Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J21
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.5  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   5.5  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 208 IFKRAEPICSKDYRIKERDEIRL 276
           I +  + + S  YR+KER EI +
Sbjct: 562 ISQSTKELLSPSYRVKERGEIEV 584


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 350 VVSTKYHPRYARYCSCSGCVRSTTACSFVSTR 445
           V+S KY   +   C CS    S T     S R
Sbjct: 318 VMSAKYRNAFKETCRCSPSNPSITRTGLSSVR 349


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 160 QITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258
           Q T++R  +S +  K I K  + IC++ Y+I++
Sbjct: 101 QTTIEREFSSTEM-KAIMKVDDIICTRVYKIQD 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,290
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)