ++ N+LIE+ L K ++I Sbjct: 156 KRGFGKINGQRIALSDNALIEEALGKYDVI 185 >SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium transporting Cta4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1211 Score = 27.5 bits (58), Expect = 1.7 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = +1 Query: 286 ARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 405 + N+G YY G +AFV I GV + SP++ LQL ++ Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169 >SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe|chr 1|||Manual Length = 560 Score = 27.1 bits (57), Expect = 2.2 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 496 PNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 P LK+ REL+ K+ + V SN ++EK L +II Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463 >SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 451 Score = 27.1 bits (57), Expect = 2.2 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +1 Query: 196 KRKEIFKRAEPICSKDYRIKERDEIRLARQ 285 K K+ K+AE C +YRIKE D +++ +Q Sbjct: 251 KLKKALKQAEYYCYMNYRIKE-DRLKVLQQ 279 >SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharomyces pombe|chr 1|||Manual Length = 395 Score = 26.2 bits (55), Expect = 3.8 Identities = 15/69 (21%), Positives = 28/69 (40%) Frame = +1 Query: 190 IKKRKEIFKRAEPICSKDYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVS 369 I + F AEP+ YR+ + + ++R +V + + V +R ++ Sbjct: 292 INRMTRNFSIAEPLIDMAYRVTDEQAVAMSRYLVTHDGLFVGSSSAVNCVAAVRLAKKLG 351 Query: 370 PKVRKVLQL 396 P R V L Sbjct: 352 PGHRIVTLL 360 >SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|Schizosaccharomyces pombe|chr 1|||Manual Length = 2397 Score = 25.0 bits (52), Expect = 8.8 Identities = 8/27 (29%), Positives = 15/27 (55%) Frame = +1 Query: 241 DYRIKERDEIRLARQARNRGNYYVPGE 321 D+ + +RL N+ N+++PGE Sbjct: 316 DFLVDWAKSVRLCANRFNKSNFFIPGE 342 >SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Schizosaccharomyces pombe|chr 1|||Manual Length = 794 Score = 25.0 bits (52), Expect = 8.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 182 PLPLRRGKKSLREPNQYVQRITASRSVMK 268 PLP R K S+R + +++TAS MK Sbjct: 418 PLPERLQKDSMRRSSPLNEKVTASSERMK 446 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,447,645 Number of Sequences: 5004 Number of extensions: 47702 Number of successful extensions: 116 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 113 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 273658928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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