Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J16
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 42 6e-04
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 37 0.016
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 37 0.016
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 37 0.016
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 36 0.021
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.026
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 36 0.027
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 35 0.063
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 35 0.063
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 33 0.065
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22) 29 0.12
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 33 0.15
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 30 0.28
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 0.37
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 32 0.45
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 32 0.45
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 32 0.45
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 0.45
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 28 0.51
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 31 0.59
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 31 0.59
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.60
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 0.99
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 31 1.0
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 31 1.0
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_1632| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.4
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 30 1.4
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 30 1.4
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 30 1.4
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 30 1.4
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 1.4
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 28 1.4
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 28 1.4
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 30 1.8
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 27 2.2
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 26 3.0
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 29 4.1
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 29 4.1
SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003) 29 4.1
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 29 4.1
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 29 4.1
SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027) 29 4.1
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 28 5.5
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_1619| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 28 7.2
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 28 7.2
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 28 7.2
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 27 9.6
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 25/71 (35%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG G PG GP G G PGH+G GF GL
Sbjct: 43 KGKSGLPGDKGPVGPPGHPGHKGPTGESGPTGALGAKGQKGRMGLKGDAGYDGVDGFKGL 102
Query: 543 VGQIGPQGEPG 575
G G QG+PG
Sbjct: 103 PGPPGFQGDPG 113
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/75 (28%), Positives = 24/75 (32%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G GF G PGP G +G PG G G G
Sbjct: 95 GVDGFKGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMPGFDGTKGDP 154
Query: 546 GQIGPQGEPGMLVSR 590
G G +G PG +V R
Sbjct: 155 GDEGNEGLPGDIVPR 169
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G +G PG GPTG RG+PG +G A G +G
Sbjct: 763 GAQGNPGPQGPTGTRGIPGPQGKNGKMGPTGPRGPSGKNGEPGPQGPEGEAGANGVSGPK 822
Query: 546 GQIGPQGEPG 575
G++GP+GE G
Sbjct: 823 GEMGPEGEAG 832
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAE 437
+KG+ G PGS GP G G PG +GA+
Sbjct: 142 QKGSSGDPGSEGPVGPPGKPGMDGAK 167
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG+RG PG G +G +G GHEG
Sbjct: 558 KGDRGSPGVSGASGAKGAKGHEG 580
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/71 (29%), Positives = 24/71 (33%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G G PG GP G RG PG GA A+G G
Sbjct: 546 QGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGKRGQRGETGEQGLPGARGKQGA 605
Query: 543 VGQIGPQGEPG 575
G GP+G G
Sbjct: 606 NGPRGPRGIKG 616
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 25/78 (32%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
+P + G G G GP+G G PG +G E
Sbjct: 779 IPGPQGKNGKMGPTGPRGPSGKNGEPGPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPPG 838
Query: 522 AQGFTGLVGQIGPQGEPG 575
G G VGQ G G PG
Sbjct: 839 PPGPNGPVGQTGQPGTPG 856
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG+PGP G G PG G
Sbjct: 847 GQTGQPGTPGPDGAAGEPGARG 868
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGA 434
G+RG PG+PG G G G++G+
Sbjct: 386 GDRGQPGAPGAEGAMGEKGNQGS 408
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAE 437
G G G PG G RG PG GAE
Sbjct: 374 GEAGRQGPPGANGDRGQPGAPGAE 397
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGA 434
E G +G PG+ G G G PG EGA
Sbjct: 375 EAGRQGPPGANGDRGQPGAPGAEGA 399
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRG---LPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQG 530
++G G GSPGP G++G +PG G + +G
Sbjct: 530 QRGVTGPSGSPGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKGAKGHEGGRGKRGQRG 589
Query: 531 FTGLVGQIGPQGEPG 575
TG G G +G+ G
Sbjct: 590 ETGEQGLPGARGKQG 604
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/74 (27%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = +3
Query: 363 KGNRGFPGS---PGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGF 533
KG+RG G GP G GL G G QG
Sbjct: 726 KGSRGIAGEAGPDGPAGPAGLDGKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGK 785
Query: 534 TGLVGQIGPQGEPG 575
G +G GP+G G
Sbjct: 786 NGKMGPTGPRGPSG 799
Score = 25.8 bits (54), Expect(2) = 0.58
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG GP G G PG +G
Sbjct: 114 GRLGPPGRRGPPGQNGAPGLDG 135
Score = 24.2 bits (50), Expect(2) = 0.58
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 522 AQGFTGLVGQIGPQGEPGM 578
+ G G G +GP G+PGM
Sbjct: 145 SSGDPGSEGPVGPPGKPGM 163
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/72 (30%), Positives = 25/72 (34%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G+ G PG G G +GLPG GA+ QG G
Sbjct: 318 GSNGQPGRQGEPGKQGLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGARGKS 377
Query: 546 GQIGPQGEPGML 581
G GP G PG L
Sbjct: 378 GDFGPIGPPGPL 389
