Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J19
         (430 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64601-10|AAP40523.1|   91|Caenorhabditis elegans Hypothetical p...    29   1.9  
U64601-9|AAB04578.1|  314|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF228528-1|AAF34189.1|  314|Caenorhabditis elegans calumenin-lik...    29   1.9  
Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical ...    27   4.3  
AF077537-14|AAC26283.1|  556|Caenorhabditis elegans Hypothetical...    27   4.3  
Z27080-1|CAA81600.1|  257|Caenorhabditis elegans Hypothetical pr...    27   7.5  

>U64601-10|AAP40523.1|   91|Caenorhabditis elegans Hypothetical
           protein M03F4.7b protein.
          Length = 91

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 365 DHLSDAEHYRNEHHNKQFDHD 427
           D   D EH++ + H+K++DH+
Sbjct: 22  DPSKDGEHFKGKEHDKKYDHE 42


>U64601-9|AAB04578.1|  314|Caenorhabditis elegans Hypothetical
           protein M03F4.7a protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 365 DHLSDAEHYRNEHHNKQFDHD 427
           D   D EH++ + H+K++DH+
Sbjct: 22  DPSKDGEHFKGKEHDKKYDHE 42


>AF228528-1|AAF34189.1|  314|Caenorhabditis elegans calumenin-like
           protein protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 365 DHLSDAEHYRNEHHNKQFDHD 427
           D   D EH++ + H+K++DH+
Sbjct: 22  DPSKDGEHFKGKEHDKKYDHE 42


>Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical
           protein W07A8.2b protein.
          Length = 1021

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -2

Query: 231 IPENRERKRGSREDAVIDDSLIN*MWLRSITTLSSKNYKKDMFSIFQTHK 82
           + +N + K+   ++A  ++ L N        TL ++N +K + S+F++HK
Sbjct: 189 LTDNEDPKKKKEKEAKEEEELKNKPLYHLAITLYNENNEKYVMSLFRSHK 238


>AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical
           protein W07A8.2b protein.
          Length = 1021

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -2

Query: 231 IPENRERKRGSREDAVIDDSLIN*MWLRSITTLSSKNYKKDMFSIFQTHK 82
           + +N + K+   ++A  ++ L N        TL ++N +K + S+F++HK
Sbjct: 189 LTDNEDPKKKKEKEAKEEEELKNKPLYHLAITLYNENNEKYVMSLFRSHK 238


>AF077537-14|AAC26283.1|  556|Caenorhabditis elegans Hypothetical
           protein F16G10.15 protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 135 LSSKNYKKDMFSIFQTHKSYV*NIMLKSV 49
           L+  NY  DMF IF+  K+ + ++ LK +
Sbjct: 320 LNKSNYSNDMFHIFKNQKNALSDLSLKFI 348


>Z27080-1|CAA81600.1|  257|Caenorhabditis elegans Hypothetical
           protein F55H2.2 protein.
          Length = 257

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 315 ETAKATNRDLSILTSCKVPRQQNHVNFLIPENRERKR 205
           E  K TNR ++ +    +PR +N + +++ E  E +R
Sbjct: 162 EAIKVTNRRVNAIEHVIIPRIENTLTYIVTELDEMER 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,679,403
Number of Sequences: 27780
Number of extensions: 164081
Number of successful extensions: 499
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)