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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J21
         (621 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy...   180   1e-46
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|...   178   5e-46
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom...   177   8e-46
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra...    27   1.7  
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe...    27   2.2  
SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2 |Schizosacc...    27   2.2  
SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo...    26   3.8  
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S...    25   8.8  
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc...    25   8.8  

>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 251

 Score =  180 bits (439), Expect = 1e-46
 Identities = 88/179 (49%), Positives = 119/179 (66%)
 Frame = +1

Query: 82  SKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKER 261
           SK+    PES+                   ++++A  KKR+ I KRAE     +YR  ER
Sbjct: 10  SKEQIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESY-DAEYRKAER 68

Query: 262 DEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLN 441
           ++I L R+AR  GNYYVP E KL FVIRIRG+N + PK RK++QL RL QINNGVFV+ N
Sbjct: 69  EQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFN 128

Query: 442 KATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           KAT  ML++ EPY+ +G PNLK+VREL+YKRGF K+N +R+ ++ N++IE  L K +I+
Sbjct: 129 KATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSIL 187


>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
           L7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 250

 Score =  178 bits (434), Expect = 5e-46
 Identities = 84/172 (48%), Positives = 116/172 (67%)
 Frame = +1

Query: 103 PESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLAR 282
           PES+                   +++SA  KKR+ I KRAE     +YR  ER++I LAR
Sbjct: 16  PESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAY-EAEYRAAEREQIELAR 74

Query: 283 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 462
           +AR  GNY+VP E KL FV+RIRG+N + PK RK++QL RL QINNG+FV+ NKA   ML
Sbjct: 75  KARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEML 134

Query: 463 RIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           ++ EPY+ +G PN K+VREL+YKRGF K+N +R+P++ N++IE  L K +I+
Sbjct: 135 QVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSIL 186


>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
           L7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 249

 Score =  177 bits (432), Expect = 8e-46
 Identities = 84/150 (56%), Positives = 111/150 (74%)
 Frame = +1

Query: 169 LKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRI 348
           + ++ A  K RKE FKRAE   + +YR +ER+ IRL R A+N+G+ +VP E KL FVIRI
Sbjct: 37  IAKKEAQKKNRKETFKRAETFIN-NYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRI 95

Query: 349 RGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVY 528
            GV  + PK+RKVL+L RL +INN VFVR NKA   MLRI EPY+ +G PNL SVREL+Y
Sbjct: 96  AGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIY 155

Query: 529 KRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           KRGF K+NG+R+ ++ N+LIE+ L K ++I
Sbjct: 156 KRGFGKINGQRIALSDNALIEEALGKYDVI 185


>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
            transporting Cta4 |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1211

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 286  ARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 405
            + N+G YY  G   +AFV  I GV + SP++   LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169


>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 560

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 496 PNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           P LK+ REL+ K+   +     V   SN ++EK L   +II
Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463


>SPBC887.11 |pus2||tRNA pseudouridylate synthase Pus2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 451

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 196 KRKEIFKRAEPICSKDYRIKERDEIRLARQ 285
           K K+  K+AE  C  +YRIKE D +++ +Q
Sbjct: 251 KLKKALKQAEYYCYMNYRIKE-DRLKVLQQ 279


>SPAC3A12.17c |cys12|cys1b|cysteine synthase
           Cys12|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 395

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 15/69 (21%), Positives = 28/69 (40%)
 Frame = +1

Query: 190 IKKRKEIFKRAEPICSKDYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVS 369
           I +    F  AEP+    YR+ +   + ++R        +V   + +  V  +R   ++ 
Sbjct: 292 INRMTRNFSIAEPLIDMAYRVTDEQAVAMSRYLVTHDGLFVGSSSAVNCVAAVRLAKKLG 351

Query: 370 PKVRKVLQL 396
           P  R V  L
Sbjct: 352 PGHRIVTLL 360


>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
           Mok11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2397

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 241 DYRIKERDEIRLARQARNRGNYYVPGE 321
           D+ +     +RL     N+ N+++PGE
Sbjct: 316 DFLVDWAKSVRLCANRFNKSNFFIPGE 342


>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
           Pms1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 794

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 182 PLPLRRGKKSLREPNQYVQRITASRSVMK 268
           PLP R  K S+R  +   +++TAS   MK
Sbjct: 418 PLPERLQKDSMRRSSPLNEKVTASSERMK 446


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,447,645
Number of Sequences: 5004
Number of extensions: 47702
Number of successful extensions: 116
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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