Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J19
         (430 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C562 Cluster: SJCHGC04352 protein; n=1; Schistosoma j...    33   3.3  
UniRef50_Q9AIM5 Cluster: Ribosomal protein S3; n=1; Candidatus C...    31   7.7  

>UniRef50_Q5C562 Cluster: SJCHGC04352 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04352 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 213

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +3

Query: 72  RHNFYEFEKLKTCPFYNFSN*VLLLNAATSNLSKNHQSQHLPGSRVSVPDFQGSGSLR 245
           RHN +    L    F NF N + + N  T+N + N   Q L G   S      +GSLR
Sbjct: 26  RHNSFPNNSLSR--FQNFDNYLTVSNVKTTNNNTNQSQQFLLGRSTSYSSSMWNGSLR 81


>UniRef50_Q9AIM5 Cluster: Ribosomal protein S3; n=1; Candidatus
           Carsonella ruddii|Rep: Ribosomal protein S3 - Carsonella
           ruddii
          Length = 148

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -2

Query: 192 DAVIDDSLIN*MWLRSITTLSSKNYKKDMFSIFQTHKSYV*NIMLKSVYNFLIRNKKI 19
           D +I + LI  +++ ++  L+      D+F IFQ  K    NI+L  V+N+++  K I
Sbjct: 56  DIIISNKLIINLYINNVDLLNDIENYLDIF-IFQISKILKKNIILNFVFNYVLNAKNI 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,412,181
Number of Sequences: 1657284
Number of extensions: 6474452
Number of successful extensions: 17418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17405
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)