BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J18 (557 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_2391| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003 SB_52639| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 1.9 SB_56369| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 4.5 SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5 SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 28 5.9 SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9 SB_52196| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9 >SB_2391| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 282 Score = 38.7 bits (86), Expect = 0.003 Identities = 17/63 (26%), Positives = 32/63 (50%) Frame = +2 Query: 266 EIKSFAEVEQTVKTAKCECGDKEHAFLAIKEIDDNYYVVYSAPFTPNGLTLIVLNARTIP 445 ++ F ++ +K K C K HA E+ ++ + Y FTPN +++++ TIP Sbjct: 192 DVHRFEKISNIIKQFKLSCS-KLHAHFQSMEVKNSGFAAYIDVFTPNTYVMVIMSDTTIP 250 Query: 446 TQA 454 + A Sbjct: 251 SAA 253 >SB_52639| Best HMM Match : 7tm_1 (HMM E-Value=0) Length = 359 Score = 29.5 bits (63), Expect = 1.9 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -2 Query: 337 VLFVTAFTFRCFHRLFYFCEGFYFHGCESCIRILI*FLFNRN*RD 203 ++F + TF CF + FYF F H S I + FN N R+ Sbjct: 267 IMFFSPQTFPCFSKPFYFVSLFLGHS-NSAINPFLYSFFNANFRE 310 >SB_56369| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 328 Score = 29.1 bits (62), Expect = 2.6 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Frame = +2 Query: 200 NVPLISIKQESDKNSDARFAAVEIKSFAEVEQTVKTAKCECGD--KEHAFLAIKEIDDNY 373 N L+++ DKN RF + ++ E+ AK ++H + A++ DD Sbjct: 89 NAGLLTLDPIEDKN---RFYGQLLDAYNWHEKLNTEAKQAAASLKRQHPY-AVRRTDDGP 144 Query: 374 YVVYSAPFTPNGLTLIVLNARTIPTQADLDKTVCGI 481 P TPN L+++V R T+ D+ CGI Sbjct: 145 IKRPRPPLTPNRLSVLVSALRLFETK--FDRVRCGI 178 >SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) Length = 869 Score = 28.3 bits (60), Expect = 4.5 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Frame = +2 Query: 101 IGISPNITELGTGCDWFTVTKVSEVHCTCDGXTNVPLISIKQE--SDKNSDAR----FAA 262 I I+P I ++ T FTV + +E+ CTC I K SD+NS R + A Sbjct: 123 IRIAPQIIDITTNFT-FTVGQTAELMCTCYFNALDDTIEFKWHAISDRNSVCRNPFSYNA 181 Query: 263 VEIKSFAEVEQTVKTAKCECGD 328 V +KS + + V GD Sbjct: 182 VVVKSDDDNDDGVSDVDDASGD 203 >SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1020 Score = 28.3 bits (60), Expect = 4.5 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -3 Query: 315 HFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTLVXPSQVQWTSLTLVTVNQSQP 136 H V +C S S AN+ + + L+E + ++V W LT ++ SQ Sbjct: 171 HHLVDALCQLSTTSMESAQANKEPSLFAVAKLLETGLNNLHRARVLWKPLTAHLLDVSQV 230 Query: 135 VPSSVML 115 V S ++L Sbjct: 231 VYSIMLL 237 >SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) Length = 468 Score = 27.9 bits (59), Expect = 5.9 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = -3 Query: 288 TSAKDFISTAANRASEFLSDSCLIEINGTLVXPSQVQWTS----LTLVTVNQSQPVPSSV 121 +S D S+ ASE LS + ++ G L+ SQV W L + + + P PS++ Sbjct: 21 SSKNDSTSSCCFEASELLSTAMALKKIGKLLDISQVTWPDGFKFLKFLEMQRDLPPPSAI 80 >SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1038 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -2 Query: 340 CVLFVTAFTFRCFHRLFYFCEGFYFHGCESC 248 C F T T +CFHR + F G ++C Sbjct: 917 CQYFTTETTCKCFHRSELRQVSYIFRGAKNC 947 >SB_52196| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 428 Score = 27.5 bits (58), Expect = 7.9 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +2 Query: 263 VEIKSFAEVEQTVKTAKCECGDKEH 337 VE+ ++A+ EQ KC C K+H Sbjct: 266 VEVHTYADDEQDCCQGKCNCSHKKH 290 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,648,373 Number of Sequences: 59808 Number of extensions: 333701 Number of successful extensions: 698 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 697 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1300738331 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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