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGA 434
KG G PG+ GP G G+ G +GA
Sbjct: 129 KGGLGEPGTDGPPGDAGMQGSDGA 152
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGA 434
G +G G+PG G+RG+ G +G+
Sbjct: 297 GKQGPTGTPGTVGLRGVTGPDGS 319
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG+ GFPG PG G+RGL G EG
Sbjct: 3745 KGDPGFPGLPGQAGLRGLQGPEG 3767
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/71 (26%), Positives = 25/71 (35%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
E G G GSPG G G PG G++ +G G
Sbjct: 3603 ESGTPGLDGSPGKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGDVGPVGIRGFKGNKG 3662
Query: 540 LVGQIGPQGEP 572
+ G++GP G P
Sbjct: 3663 MKGEVGPPGPP 3673
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
EKGN G PGS G TG RG G G
Sbjct: 3711 EKGNTGAPGSQGSTGPRGPIGQPG 3734
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
+KG RGFPG+ G G RG G G
Sbjct: 3687 DKGERGFPGNNGGKGERGAQGPRG 3710
Score = 29.9 bits (64), Expect(2) = 0.14
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G GSPG TG G+PG G
Sbjct: 3468 GPPGLAGSPGQTGAPGIPGRNG 3489
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIR---GLPGHEG 431
KG++GFPG G G+R GLPG G
Sbjct: 3330 KGDKGFPGMVGFPGLRGKTGLPGKPG 3355
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPG 422
+KG+ G PG PG G +G+PG
Sbjct: 3768 QKGSIGAPGIPGKIGEKGVPG 3788
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E+G +G PG G G +G PG G
Sbjct: 3317 EQGPQGPPGLKGIKGDKGFPGMVG 3340
Score = 22.2 bits (45), Expect(2) = 0.14
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 522 AQGFTGLVGQIGPQGEPGMLVSRSRR 599
A G G G GP G PG+ S R
Sbjct: 3481 APGIPGRNGTAGPPGFPGLKGSPGER 3506
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGM 578
+GF G+VG G +G+ G+
Sbjct: 3333 KGFPGMVGFPGLRGKTGL 3350
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/78 (29%), Positives = 28/78 (35%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
+P EKG+ G PG PG G RG G +G
Sbjct: 1335 MPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPTGPKGESGIAGLDG 1394
Query: 522 AQGFTGLVGQIGPQGEPG 575
+G GL G+ GP GE G
Sbjct: 1395 PKGEPGLPGRDGPAGEKG 1412
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPG---SPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXX 512
+P EKG+ GFPG PGP G RG G G
Sbjct: 1474 IPGPRGEKGDSGFPGINGPPGPPGQRGYEGARGPPGAKGQAGEDGRPGVPGRRFVLVKTV 1533
Query: 513 XXXAQGFTGLVGQIGPQGEPGM 578
GF G+ G +G +G G+
Sbjct: 1534 KGREDGFPGIEGPLGEKGATGL 1555
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P EKG+ G PG G TG GLPG +G
Sbjct: 1132 PGSLGEKGDAGIPGQRGLTGNPGLPGAQG 1160
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/73 (27%), Positives = 26/73 (35%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
E G G PG G G G+PG G +G +G
Sbjct: 1329 ETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVDGPTGPKGESG 1388
Query: 540 LVGQIGPQGEPGM 578
+ G GP+GEPG+
Sbjct: 1389 IAGLDGPKGEPGL 1401
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 321 CTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
C A P E G+ G PG G G RGLPG G
Sbjct: 667 CEACPKPPPGPAGEPGSPGLPGEDGAIGSRGLPGPSG 703
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG--AEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFT 536
KG+ G PG PG G+ G PG +G + +G
Sbjct: 557 KGDPGPPGPPGEVGVPGAPGMKGPIGKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPR 616
Query: 537 GLVGQIGPQGEPG 575
G +G+ GP G PG
Sbjct: 617 GPIGEKGPTGFPG 629
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGA 434
G G G PGP G GLPG GA
Sbjct: 906 GRDGMKGDPGPRGRDGLPGEPGA 928
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
P + G+RG PG GP G G+ G +GA+
Sbjct: 926 PGARGDIGSRGLPGEDGPRGPPGIQGMKGAK 956
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
+KG+RG PG GP G G G +G
Sbjct: 1422 DKGDRGLPGPSGPPGEEGARGSDG 1445
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G+ GFPG PG G RGL G +G
Sbjct: 1441 RGSDGFPGIPGSKGERGLIGPKG 1463
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/70 (27%), Positives = 24/70 (34%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G RG+ G+ GP G +G G +G +G TGL
Sbjct: 1497 GQRGYEGARGPPGAKGQAGEDGRPGVPGRRFVLVKTVKGREDGFPGIEGPLGEKGATGLP 1556
Query: 546 GQIGPQGEPG 575
G G G PG
Sbjct: 1557 GLTGSIGVPG 1566
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
EKG G PG PG GI G G G
Sbjct: 376 EKGEEGRPGLPGAQGIEGPKGERG 399
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIR---GLPGHEG-----AEXXXXXXXXXXXXXXXXXXXXXXXXXXX 518
KG +G G+PGP G+R G PG +G E
Sbjct: 751 KGQQGGIGNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPGTDGLP 810
Query: 519 XAQGFTGLVGQIGPQGEPG 575
A G G+ G GP+GEPG
Sbjct: 811 GAPGRDGIDGVRGPKGEPG 829
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAE 437
++G G PG+PG G+ G PG +G +
Sbjct: 794 KQGPPGDPGNPGTDGLPGAPGRDGID 819
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
++G G PG PG G++G PG +G
Sbjct: 1146 QRGLTGNPGLPGAQGLKGEPGRDG 1169
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P +G +G PG PGP G G+PG G
Sbjct: 548 PGKMGPQGFKGDPGPPGPPGEVGVPGAPG 576
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP G GL G +G
Sbjct: 700 GPSGEPGKPGPAGRAGLAGQDG 721
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG G PG GP G +G PG G
Sbjct: 1396 KGEPGLPGRDGPAGEKGSPGLSG 1418
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP G G PG +G
Sbjct: 1007 GPPGRPGLPGPVGKEGPPGEDG 1028
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
EKG G PG G TG +GL G G
Sbjct: 1032 EKGYAGLPGPRGETGEKGLDGPSG 1055
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP G RG G +G
Sbjct: 1055 GPPGTPGQPGPPGPRGPEGRQG 1076
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E+G GFPG G G++GL G G
Sbjct: 1226 ERGVNGFPGIKGIQGVQGLEGPPG 1249
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/74 (25%), Positives = 26/74 (35%)
Frame = +3
Query: 354 FAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGF 533
+ G++G G+ GP G G+PG G + A G
Sbjct: 636 YGPPGDKGLKGNTGPPGDEGVPGPIGPKGDKCEACPKPPPGPAGEPGSPGLPGEDGAIGS 695
Query: 534 TGLVGQIGPQGEPG 575
GL G G G+PG
Sbjct: 696 RGLPGPSGEPGKPG 709
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +3
Query: 363 KGNRGFPGSP---GPTGIRGLPGHEG 431
+G G PG P G G RGLPG +G
Sbjct: 917 RGRDGLPGEPGARGDIGSRGLPGEDG 942
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G PG PGP G G G G +G TG
Sbjct: 989 GQNGLPGIPGPKGDTGPVGPPGRPGLPGPVGKEGPPGEDGNIGEKGYAGLPGPRGETGEK 1048
Query: 546 GQIGPQGEPG 575
G GP G PG
Sbjct: 1049 GLDGPSGPPG 1058
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/71 (25%), Positives = 25/71 (35%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G G G TG+ G+PG +G + G G+
Sbjct: 1319 GRAGQAGPKGETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVD 1378
