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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J21
         (621 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)             187   5e-48
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)             187   5e-48
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila...   186   8e-48
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila...   186   8e-48
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila...   186   8e-48
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)             184   4e-47
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila...   106   1e-23
At1g26540.1 68414.m03234 agenet domain-containing protein contai...    29   1.9  
At4g32010.1 68417.m04557 transcriptional factor B3 family protei...    28   5.7  
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu...    27   7.6  

>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 
          Length = 247

 Score =  187 bits (456), Expect = 5e-48
 Identities = 89/174 (51%), Positives = 121/174 (69%)
 Frame = +1

Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279
           VPESV                  +  +  S++ RK IFKRAE   +K+Y  K+ + IRL 
Sbjct: 13  VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQY-AKEYAEKDNELIRLK 71

Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459
           R+A+ +G +YV  EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNM
Sbjct: 72  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 131

Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621
           LR  EPY+ +GYPNLKSV+EL+YKRG+ KLN +R+ +T NS++++ L K  IIC
Sbjct: 132 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 185


>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 
          Length = 242

 Score =  187 bits (456), Expect = 5e-48
 Identities = 89/174 (51%), Positives = 121/174 (69%)
 Frame = +1

Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279
           VPESV                  +  +  S++ RK IFKRAE   +K+Y  K+ + IRL 
Sbjct: 8   VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQY-AKEYAEKDNELIRLK 66

Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459
           R+A+ +G +YV  EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126

Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621
           LR  EPY+ +GYPNLKSV+EL+YKRG+ KLN +R+ +T NS++++ L K  IIC
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 180


>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
           to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
           [Arabidopsis thaliana]
          Length = 244

 Score =  186 bits (454), Expect = 8e-48
 Identities = 90/181 (49%), Positives = 124/181 (68%)
 Frame = +1

Query: 79  DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258
           +++    VPESV               Q     +  + +KRK IF RA+   SK+Y+ KE
Sbjct: 3   EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQY-SKEYQEKE 61

Query: 259 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 438
           R+ I+L R+A+ +G +YV  EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++
Sbjct: 62  RELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 121

Query: 439 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           NKAT+NMLR  EPY+ +GYPNLKSV+EL+YKRGF KLN +R  +T NS++++ L K  II
Sbjct: 122 NKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGII 181

Query: 619 C 621
           C
Sbjct: 182 C 182


>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
           to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
           [Arabidopsis thaliana]
          Length = 244

 Score =  186 bits (454), Expect = 8e-48
 Identities = 90/181 (49%), Positives = 124/181 (68%)
 Frame = +1

Query: 79  DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258
           +++    VPESV               Q     +  + +KRK IF RA+   SK+Y+ KE
Sbjct: 3   EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQY-SKEYQEKE 61

Query: 259 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 438
           R+ I+L R+A+ +G +YV  EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++
Sbjct: 62  RELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 121

Query: 439 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           NKAT+NMLR  EPY+ +GYPNLKSV+EL+YKRGF KLN +R  +T NS++++ L K  II
Sbjct: 122 NKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGII 181

Query: 619 C 621
           C
Sbjct: 182 C 182


>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
           to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
           [Arabidopsis thaliana]
          Length = 244

 Score =  186 bits (454), Expect = 8e-48
 Identities = 90/181 (49%), Positives = 124/181 (68%)
 Frame = +1

Query: 79  DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258
           +++    VPESV               Q     +  + +KRK IF RA+   SK+Y+ KE
Sbjct: 3   EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQY-SKEYQEKE 61

Query: 259 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 438
           R+ I+L R+A+ +G +YV  EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++
Sbjct: 62  RELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 121

Query: 439 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618
           NKAT+NMLR  EPY+ +GYPNLKSV+EL+YKRGF KLN +R  +T NS++++ L K  II
Sbjct: 122 NKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGII 181

Query: 619 C 621
           C
Sbjct: 182 C 182


>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
          Length = 242

 Score =  184 bits (448), Expect = 4e-47
 Identities = 89/174 (51%), Positives = 120/174 (68%)
 Frame = +1

Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279
           VPESV               Q     +  + + RK IFKRAE   SK+Y  KE++ I L 
Sbjct: 8   VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQY-SKEYAEKEKELISLK 66

Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459
           R+A+ +G +YV  EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNM 126

Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621
           LR  EPY+ +G+PNLKSV+EL+YKRG+ KLN +R+ +T NS++E+ L K  IIC
Sbjct: 127 LRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIIC 180


>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
           to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
           sapiens]
          Length = 247

 Score =  106 bits (255), Expect = 1e-23
 Identities = 56/182 (30%), Positives = 96/182 (52%)
 Frame = +1

Query: 73  KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRI 252
           +E++K L  +PE V               +      S   KK+    KR E     ++R 
Sbjct: 3   EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVH-EFRA 61

Query: 253 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFV 432
           KE D IR+ ++ +   +   P ++ L F+IRI+G N + PK +++L   +L+ +  GVF 
Sbjct: 62  KEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFA 121

Query: 433 RLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQN 612
           +   +    L   +PY+ +GYPN KSV++L+YK+G   + G  VP+T N++IE+ L +  
Sbjct: 122 KATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHK 181

Query: 613 II 618
           I+
Sbjct: 182 IL 183


>At1g26540.1 68414.m03234 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 695

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 371 GDTWLTPRIRMTNASLASPGT 309
           G TW+ P I  +N S+ SPGT
Sbjct: 138 GGTWIQPEIEESNKSMFSPGT 158


>At4g32010.1 68417.m04557 transcriptional factor B3 family protein
           low similarity to FUSCA3 [Arabidopsis thaliana]
           GI:3582518, VIVIPAROUS1 protein [Triticum aestivum]
           GI:7801376; contains Pfam profile PF02362: B3 DNA
           binding domain
          Length = 780

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 19/85 (22%), Positives = 35/85 (41%)
 Frame = +2

Query: 212 LREPNQYVQRITASRSVMKSDWQDRLVTVAIIMCPVKLN*HLSSVFVVSTKYHPRYARYC 391
           +R+  ++ +R  AS +   +  QD     ++    +        + V +T  HPR+   C
Sbjct: 572 VRQSKEFKRRRLASSNEKLNQSQDASALNSLGNAGITTTGEQGEITVAATTKHPRHRAGC 631

Query: 392 SCSGCVRSTTACSFVSTRPQ*TCFV 466
           SC  C +  +       +P  TC V
Sbjct: 632 SCIVCSQPPSGKG--KHKPSCTCTV 654


>At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate
           mutase family protein similar to X4 protein GI:21386798,
           Y4 protein GI:21386800 from  [Silene dioica]; contains
           Pfam profiles PF00300: phosphoglycerate mutase family,
           PF01535: PPR repeat
          Length = 1053

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 126 TVLQD*FRNSWQLLTVLFTLHRFFLGRSLLFCS 28
           TVLQ  +RN WQ+  +  T H   L +  LFCS
Sbjct: 375 TVLQHSWRNGWQIKRMNDTAH-LRLFKKALFCS 406


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,059,399
Number of Sequences: 28952
Number of extensions: 258787
Number of successful extensions: 643
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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