BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J21 (621 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 187 5e-48 At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 187 5e-48 At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 186 8e-48 At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 186 8e-48 At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 186 8e-48 At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 184 4e-47 At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 106 1e-23 At1g26540.1 68414.m03234 agenet domain-containing protein contai... 29 1.9 At4g32010.1 68417.m04557 transcriptional factor B3 family protei... 28 5.7 At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu... 27 7.6 >At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) Length = 247 Score = 187 bits (456), Expect = 5e-48 Identities = 89/174 (51%), Positives = 121/174 (69%) Frame = +1 Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279 VPESV + + S++ RK IFKRAE +K+Y K+ + IRL Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQY-AKEYAEKDNELIRLK 71 Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459 R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNM Sbjct: 72 REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 131 Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621 LR EPY+ +GYPNLKSV+EL+YKRG+ KLN +R+ +T NS++++ L K IIC Sbjct: 132 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 185 >At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) Length = 242 Score = 187 bits (456), Expect = 5e-48 Identities = 89/174 (51%), Positives = 121/174 (69%) Frame = +1 Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279 VPESV + + S++ RK IFKRAE +K+Y K+ + IRL Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQY-AKEYAEKDNELIRLK 66 Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459 R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNM Sbjct: 67 REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126 Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621 LR EPY+ +GYPNLKSV+EL+YKRG+ KLN +R+ +T NS++++ L K IIC Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIIC 180 >At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from [Arabidopsis thaliana] Length = 244 Score = 186 bits (454), Expect = 8e-48 Identities = 90/181 (49%), Positives = 124/181 (68%) Frame = +1 Query: 79 DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258 +++ VPESV Q + + +KRK IF RA+ SK+Y+ KE Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQY-SKEYQEKE 61 Query: 259 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 438 R+ I+L R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++ Sbjct: 62 RELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 121 Query: 439 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 NKAT+NMLR EPY+ +GYPNLKSV+EL+YKRGF KLN +R +T NS++++ L K II Sbjct: 122 NKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGII 181 Query: 619 C 621 C Sbjct: 182 C 182 >At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from [Arabidopsis thaliana] Length = 244 Score = 186 bits (454), Expect = 8e-48 Identities = 90/181 (49%), Positives = 124/181 (68%) Frame = +1 Query: 79 DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258 +++ VPESV Q + + +KRK IF RA+ SK+Y+ KE Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQY-SKEYQEKE 61 Query: 259 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 438 R+ I+L R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++ Sbjct: 62 RELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 121 Query: 439 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 NKAT+NMLR EPY+ +GYPNLKSV+EL+YKRGF KLN +R +T NS++++ L K II Sbjct: 122 NKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGII 181 Query: 619 C 621 C Sbjct: 182 C 182 >At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from [Arabidopsis thaliana] Length = 244 Score = 186 bits (454), Expect = 8e-48 Identities = 90/181 (49%), Positives = 124/181 (68%) Frame = +1 Query: 79 DSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKE 258 +++ VPESV Q + + +KRK IF RA+ SK+Y+ KE Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQY-SKEYQEKE 61 Query: 259 RDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRL 438 R+ I+L R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++ Sbjct: 62 RELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKV 121 Query: 439 NKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 618 NKAT+NMLR EPY+ +GYPNLKSV+EL+YKRGF KLN +R +T NS++++ L K II Sbjct: 122 NKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGII 181 Query: 619 C 621 C Sbjct: 182 C 182 >At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) Length = 242 Score = 184 bits (448), Expect = 4e-47 Identities = 89/174 (51%), Positives = 120/174 (68%) Frame = +1 Query: 100 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRIKERDEIRLA 279 VPESV Q + + + RK IFKRAE SK+Y KE++ I L Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQY-SKEYAEKEKELISLK 66 Query: 280 RQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNM 459 R+A+ +G +YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NM Sbjct: 67 REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNM 126 Query: 460 LRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIIC 621 LR EPY+ +G+PNLKSV+EL+YKRG+ KLN +R+ +T NS++E+ L K IIC Sbjct: 127 LRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIIC 180 >At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo sapiens] Length = 247 Score = 106 bits (255), Expect = 1e-23 Identities = 56/182 (30%), Positives = 96/182 (52%) Frame = +1 Query: 73 KEDSKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEPICSKDYRI 252 +E++K L +PE V + S KK+ KR E ++R Sbjct: 3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVH-EFRA 61 Query: 253 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFV 432 KE D IR+ ++ + + P ++ L F+IRI+G N + PK +++L +L+ + GVF Sbjct: 62 KEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFA 121 Query: 433 RLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQN 612 + + L +PY+ +GYPN KSV++L+YK+G + G VP+T N++IE+ L + Sbjct: 122 KATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHK 181 Query: 613 II 618 I+ Sbjct: 182 IL 183 >At1g26540.1 68414.m03234 agenet domain-containing protein contains Pfam PF05641: Agenet domain Length = 695 Score = 29.5 bits (63), Expect = 1.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -2 Query: 371 GDTWLTPRIRMTNASLASPGT 309 G TW+ P I +N S+ SPGT Sbjct: 138 GGTWIQPEIEESNKSMFSPGT 158 >At4g32010.1 68417.m04557 transcriptional factor B3 family protein low similarity to FUSCA3 [Arabidopsis thaliana] GI:3582518, VIVIPAROUS1 protein [Triticum aestivum] GI:7801376; contains Pfam profile PF02362: B3 DNA binding domain Length = 780 Score = 27.9 bits (59), Expect = 5.7 Identities = 19/85 (22%), Positives = 35/85 (41%) Frame = +2 Query: 212 LREPNQYVQRITASRSVMKSDWQDRLVTVAIIMCPVKLN*HLSSVFVVSTKYHPRYARYC 391 +R+ ++ +R AS + + QD ++ + + V +T HPR+ C Sbjct: 572 VRQSKEFKRRRLASSNEKLNQSQDASALNSLGNAGITTTGEQGEITVAATTKHPRHRAGC 631 Query: 392 SCSGCVRSTTACSFVSTRPQ*TCFV 466 SC C + + +P TC V Sbjct: 632 SCIVCSQPPSGKG--KHKPSCTCTV 654 >At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mutase family protein similar to X4 protein GI:21386798, Y4 protein GI:21386800 from [Silene dioica]; contains Pfam profiles PF00300: phosphoglycerate mutase family, PF01535: PPR repeat Length = 1053 Score = 27.5 bits (58), Expect = 7.6 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -1 Query: 126 TVLQD*FRNSWQLLTVLFTLHRFFLGRSLLFCS 28 TVLQ +RN WQ+ + T H L + LFCS Sbjct: 375 TVLQHSWRNGWQIKRMNDTAH-LRLFKKALFCS 406 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,059,399 Number of Sequences: 28952 Number of extensions: 258787 Number of successful extensions: 643 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 619 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 641 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1255974912 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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