Query: 546 GQIGPQGEPGM 578
G GP+GE G+
Sbjct: 1379 GPTGPKGESGI 1389
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
EKG+ G G G G RGLPG G
Sbjct: 1410 EKGSPGLSGLRGDKGDRGLPGPSG 1433
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
P EKG G G G G GLPG +G E
Sbjct: 362 PGAPGEKGEPGKQGEKGEEGRPGLPGAQGIE 392
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG RG PG+ G G RG+ G+ G
Sbjct: 395 KGERGEPGNQGLKGDRGVDGNPG 417
Score = 28.3 bits (60), Expect(2) = 0.33
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G GFPG+ G GI G PG G
Sbjct: 524 QGPTGFPGTKGNQGIAGPPGQIG 546
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAE 437
+ G G PG GP G G PG +GA+
Sbjct: 862 DTGPSGEPGPAGPPGPLGTPGTQGAK 887
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +3
Query: 375 GFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLVGQI 554
G G PGP G+ G PG +G G G VG+
Sbjct: 962 GPTGPPGPPGLPGRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPGLPGPVGKE 1021
Query: 555 GPQGEPG 575
GP GE G
Sbjct: 1022 GPPGEDG 1028
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/71 (26%), Positives = 23/71 (32%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GP G G+ G G + AQG G
Sbjct: 1105 KGDPGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGE 1164
Query: 543 VGQIGPQGEPG 575
G+ G G PG
Sbjct: 1165 PGRDGQNGSPG 1175
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGH 425
EKG G PG G G+ G PG+
Sbjct: 1549 EKGATGLPGLTGSIGVPGPPGY 1570
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEG 431
+G G PGP G +G PG G
Sbjct: 269 KGVKGEPGPEGPQGPPGVRG 288
Score = 22.6 bits (46), Expect(2) = 0.33
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGM 578
QGF G G GP GE G+
Sbjct: 554 QGFKGDPGPPGPPGEVGV 571
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPG 575
G G G GP+G PG
Sbjct: 294 GLNGTQGLPGPKGPPG 309
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE---------XXXXXXXXXXXXXXXXXXXX 497
P +GN+G+ G+PG G+ GL G GA+
Sbjct: 18 PGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGD 77
Query: 498 XXXXXXXXAQGFTGLVGQIGPQGEPG 575
A G GL G+ GP+G+PG
Sbjct: 78 SGEKGYRGAPGRQGLQGKRGPEGDPG 103
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGL---PGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQG 530
E G G PG+ GP G +G PG G E A+G
Sbjct: 11 EPGRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGPKGAAGEDGAEG 70
Query: 531 FTGLVGQIGPQGEPG 575
GLVG G +G G
Sbjct: 71 AAGLVGDSGEKGYRG 85
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
+KG G PGSPGP G G G G
Sbjct: 113 DKGVDGPPGSPGPQGFNGARGPNG 136
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHE 428
G G G PGP G RG PG +
Sbjct: 145 GQDGRQGPPGPPGARGEPGQQ 165
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 291 KQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
K RTA + N G +P + KG+RG PG G G+RG PG +G
Sbjct: 237 KGRTAILP-NKAMIGA-IPPFYGPKGDRGVPGRQGMYGLRGPPGRKG 281
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +GFPG+PG G +G+PG G
Sbjct: 132 GLKGFPGTPGDQGRQGVPGKRG 153
Score = 31.9 bits (69), Expect(2) = 0.057
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KGN+GFPG G GI GL G G
Sbjct: 116 KGNQGFPGPMGLDGIPGLKGFPG 138
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G++G PG+PG G+ G PG G
Sbjct: 207 QGSKGTPGAPGDPGLYGPPGPPG 229
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 339 CVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
C + KG G PG PG G G PG +G
Sbjct: 202 CGMRFQGSKGTPGAPGDPGLYGPPGPPGKKG 232
Score = 21.8 bits (44), Expect(2) = 0.057
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPG 575
+GF G G G QG PG
Sbjct: 134 KGFPGTPGDQGRQGVPG 150
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/78 (28%), Positives = 28/78 (35%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
+ K +G RGF GS GP G +GL G G +
Sbjct: 266 IAKMEGPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASG 325
Query: 522 AQGFTGLVGQIGPQGEPG 575
A+G G+ G G QG G
Sbjct: 326 AKGEAGVKGDKGDQGVMG 343
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/78 (25%), Positives = 28/78 (35%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
+P ++G+RG PG+ GP G+ G PG G +
Sbjct: 119 IPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAG 178
Query: 522 AQGFTGLVGQIGPQGEPG 575
G G G IG G+ G
Sbjct: 179 PPGVRGQPGAIGSPGDAG 196
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Frame = +3
Query: 345 PKCFAEKGNRGF---PGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXX 515
P +KG++G PG+PG G+RG PG G
Sbjct: 384 PGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQGERGPRGE 443
Query: 516 XXAQGFTGLVGQIGPQGEPGM 578
QG G G+ G G PG+
Sbjct: 444 QGKQGEKGHAGEGGADGAPGI 464
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRG---LPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFT 536
G RG PG+ G G RG PG +GA A G
Sbjct: 406 GLRGAPGARGDYGERGEPGAPGRDGAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIP 465
Query: 537 GLVGQIGPQGEPG 575
G G +GP G PG
Sbjct: 466 GEQGPMGPVGAPG 478
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRG 413
GN G PGSPGP+G +G
Sbjct: 481 GNAGSPGSPGPSGPKG 496
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
KG +G G GP G G+PG GA+
Sbjct: 222 KGPQGSRGPVGPRGANGVPGSPGAD 246
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
+G G PGSPG G G G GA+
Sbjct: 234 RGANGVPGSPGADGDTGEAGEHGAD 258
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 375 GFPGSPGPTGIRGLPGHEG 431
G PG PG G RG PG +G
Sbjct: 118 GIPGLPGKRGDRGTPGAKG 136
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E+G G G+PGP G G PG G
Sbjct: 467 EQGPMGPVGAPGPVGNAGSPGSPG 490
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G G GSPG G G G +GAE A G G
Sbjct: 183 RGQPGAIGSPGDAGRAGPQGPQGAEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGS 242
Query: 543 VGQIGPQGEPG 575
G G GE G
Sbjct: 243 PGADGDTGEAG 253
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 29.1 bits (62), Expect(2) = 0.026
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 297 RTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
R+A V + + GC + G RG G PG G RG+ G EG
Sbjct: 45 RSARVPSSRSVVGCGGLRA-GGPGRRGPVGPPGVPGPRGMQGEEG 88
Score = 25.8 bits (54), Expect(2) = 0.026
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGMLVSRSRRLQWY*W*SW 626
QG G G GPQG+PG + + W S+
Sbjct: 84 QGEEGPAGNKGPQGDPGPAAMEGNKGELMSWDSY 117
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/72 (30%), Positives = 25/72 (34%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
+ G RG G PG G+RG PG+EGA G G
Sbjct: 157 QTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQG 216
Query: 540 LVGQIGPQGEPG 575
GQ G G PG
Sbjct: 217 SKGQAGIDGRPG 228
Score = 34.7 bits (76), Expect = 0.063
Identities = 23/81 (28%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPT---GIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXX 512
