BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J21 (621 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 188 3e-48 04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351... 182 3e-46 08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 109 2e-24 09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 27 9.1 03_05_1068 + 30114682-30114868,30114947-30115239,30115354-301155... 27 9.1 >08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102, 8148192-8148271,8148770-8148872,8148966-8149181 Length = 245 Score = 188 bits (458), Expect = 3e-48 Identities = 89/178 (50%), Positives = 125/178 (70%) Frame = +1 Query: 88 KLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDE 267 K VPESV + L + +++ RK IF RA+ +++Y +E++ Sbjct: 7 KAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQY-AQEYDAQEKEL 65 Query: 268 IRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKA 447 ++L R+AR +G +YV EAKL FV+RIRG+N + PK RK+LQL RLRQI NGVF+++NKA Sbjct: 66 VQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKA 125 Query: 448 TVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621 T+NMLR EPY+A+GYPNLKSVREL+YKRG+ KLN +R+P+ +N +IE+ L K +IIC Sbjct: 126 TINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGLGKHDIIC 183 >04_04_1075 + 30634141-30634320,30634917-30635014,30635113-30635170, 30635259-30635338,30635686-30635788,30635847-30636080 Length = 250 Score = 182 bits (442), Expect = 3e-46 Identities = 89/180 (49%), Positives = 124/180 (68%), Gaps = 6/180 (3%) Frame = +1 Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279 VPESV + + + SI+ RK IF RA+ +++Y +E++ ++L Sbjct: 10 VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQY-AEEYEAQEKELVQLK 68 Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459 R+AR +G +YV E KL FV+RIRG+N + PK RK+LQL RLRQI NGVF+++NKAT+NM Sbjct: 69 REARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINM 128 Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKR------LSKQNIIC 621 LR EPY+A+GYPNLKSVREL+YKRG+ KLN +R+P+T+N +IE+ L K +IIC Sbjct: 129 LRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEESWCLYQGLGKHDIIC 188 >08_02_1442 + 27120604-27120890,27121029-27121166,27121280-27121382, 27121877-27122036,27122927-27123114,27123203-27124770, 27124882-27125869,27126595-27127098,27127347-27127433, 27127753-27127821,27128012-27128041 Length = 1373 Score = 109 bits (262), Expect = 2e-24 Identities = 64/186 (34%), Positives = 101/186 (54%), Gaps = 3/186 (1%) Frame = +1 Query: 73 KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRI 252 +E +++LP V E+V + +R K KR E +++R Sbjct: 3 EEGTQQLPYVRETVLKKRKVNEDWAVKNRERKAAKRQRRRDDGKGAIKRPEDFV-REFRN 61 Query: 253 KERDEIRLARQARNRGNYYVPGE---AKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNG 423 KE D +R+ + + R P E +KL F IRI G + P +R++L+ RL Q+ G Sbjct: 62 KELDFVRMKTRLKVRK--LPPAETLNSKLVFAIRIPGTMDLHPHMRRILRKLRLTQVLTG 119 Query: 424 VFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLS 603 VF++ AT+ L + EP+I +G+PNLK+V++L+YK+G L+ + P+TSN LIEK L Sbjct: 120 VFLKATDATMKRLLVVEPFITYGFPNLKNVKDLIYKKGRGFLDKEPFPLTSNDLIEKALG 179 Query: 604 KQNIIC 621 + IIC Sbjct: 180 EYGIIC 185 >09_04_0087 + 14476539-14476675,14478876-14479635,14479720-14479871, 14479958-14480024,14480632-14480831,14480915-14481068, 14481585-14481669,14481766-14481857,14482575-14482766, 14482867-14482992,14483072-14483125,14483494-14483550, 14484509-14484606,14484703-14485038,14485116-14485203, 14486891-14487016,14487082-14487138,14488054-14488133, 14488228-14488270,14488948-14489034,14489331-14489420, 14489996-14490054,14490141-14490231,14490330-14490495, 14490662-14490755,14491787-14492909 Length = 1537 Score = 27.5 bits (58), Expect = 9.1 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +3 Query: 75 RGQ*EVASCSGISLEAP*KEGGTPSSPSSDHTQEAFRFH*EEERNL*ESRTNM 233 R + E CS +S++AP E P + S+ + +E H E+ + + + M Sbjct: 1303 RNENEAGPCSSMSVDAPMTEAPEPVNVSNHNIEEQNSCHDREQNSCHDRESRM 1355 >03_05_1068 + 30114682-30114868,30114947-30115239,30115354-30115591, 30115977-30117871 Length = 870 Score = 27.5 bits (58), Expect = 9.1 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -2 Query: 602 LSLFSMSELEVIGTRFPFSLAKPRLYTNSRTLFKLG*PHAI 480 L L S+ LE + RFP L K + L KL PH I Sbjct: 310 LKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVI 350 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,443,619 Number of Sequences: 37544 Number of extensions: 329067 Number of successful extensions: 825 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 794 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 825 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1502076244 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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