Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J20
(383 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 29 0.33
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 0.76
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 26 2.3
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 3.1
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 4.1
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 5.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 5.4
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 24 7.1
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 24 7.1
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 24 7.1
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 24 7.1
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 24 7.1
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 24 7.1
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 24 7.1
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 24 7.1
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 24 7.1
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 24 7.1
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 24 7.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 24 7.1
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 24 7.1
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 24 9.4
SPAPJ695.01c |||S. pombe specific UPF0321 family protein 3|Schiz... 24 9.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 24 9.4
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 24 9.4
SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit Nse5|Schizosacc... 24 9.4
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 24 9.4
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 28.7 bits (61), Expect = 0.33
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 128 PRRPA-ADMGTNRRDISTYIPHLNFQGPQRVSGH 30
PR P A GT++ +IST +P P++VSGH
Sbjct: 365 PRHPLNATNGTSQSNISTPLPEPTPGQPRKVSGH 398
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.5 bits (58), Expect = 0.76
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 296 FPYKFNVPPYFSKTNDVPK 352
FPY + PPY S T+++P+
Sbjct: 730 FPYNTSYPPYMSPTSNMPQ 748
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 2.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 274 EDILKEHIRLFEARRVRWTVLRANP 200
E+ILK H +LF RW++ P
Sbjct: 362 ENILKHHDQLFSVEITRWSIYSRYP 386
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 3.1
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -3
Query: 279 YTKTSLKNILGSLKHVESAGRSSEPILIPKLRIQFADFPYLHYSID*RLFTSETCCGYGY 100
++ +L++ L + K++ S ++SE + P L +P+ S+D R+F E+ GY
Sbjct: 129 FSDDTLQDTLETEKNLNS--KTSESLKSPTL-----SYPFDLDSLDKRIFKLESKIGYAD 181
Query: 99 EPARHL 82
EP L
Sbjct: 182 EPLSEL 187
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.0 bits (52), Expect = 4.1
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 167 SLTYIILS-TRGSSPRRPAADMGTNRRDISTYIP 69
S++YI S +RGS PRRP++ + TN I+ P
Sbjct: 728 SISYIEDSPSRGSLPRRPSSALLTNPISITKSNP 761
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 24.6 bits (51), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 275 VYHEGEHFPYKF--NVPPYFSKT 337
VYH GE P++F N+ + KT
Sbjct: 3568 VYHNGEIVPFRFTPNIKEFIGKT 3590
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 24.6 bits (51), Expect = 5.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 270 TSLKNILGSLKHVESAGRSSEPILIPKLRIQFADFPYLHY 151
T++++ L L+H E A R +P P +QF + +Y
Sbjct: 3959 TNIEDTLRFLRHDEEAKRFLDPFKNPPYYVQFFEIGAKNY 3998
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 24.2 bits (50), Expect = 7.1
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -1
Query: 194 RSYGSNLPTSLTYIILSTRGSSPRRPAADM 105
+ YGSN+ + +T +L+ + +R ++DM
Sbjct: 156 KEYGSNVDSLITSFVLTCKNLHRKRYSSDM 185
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 231 RRASKSLICSLRMSSYTTKASTFLTNSTFPLTFLKPMMFLN 353
R + LI + S+ TT STF + S+ + +KP+ L+
Sbjct: 3919 REITTILITASDGSAVTTSLSTFYSASSLASSVVKPLYILS 3959
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 355 LFRNIIGFRKVRGNVEFVRKVLAFVVYEDILKEHIRLF 242
L + GFR V+F+RK+++ +D H RLF
Sbjct: 126 LTKTFEGFRNQLDKVQFIRKLMSKANVDDF---HTRLF 160
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 23.8 bits (49), Expect = 9.4
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -2
Query: 229 VRWTVLRANPYSEVTDPICRLPLPTLFYRLEALHL 125
+RW + N Y+E++D +L L ++ + L
Sbjct: 278 LRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 312
>SPAPJ695.01c |||S. pombe specific UPF0321 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 23.8 bits (49), Expect = 9.4
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 210 LRTVQRTRRASKSLICSLRMSSYTTKASTFLTNS-TFPLTFLKPMMFLNN 356
+ V + + +C L YTT F TNS P TF + LN+
Sbjct: 63 VNNVTEINNDTDAYLCQLLTGQYTTDCYIFDTNSDDKPETFNSSIHLLNS 112
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 114 CGYGYEPARHLHVHPSPEFSRSAESIRTPP 25
C Y E RH H P E + + I T P
Sbjct: 1217 CDYRVEVPRHSHRPPLIELQKMVDDIPTLP 1246
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 276 YTTKASTFLTNSTFPLTFL 332
Y+T ST+L NST L+ L
Sbjct: 164 YSTYTSTYLPNSTIDLSIL 182
>SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit
Nse5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 23.8 bits (49), Expect = 9.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 378 LGSSNISYCLGTSLVLEK*GGTLNL 304
LG+SN+ YCL ++++ G +N+
Sbjct: 266 LGASNLRYCLSQYILMKGIGIGINI 290
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 23.8 bits (49), Expect = 9.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 199 YSEVTDPICRLPLPTLFYRLEALHLG 122
Y + + L +P+L RL A+HLG
Sbjct: 1093 YKAKSSLLVTLKIPSLIPRLRAIHLG 1118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,628,332
Number of Sequences: 5004
Number of extensions: 32831
Number of successful extensions: 114
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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