+P + GN G PG GP G +G PG +G
Sbjct: 418 MPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMG 477
Query: 513 XXXAQGFTGLVGQIGPQGEPG 575
QG TG G GP G+PG
Sbjct: 478 ERGPQGETGPTGLTGPTGKPG 498
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/72 (27%), Positives = 26/72 (36%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G RG PG+PG G RG G G+ G G
Sbjct: 179 EGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGA 238
Query: 543 VGQIGPQGEPGM 578
+G GP G+PG+
Sbjct: 239 MGGPGPAGQPGI 250
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/72 (26%), Positives = 25/72 (34%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
+ G++G G GP G RG G +GA+ G G
Sbjct: 595 KNGDQGASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQG 654
Query: 540 LVGQIGPQGEPG 575
+ G GP G PG
Sbjct: 655 MPGMSGPPGRPG 666
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG RG PG PG G +G PG G
Sbjct: 803 KGERGSPGEPGKAGKQGPPGPSG 825
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/72 (29%), Positives = 25/72 (34%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
+KG G PG G GIRG G G +G G
Sbjct: 235 DKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKIG 294
Query: 540 LVGQIGPQGEPG 575
VG +GP G+PG
Sbjct: 295 RVGPMGPIGDPG 306
Score = 31.5 bits (68), Expect = 0.59
Identities = 20/78 (25%), Positives = 26/78 (33%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 524
P +G RG G PG G G PG +G
Sbjct: 539 PGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGD 598
Query: 525 QGFTGLVGQIGPQGEPGM 578
QG +G G +GP+G G+
Sbjct: 599 QGASGPTGPVGPRGPGGI 616
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G++G G PGP G G+ G GA G G +
Sbjct: 234 GDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKI 293
Query: 546 GQIGPQGEPG 575
G++GP G G
Sbjct: 294 GRVGPMGPIG 303
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P ++G G G PGP G G PG++G
Sbjct: 18 PGDIGDQGPSGEAGKPGPLGYNGQPGNQG 46
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G G+PG G G+PG +G G G V
Sbjct: 684 GRNGVKGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAV 743
Query: 546 GQIGPQGEPG 575
G GP G+PG
Sbjct: 744 GLRGPTGQPG 753
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAE 437
G +G G+PGP G GLPG G++
Sbjct: 84 GIKGSNGAPGPRGSPGLPGPRGSD 107
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAE 437
G +G PG GP G G PG +GA+
Sbjct: 816 GKQGPPGPSGPLGANGEPGVQGAK 839
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/71 (28%), Positives = 26/71 (36%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G+ G PG G+RG PG +G + A G G
Sbjct: 34 GPLGYNGQPGNQGMRGDPGPQGDQ----GPQGPPGGSTQTAGGIKGPDPNDLAAGIKGSN 89
Query: 546 GQIGPQGEPGM 578
G GP+G PG+
Sbjct: 90 GAPGPRGSPGL 100
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/75 (29%), Positives = 25/75 (33%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G PG PG G G PG GAE +G GL
Sbjct: 126 GMVGRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLP 185
Query: 546 GQIGPQGEPGMLVSR 590
G G +G+ G SR
Sbjct: 186 GNPGLKGKRGATGSR 200
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/77 (25%), Positives = 24/77 (31%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 524
P E+G +G G G TG G PG G+ A
Sbjct: 473 PGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPGA 532
Query: 525 QGFTGLVGQIGPQGEPG 575
G G G G +GE G
Sbjct: 533 SGRRGAPGAKGSRGERG 549
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG G G PG G G PG G A G G
Sbjct: 689 KGTPGRDGEPGIPGPDGRPGERGPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRGP 748
Query: 543 VGQIGPQGEPGMLVS 587
GQ G G PG VS
Sbjct: 749 TGQPGENGLPGEPVS 763
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/73 (26%), Positives = 24/73 (32%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
E G G G PGP+G G G G + +G G
Sbjct: 811 EPGKAGKQGPPGPSGPLGANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRG 870
Query: 540 LVGQIGPQGEPGM 578
G+ G QG PG+
Sbjct: 871 PRGEKGEQGPPGV 883
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
+ GN+G G PGP G +G G G
Sbjct: 41 QPGNQGMRGDPGPQGDQGPQGPPG 64
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+GN+G G G G++G PG GA+ +G TGL
Sbjct: 318 QGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLKGAKGVRGATGL 377
Query: 543 VGQIGPQGEPG 575
G GP+G G
Sbjct: 378 RGPQGPRGFTG 388
Score = 34.3 bits (75), Expect = 0.083
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
++G RG+ G+ GP GIRGL G +G +G G
Sbjct: 116 KQGPRGWTGARGPKGIRGLRGLKGPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKG 175
Query: 540 LVGQIGPQGEPG 575
G GPQG+ G
Sbjct: 176 SRGLTGPQGKTG 187
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G RGF G PG TG RGL G GA G G
Sbjct: 195 RGYRGFTGKPGLTGPRGLKGARGA---TGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGA 251
Query: 543 VGQIGPQGEPGMLVSRSRR 599
G +GP+G G+ S+ R
Sbjct: 252 KGAMGPRGYRGLTGSKGAR 270
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/79 (30%), Positives = 31/79 (39%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
VP KG G G+ GP G+RGL G +G +
Sbjct: 290 VPGRPGSKGKTGARGATGPRGLRGLRGPQGNQ---GLRGLKGSRGVQGRPGKNGAKGRNG 346
Query: 522 AQGFTGLVGQIGPQGEPGM 578
A G TG G+IGP+G G+
Sbjct: 347 APGRTGARGKIGPRGFTGL 365
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/78 (26%), Positives = 27/78 (34%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
VP + G G PG GP G++GL G GA
Sbjct: 395 VPGRTGKTGANGKPGLRGPQGLKGLKGKTGATGPRGLRGLKGSRGWTGPRGKTGATGPQG 454
Query: 522 AQGFTGLVGQIGPQGEPG 575
+G+ G G G QG+ G
Sbjct: 455 LRGYRGYTGARGLQGKTG 472
Score = 31.5 bits (68), Expect = 0.59
Identities = 20/71 (28%), Positives = 26/71 (36%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G RG G GP G +GL G +G+ +GFTGL
Sbjct: 307 GPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPGRTGARGKIGPRGFTGLK 366
Query: 546 GQIGPQGEPGM 578
G G +G G+
Sbjct: 367 GAKGVRGATGL 377
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/71 (26%), Positives = 23/71 (32%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G G G G TG+RG+PG G A+G G
Sbjct: 216 RGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGARGK 275
Query: 543 VGQIGPQGEPG 575
G G G PG
Sbjct: 276 QGLRGATGRPG 286
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/79 (27%), Positives = 28/79 (35%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
++G RG G PG G+ G PG +G QG G
Sbjct: 275 KQGLRGATGRPGRNGVPGRPGSKG---------KTGARGATGPRGLRGLRGPQGNQGLRG 325
Query: 540 LVGQIGPQGEPGMLVSRSR 596
L G G QG PG ++ R
Sbjct: 326 LKGSRGVQGRPGKNGAKGR 344
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGA 434
+ G G G+ GP G RGL G +GA
Sbjct: 245 KNGRPGAKGAMGPRGYRGLTGSKGA 269
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G +G G G G+RG+PG G +G G
