Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J16
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    26   0.30 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    26   0.30 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +3

Query: 318 NCTATGCCVPKCFAEKGNRGFPGSPGPTGI 407
           +C  T C +P CF        PG   P  +
Sbjct: 154 DCDPTQCVLPDCFCSADGTRIPGQLEPANV 183


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +3

Query: 318 NCTATGCCVPKCFAEKGNRGFPGSPGPTGI 407
           +C  T C +P CF        PG   P  +
Sbjct: 161 DCDPTQCVLPDCFCSADGTRIPGQLEPANV 190


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 211 SQGELTYLRPDRRPVVA*ILLYTTP 285
           S GE +Y  P  +P+VA   +  TP
Sbjct: 35  SDGEASYEYPREQPIVAMFEVNNTP 59


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/43 (20%), Positives = 19/43 (44%)
 Frame = -1

Query: 161  FPCRRWPSSRIYFIPFRIFVVLCANSRNRYQSSYQPIYVGCHG 33
            F   +W S     +P  +F+++CA   +  Q  +  +    +G
Sbjct: 912  FGLDQWSSFYWNLLPIAVFILVCATCSSDIQLFFAGLISAIYG 954


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/43 (20%), Positives = 19/43 (44%)
 Frame = -1

Query: 161  FPCRRWPSSRIYFIPFRIFVVLCANSRNRYQSSYQPIYVGCHG 33
            F   +W S     +P  +F+++CA   +  Q  +  +    +G
Sbjct: 912  FGLDQWSSFYWNLLPIAVFILVCATCSSDIQLFFAGLISAIYG 954


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = +3

Query: 321 CTATGCCVPKCFAEKGNRGFPG 386
           C    C +P CF  +     PG
Sbjct: 163 CDPAVCVLPDCFCSEDGTTIPG 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,690
Number of Sequences: 336
Number of extensions: 3054
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)