Sbjct: 378 RGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGPQGLKGLKGKTGATGPRGLRGLKGS 437
Query: 543 VGQIGPQGEPG 575
G GP+G+ G
Sbjct: 438 RGWTGPRGKTG 448
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/82 (28%), Positives = 27/82 (32%)
Frame = +3
Query: 330 TGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXX 509
TG F +GN G GS G +G +G PG G
Sbjct: 228 TGATFIMAFVFQGNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPAGKRGMIGDRGVRGAE 287
Query: 510 XXXXAQGFTGLVGQIGPQGEPG 575
G GL+G GP GE G
Sbjct: 288 GNKGESGAPGLIGAEGPVGEEG 309
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E+G RG PG PG G GLPG G
Sbjct: 307 EEGGRGRPGKPGADGPEGLPGPAG 330
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP GI+G PG G
Sbjct: 52 GPPGAPGQPGPRGIKGPPGRAG 73
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/70 (27%), Positives = 21/70 (30%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G G PGP G G PG G + + G G V
Sbjct: 43 GRGGSQGPPGPPGAPGQPGPRGIKGPPGRAGGTGLMGYLGEPGVVGGAGPKGSSGRPGDV 102
Query: 546 GQIGPQGEPG 575
GQ G G G
Sbjct: 103 GQAGASGPKG 112
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +G PG PGPTG RG PG G
Sbjct: 243 GPKGTPGDPGPTGSRGRPGKPG 264
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG++G PG G TG+ G PG G
Sbjct: 173 KGDKGDPGKQGLTGLTGAPGSPG 195
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/80 (27%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHE---GAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGF 533
KG+RG G G TG+ G G + G QG
Sbjct: 125 KGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIPGMKGDKGDPGKQGL 184
Query: 534 TGLVGQIGPQGEPGMLVSRS 593
TGL G G G PG +++S
Sbjct: 185 TGLTGAPGSPGLPGNCINKS 204
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 34.7 bits (76), Expect = 0.063
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGA 434
++G RG PGSPGP G G G GA
Sbjct: 151 QRGRRGNPGSPGPKGTPGKDGRRGA 175
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 279 DPITKQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
+ I K + AV R C P +G G PG PG G RG G G
Sbjct: 105 EEIAKHLSPAVIRLCMGGSLTCPP--GPRGPPGRPGHPGQKGTRGRRGQRG 153
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G RG G+PG G +G PG +G
Sbjct: 149 RGQRGRRGNPGSPGPKGTPGKDG 171
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 34.7 bits (76), Expect = 0.063
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E+G+ G PG PG G +GLPG +G
Sbjct: 1136 EQGSYGLPGKPGSPGTKGLPGPKG 1159
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAE 437
++G RG PG GP G++G+ G +G +
Sbjct: 66 KRGRRGKPGPEGPAGVQGMEGRQGVQ 91
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
+P +G RG G PGP G G+ G EG +
Sbjct: 57 LPGKLGHQGKRGRRGKPGPEGPAGVQGMEGRQGVQGKDGEEGPPGPNGAPGRPGVRGPKG 116
Query: 522 AQGFTGLVGQIGPQGEPG 575
G GL G G QGE G
Sbjct: 117 ESGSRGLPGNHGVQGERG 134
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G RG PG PG G RG PG +G
Sbjct: 221 GMRGLPGPPGRRGKRGDPGSDG 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
GN G G G G RG+ G G E G G+
Sbjct: 125 GNHGVQGERGSQGGRGIKGGRGNEGSAGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQ 184
Query: 546 GQIGPQGEPGMLVSRSR 596
G GP G GM R +
Sbjct: 185 GSEGPYGPQGMTGDRGK 201
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P + G +G G G G+RGLPG G
Sbjct: 202 PGLVGDPGKKGMAGRAGAMGMRGLPGPPG 230
Score = 29.1 bits (62), Expect(2) = 0.091
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 357 AEKGNRGFPGSPGPTGIRGLPGHEG 431
A G+RG G PG G +G+PG +G
Sbjct: 404 AAMGSRGRTGYPGRNGRQGMPGADG 428
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E G+RG PG+ G G RG G G
Sbjct: 117 ESGSRGLPGNHGVQGERGSQGGRG 140
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G+ G PGS G G+RG G EG
Sbjct: 428 GDDGVPGSAGLMGVRGPVGPEG 449
Score = 23.8 bits (49), Expect(2) = 0.091
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGML 581
G G+ G +GP+G PG +
Sbjct: 437 GLMGVRGPVGPEGLPGAI 454
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P E G G PG GPTG+ GLPG +G
Sbjct: 226 PGLVGEPGPEGEPGPVGPTGVPGLPGVKG 254
Score = 34.3 bits (75), Expect = 0.083
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G +G G PGP G+ G PG EG QG TG
Sbjct: 215 GAKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGER 274
Query: 546 GQIGPQGEPG 575
G +G G PG
Sbjct: 275 GPVGEAGRPG 284
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Frame = +3
Query: 321 CTATGC---CVPKC---FAEKGNRGFPGSPGPTGIRGLPGHEG 431
C GC CVP RG PG PGP G +G PG +G
Sbjct: 78 CCKDGCDFRCVPPIPPPTPPPQRRGPPGDPGPKGNKGQPGAQG 120
Score = 30.3 bits (65), Expect(2) = 0.34
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E G RG PG PG G +G G G
Sbjct: 201 EPGERGEPGEPGAAGAKGAKGQPG 224
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P + + G G PG GP G +G PG EG
Sbjct: 943 PGKYGDDGLEGSPGPRGPIGPQGDPGPEG 971
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
EKG +G G GP G G PG G
Sbjct: 264 EKGEQGKTGERGPVGEAGRPGQNG 287
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
+ G +G PG+PG G RG G +G
Sbjct: 115 QPGAQGRPGAPGDRGERGSAGSDG 138
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E+G G PG+ G G +G PG G
Sbjct: 204 ERGEPGEPGAAGAKGAKGQPGPPG 227
Score = 25.4 bits (53), Expect(2) = 0.96
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPG 575
+G G G IGPQG+PG
Sbjct: 952 EGSPGPRGPIGPQGDPG 968
Score = 23.8 bits (49), Expect(2) = 0.96
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEGAE 437
R PG PG TG G G +G E
Sbjct: 931 REHPGDPGYTGKPGKYGDDGLE 952
Score = 20.6 bits (41), Expect(2) = 0.34
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGM 578
G G G +GP G PG+
Sbjct: 233 GPEGEPGPVGPTGVPGL 249
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +GFPG+PG G +G+PG G
Sbjct: 31 GLKGFPGTPGDQGRQGVPGKRG 52
Score = 31.9 bits (69), Expect(2) = 0.065
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KGN+GFPG G GI GL G G
Sbjct: 15 KGNQGFPGPMGLDGIPGLKGFPG 37
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGA 434
++G +G PG G G +G G +GA
Sbjct: 41 DQGRQGVPGKRGDDGAKGREGEDGA 65
Score = 21.8 bits (44), Expect(2) = 0.065
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPG 575
+GF G G G QG PG
Sbjct: 33 KGFPGTPGDQGRQGVPG 49
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 524
P F G G PG PG G G PG GA+
Sbjct: 940 PGPFGAAGLDGMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGI 999
Query: 525 QGFTGLVGQIGPQGEPG 575
GF GL G G G G
Sbjct: 1000 PGFPGLTGSSGRDGLDG 1016
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = +3
Query: 360 EKGNRGFPGSPGP------TGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
+ G RG PG PGP G+ G+PG GA+
Sbjct: 927 DAGPRGPPGEPGPPGPFGAAGLDGMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAGETG 986
Query: 522 AQGFTGLVGQIGPQGEPGMLVSRSR 596
A GF G G G G PG+ S R
Sbjct: 987 AIGFKGEPGTPGIPGFPGLTGSSGR 1011
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
E+G+ G PG G G RG PG EG+ ++G TG
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTG 75
Query: 540 LVGQIGPQGEPG 575
+G G +G PG
Sbjct: 76 DLGPPGAKGLPG 87
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E G+ G PG PG +G GLPG G
Sbjct: 874 EAGSDGRPGFPGESGANGLPGPPG 897
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E G RG PG PG G+RG G G
Sbjct: 233 ETGPRGRPGEPGADGVRGPDGSTG 256
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G+RG G GP G +GLPG + A G G
Sbjct: 69 GSRGDTGDLGPPGAKGLPGAQ-QYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDT 127
Query: 546 GQIGPQGEPG 575
G +GP+G+PG
Sbjct: 128 GPLGPKGQPG 137
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 342 VPKCFAEKGNRGF--PGSPGPTGIRGLPGHEG 431
+P +KG G PG PG G GLPG +G
Sbjct: 496 IPGFPGQKGEPGISRPGPPGENGAFGLPGRKG 527
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAE 437
G+ G G PGP G G PG G E
Sbjct: 306 GDLGPDGPPGPKGAPGAPGFSGIE 329
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG RG G+PGP G G G G
Sbjct: 473 KGLRGMTGNPGPNGPAGATGPPG 495
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGH 425
GN G G GP GI+G PG+
Sbjct: 629 GNNGPQGEGGPNGIKGKPGN 648
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAE 437
G G GSPGP G G PG G +
Sbjct: 894 GPPGLAGSPGPRGPNGEPGDPGMD 917
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
EKG G PG PG G G G +G
Sbjct: 379 EKGQSGEPGFPGEIGEAGTQGEKG 402
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 354 FAEKGNRGFPGSPGPTGIRGLPGHEG 431
F G +G G GP G GLPG +G
Sbjct: 520 FGLPGRKGDSGDRGPDGNPGLPGQKG 545
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +3
Query: 333 GCCVPKCFAEKGNRGFPGSP-----GPTGIRGLPGHEGAE 437
G +P + G GFPG P G G GLPG GA+
Sbjct: 577 GDAIPGNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGAD 616
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 363 KGNRGFPGS--PGPTGIRGLPGHEG 431
KG G PG PGP G+ G PG +G
Sbjct: 133 KGQPGSPGIDIPGPKGMDGPPGEKG 157
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
GN+G G PG G+ G PG G
Sbjct: 1429 GNKGKEGLPGDDGVPGQPGPPG 1450
Score = 24.6 bits (51), Expect(2) = 3.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGMLVSR 590
G GL GQ G G PGM+ R
Sbjct: 605 GRPGLPGQTGADGPPGMIGPR 625
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
+KG++G G GP G RG G +G
Sbjct: 543 QKGDKGLLGPIGPPG-RGGVGSQG 565
>SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)
Length = 767
Score = 29.5 bits (63), Expect(2) = 0.12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 384 GSPGPTGIRGLPGHEGA 434
GSPGP G RGL G+ GA
Sbjct: 230 GSPGPRGPRGLRGYRGA 246
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPG 422
+G RG+ G+ G TG RGLPG
Sbjct: 238 RGLRGYRGARGHTGPRGLPG 257
Score = 23.0 bits (47), Expect(2) = 0.12
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGMLVSRSRRLQW 608
+G+ G G GP+G PG + +W
Sbjct: 241 RGYRGARGHTGPRGLPGTSAVMMKDGRW 268
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
+G +G+ G+PGP G G PG +G E
Sbjct: 21 RGPQGYQGAPGPKGTGGFPGEKGDE 45
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG+RG G GP G +G PG +G
Sbjct: 12 KGDRGPIGPRGPQGYQGAPGPKG 34
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 375 GFPGSPGPTGIRGLPGHEGA 434
G PG PGP G RG+PG GA
Sbjct: 505 GLPGPPGPAGPRGIPGLPGA 524
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
++G+ G PG+PGP G+ GL G +G
Sbjct: 159 KEGSPGPPGAPGPPGVNGLQGLQG 182
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G G PG G G+PG +G G GL+
Sbjct: 134 GRNGLDGRPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPGVNGLQGLQGERGPIGPKGLM 193
Query: 546 GQIGPQGEPG 575
G G QG PG
Sbjct: 194 GDKGVQGLPG 203
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAE 437
E G +G PG GPTG +G G EG +
Sbjct: 121 EPGPQGPPGPQGPTGAKGDQGPEGIQ 146
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 351 CFAEKGNRGFPGSPGPTGIRGLPGHEG 431
C + +G RG PG GP G +G G +G
Sbjct: 112 CKSRRGKRGEPGPQGPPGPQGPTGAKG 138
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 348 KCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
+C K RG G PGP G G G GA+
Sbjct: 108 ECITCKSRRGKRGEPGPQGPPGPQGPTGAK 137
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
KG++G G GP GIRG G +G +
Sbjct: 137 KGDQGPEGIQGPQGIRGPEGPQGPQ 161
Score = 27.5 bits (58), Expect(2) = 0.28
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEGAE 437
RG G GP G RGL G +G +
Sbjct: 379 RGSKGPQGPNGTRGLQGEKGPQ 400
Score = 23.8 bits (49), Expect(2) = 0.28
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPG 575
QG G G GP+GEPG
Sbjct: 394 QGEKGPQGDQGPKGEPG 410
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
V K G RG+ GS GP G+ G GH G +
Sbjct: 414 VSKMEGPMGPRGYNGSIGPQGLAGAEGHNGTQ 445
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
++G+ G PG PGP G+RG G G
Sbjct: 260 DRGDMGPPGHPGPPGVRGRRGKRG 283
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 273 VYDPITKQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGA 434
+Y+ + K +++ N T + VP C +G +G PG G G GLPG +GA
Sbjct: 98 IYERL-KALESSISENITISRP-VPLC--PQGPQGLPGRDGLPGKAGLPGRDGA 147
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 25.8 bits (54), Expect(2) = 0.37
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPG 575
QG G+ G +GP+GE G
Sbjct: 142 QGIPGVKGDVGPKGEKG 158
Score = 25.0 bits (52), Expect(2) = 0.37
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 384 GSPGPTGIRGLPGHEG 431
GS GP G RG PG +G
Sbjct: 125 GSQGPPGKRGPPGEKG 140
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
++G RG PG PG G G PG G
Sbjct: 168 KRGRRGHPGEPGRNGTHGSPGWRG 191
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP G G PG G
Sbjct: 128 GKNGIPGHPGPPGPSGPPGRNG 149
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPT------GIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXX 503
+P + G G PG PGP+ G+ G+PG G +
Sbjct: 123 IPGTHGKNGIPGHPGPPGPSGPPGRNGLNGIPGVSGKQGPPGPPGKRGRRGHPGEPGRNG 182
Query: 504 XXXXXXAQGFTGLVGQIGPQGEPG 575
+G TG G +GP G PG
Sbjct: 183 THGSPGWRGKTGPRGPMGPIGPPG 206
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
E+G+ G PG G G RG PG EG+ ++G TG
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPGSRGDTG 75
Query: 540 LVGQIGPQGEPG 575
+G G +G PG
Sbjct: 76 DLGPPGAKGLPG 87
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
E G RG PG PG G+RG G G
Sbjct: 233 ETGPRGRPGEPGADGVRGPDGSTG 256
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G+RG G GP G +GLPG + A G G
Sbjct: 69 GSRGDTGDLGPPGAKGLPGAQ-QYGLPGPLGEAGPPGSQGSPGAPGIIGMNGAMGKKGDT 127
Query: 546 GQIGPQGEPG 575
G +GP+G+PG
Sbjct: 128 GPLGPKGQPG 137
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 363 KGNRGFPGS--PGPTGIRGLPGHEG 431
KG G PG PGP G+ G PG +G
Sbjct: 133 KGQPGSPGIDIPGPKGMDGPPGEKG 157
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 309 VDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
V R A+G P+ + G+RG PG GP G +G PG +G +
Sbjct: 195 VQRLSQASGSTGPRGY--NGSRGPPGPSGPQGQQGPPGTKGPQ 235
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G +G PG+ GP G G GH G
Sbjct: 223 QGQQGPPGTKGPQGFMGPRGHNG 245
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPG 422
G RG PG+ GP GI+G PG
Sbjct: 500 GPRGLPGAQGPQGIQGTPG 518
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
KG+RG G PGP G+ G G +G +
Sbjct: 490 KGDRGPAGPPGPRGLPGAQGPQGIQ 514
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGH 425
KG G PG PGP G +G PG+
Sbjct: 63 KGPPGLPGPPGPPGFQGPPGN 83
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G++G G PGP GI G PG G
Sbjct: 766 GSQGPNGQPGPPGINGPPGQVG 787
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G++G G PGP GI G PG G
Sbjct: 851 GSQGPNGQPGPPGINGPPGQVG 872
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP G+ G PG G
Sbjct: 86 GAIGPPGLPGPNGVNGPPGELG 107
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G GFPG GP G +G PG G
Sbjct: 49 GPPGFPGPQGPNGPKGPPGLPG 70
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAE 437
G G PG PG G GLPG +G +
Sbjct: 183 GPLGPPGPPGDMGPPGLPGPQGPQ 206
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +G G PGP G+ G PG G
Sbjct: 596 GPQGPNGQPGPPGVNGPPGEIG 617
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +G G PGP GI G PG G
Sbjct: 681 GVQGPNGQPGPPGINGPPGQIG 702
Score = 27.1 bits (57), Expect(2) = 0.45
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 381 PGSPGPTGIRGLPGHEG 431
PG PGP G G PG +G
Sbjct: 42 PGPPGPDGPPGFPGPQG 58
Score = 27.1 bits (57), Expect(2) = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +G G PGP GI G PG G
Sbjct: 341 GPQGPNGQPGPPGINGPPGPLG 362
Score = 27.1 bits (57), Expect(2) = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +G G PGP GI G PG G
Sbjct: 426 GPQGPNGQPGPPGINGPPGPLG 447
Score = 27.1 bits (57), Expect(2) = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G +G G PGP GI G PG G
Sbjct: 511 GPQGPNGQPGPPGINGPPGPLG 532
Score = 23.4 bits (48), Expect(2) = 0.45
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGM 578
GF G G GP+G PG+
Sbjct: 52 GFPGPQGPNGPKGPPGL 68
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPG 575
G GL G GP+G PG
Sbjct: 380 GPPGLPGAPGPKGPPG 395
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGM 578
G GL G GP G PG+
Sbjct: 465 GPPGLPGAPGPNGPPGI 481
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGM 578
G GL G GP G PG+
Sbjct: 550 GPPGLPGAPGPNGPPGI 566
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 28.3 bits (60), Expect(2) = 0.51
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 366 GNRGFPGSP----GPTGIRGLPGHEGAE 437
G RG PG P GP G GLPG++G E
Sbjct: 11 GIRGDPGIPSVVRGPPGKPGLPGNKGKE 38
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
GN+G G PG G+ G PG G
Sbjct: 33 GNKGKEGLPGDDGVPGQPGPPG 54
Score = 22.2 bits (45), Expect(2) = 0.51
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPG 575
G G+ GQ GP G PG
Sbjct: 42 GDDGVPGQPGPPGPPG 57
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
+ K +G RGF GS GP G +GL G G
Sbjct: 676 IAKMEGPQGPRGFNGSEGPVGPKGLKGDPG 705
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
P PV P P P+ P GP GP +P+ P
Sbjct: 1120 PVGPVGPVGPVGPVGPVGPVGPVDPVGP 1147
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
P +PV P P P+ P GP GP P+ P
Sbjct: 1141 PVDPVGPVGPVGPVGPVGPVGPVGPVGP 1168
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P EKGNRG G GP G G PG +G
Sbjct: 31 PGSKGEKGNRGRRGRRGPRGPPGKPGADG 59
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G G PG+ G GIRG PG +G
Sbjct: 49 RGPPGKPGADGKPGIRGPPGPKG 71
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPG 422
KG++G G GP G++G PG
Sbjct: 70 KGDKGEKGDAGPRGLKGDPG 89
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.3 bits (60), Expect(2) = 0.60
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 303 AAVDRN--CTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
+ +DRN +P +G +G G PGP G +G G +G +
Sbjct: 447 SVLDRNPYMAVNNSRIPGPRGPQGEQGLKGDPGPQGQQGPKGDQGEQ 493
Score = 21.8 bits (44), Expect(2) = 0.60
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 522 AQGFTGLVGQIGPQGEPG 575
+QG G +G +GP+G G
Sbjct: 498 SQGPQGPIGALGPRGPKG 515
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/71 (26%), Positives = 24/71 (33%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GPTG +G G G +G TG
Sbjct: 30 KGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPKGDTGATGPTGPKGDTGA 89
Query: 543 VGQIGPQGEPG 575
G GP+G+ G
Sbjct: 90 TGPNGPKGDTG 100
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/71 (25%), Positives = 23/71 (32%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GP G G G G + +G TG
Sbjct: 6 KGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDTGA 65
Query: 543 VGQIGPQGEPG 575
G GP+G+ G
Sbjct: 66 TGPTGPKGDTG 76
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GPTG G G GA A G G
Sbjct: 240 KGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGP 299
Query: 543 VGQIGPQGEPG 575
G GP+G+ G
Sbjct: 300 TGPTGPKGDTG 310
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/71 (26%), Positives = 21/71 (29%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GPTG G G G +G TG
Sbjct: 96 KGDTGATGPAGPTGPTGPKGDTGPTDPTGPNGDTGATGPTGPKGDTGATGPTGPKGDTGA 155
Query: 543 VGQIGPQGEPG 575
G GP G G
Sbjct: 156 TGPTGPTGPKG 166
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/71 (25%), Positives = 22/71 (30%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GP G G G G +G TG
Sbjct: 84 KGDTGATGPNGPKGDTGATGPAGPTGPTGPKGDTGPTDPTGPNGDTGATGPTGPKGDTGA 143
Query: 543 VGQIGPQGEPG 575
G GP+G+ G
Sbjct: 144 TGPTGPKGDTG 154
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/72 (27%), Positives = 26/72 (36%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
+ G+ G GSPGP G G G +G + +G TG
Sbjct: 63 DSGSPGAVGSPGPMGPEGPKGDKGDKGDTGAPGIDGQPGPQGEKGETGPQGEQGPKGDTG 122
Query: 540 LVGQIGPQGEPG 575
GQ GP+G G
Sbjct: 123 PQGQPGPEGPQG 134
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
KG+ G G PGP G +G G GA+
Sbjct: 118 KGDTGPQGQPGPEGPQGPAGPSGAD 142
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 25.8 bits (54), Expect(2) = 0.99
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGMLV 584
+G+ G G+ GP+GEPG V
Sbjct: 481 RGYRGPKGEPGPKGEPGYKV 500
Score = 23.4 bits (48), Expect(2) = 0.99
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 384 GSPGPTGIRGLPGHEG 431
GS GP G+RG G +G
Sbjct: 473 GSKGPDGLRGYRGPKG 488
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P P AP P +P P GP +P P
Sbjct: 259 PTGPSDPTAPSDPTAPSDPTGPSDPTVP 286
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P P AP P P P GP +P P
Sbjct: 427 PTGPSDPTAPSDPTVPSDPTGPSDPTAP 454
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P P P P +P P GP +P P
Sbjct: 172 PTGPSDPTGPSDPTAPSDPTGPSDPTAP 199
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P P P P +P P GP +P P
Sbjct: 217 PTGPSDPTGPSDPTAPSDPTGPSDPTAP 244
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P P P P P P GP +P P
Sbjct: 205 PTGPSDPTGPSDPTGPSDPTGPSDPTAP 232
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P AP P +P P GP +P P
Sbjct: 127 PTGQSDPTAPSDPTAPSDPTGPSDPTAP 154
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 547 PTNPVKP*APGLPLSPFGPRGP*EPICP 464
PT P P P P P P GP +P P
Sbjct: 199 PTGPSDPTGPSDPTGPSDPTGPSDPTGP 226
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GPTG G G GA A G G
Sbjct: 21 KGDTGATGPTGPTGPTGPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAGP 80
Query: 543 VGQIGPQGEPG 575
G GP+G+ G
Sbjct: 81 TGPTGPKGDTG 91
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P E G G PG+PGP G G PG G
Sbjct: 108 PGHVGEDGAPGAPGAPGPPGSPGAPGLPG 136
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAE 437
EKG+ G G+PG G+ G PG G +
Sbjct: 137 EKGDPGLQGAPGAAGLPGAPGLPGPQ 162
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G PG PG G G PG GA G GL
Sbjct: 100 GMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLP 159
Query: 546 GQIGPQGEPG 575
G GP G PG
Sbjct: 160 GPQGPMGPPG 169
>SB_1632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 700
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 272 CIRPHYETTHCCCGSQLHSDWLLCAKMFRRK 364
CI P Y+ THC C S LC K F+ +
Sbjct: 357 CIYPTYDFTHCLCDSIEDITHSLCTKEFQSR 387
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 330 TGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
TG PK KG+ G G G G+RG G +GA+
Sbjct: 256 TGITGPK--GPKGDTGNKGDQGVQGLRGYNGTQGAK 289
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 330 TGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
TG PK KG+ G G G G+RG G +G
Sbjct: 208 TGIMGPK--GPKGDTGNKGDQGVQGLRGYNGTQG 239
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGM 578
+G TG++G GP+G+ G+
Sbjct: 241 RGNTGIMGPQGPKGDTGI 258
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G +GF G PGP G+ G G +G
Sbjct: 51 QGRKGFKGEPGPPGLPGEQGPQG 73
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 525 QGFTGLVGQIGPQGEPGMLVSR 590
QG TG+ G++G +GE G+ +R
Sbjct: 6 QGATGITGEVGKEGEQGVKGAR 27
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPG 422
EKG+RG PG GP G G PG
Sbjct: 14 EKGSRGPPGPAGPIGNPGKPG 34
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGA 434
G +G PG PG G +G+PG+ GA
Sbjct: 1689 GPKGPPGPPGLPGPQGIPGYPGA 1711
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPG 422
KG G PG PGP GI G PG
Sbjct: 1691 KGPPGPPGLPGPQGIPGYPG 1710
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 381 PGSPGPTGIRGLPGHEGAE 437
PG PGP G GLPG +G +
Sbjct: 1670 PGPPGPDGPMGLPGPQGPD 1688
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/71 (25%), Positives = 23/71 (32%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGLV 545
G G G PGP+G +G PG G+ A + G
Sbjct: 1717 GRDGPMGPPGPSGGQGPPGDMGSMGPMGMGGEHKDFKRSASAQVGQYGYPSQAASYIGTQ 1776
Query: 546 GQIGPQGEPGM 578
G G G PG+
Sbjct: 1777 GASGVDGPPGL 1787
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KG G PG PGP G G G+ G
Sbjct: 1837 KGWPGVPGPPGPPGAYGWKGYPG 1859
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 345 PKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
P +G +G PG PGP G G G +G
Sbjct: 1785 PGLAGPQGPKGMPGPPGPPGPPGAIGWKG 1813
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 345 PKCFAEKGNRGFP-GSPGPTGIRGLPGHEGAE 437
P + KG G P G PG GI G PG +G +
Sbjct: 1849 PGAYGWKGYPGNPAGPPGRDGIPGPPGRQGGK 1880
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G PG PGP G +G PG G
Sbjct: 1823 GLDGPPGPPGPQGPKGWPGVPG 1844
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G +G+PG PGP G G G +G
Sbjct: 1834 QGPKGWPGVPGPPGPPGAYGWKG 1856
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHE 428
KG RG PG+PG G+RG G +
Sbjct: 245 KGERGPPGAPGAAGVRGDRGDD 266
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
+G +G PGS G +G++G PG G QG G+
Sbjct: 53 QGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGY-QGMPGI 111
Query: 543 VGQIGPQGEPG 575
G GP+G PG
Sbjct: 112 AGAPGPRGPPG 122
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEG 431
RG G PGP G +G PG +G
Sbjct: 44 RGTEGPPGPQGTKGPPGSQG 63
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 192 DINTYGLSGRIDVXXXXXXXSSGLNFAV---YDPITKQRTAAVDRNCTATG-CCVPKCFA 359
DIN G++ RI + G+ A Y P T Q + +CT C P C
Sbjct: 705 DINVAGINCRIISHPPKIDTTGGMQMAQQLSYPPYTGQ-VPCLPSSCTPQNPCSPPGCTP 763
Query: 360 EKGNRGFPGSPG 395
+ G+P +PG
Sbjct: 764 QYSTSGYPQAPG 775
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 28.3 bits (60), Expect(2) = 1.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 336 CCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
CC G G PG PG G G PG G
Sbjct: 28 CCAQ---GHDGKNGIPGDPGVPGQLGTPGKSG 56
Score = 20.6 bits (41), Expect(2) = 1.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGMLVSR 590
G G G GP+G PG SR
Sbjct: 59 GRNGKPGAPGPKGPPGPKGSR 79
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 28.3 bits (60), Expect(2) = 1.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 336 CCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
CC + G G PG PG G G G++G
Sbjct: 28 CCAQGHDGKNGIPGIPGVPGKPGTPGKSGNDG 59
Score = 20.6 bits (41), Expect(2) = 1.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGMLVSR 590
G G G GP+G PG SR
Sbjct: 59 GRNGKPGAPGPKGPPGPKGSR 79
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +3
Query: 315 RNCTATGCCVP-KCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXX 491
+N TG CV + +G +G G GP G +G G G +
Sbjct: 194 QNILKTGVCVKNRKMCIQGPKGDRGRRGPRGRQGPQGKRGPKGHTVYRRTQGAVGQKGDR 253
Query: 492 XXXXXXXXXXAQGFTGLVGQIGPQGEPG 575
QG G G IGP+GEPG
Sbjct: 254 GERG------PQGPPGPKGPIGPKGEPG 275
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 26.6 bits (56), Expect(2) = 2.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 381 PGSPGPTGIRGLPGHEG 431
PG GP G +GLPG +G
Sbjct: 176 PGPQGPPGPQGLPGPQG 192
Score = 21.4 bits (43), Expect(2) = 2.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPG 575
G G G GPQG PG
Sbjct: 198 GDIGPSGSSGPQGPPG 213
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 26.2 bits (55), Expect(2) = 3.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEG 431
G G G PGP G G PG G
Sbjct: 20 GIDGRDGRPGPPGRHGFPGQRG 41
Score = 21.8 bits (44), Expect(2) = 3.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGML 581
G G+ G GP G PG++
Sbjct: 38 GQRGMPGGTGPPGPPGII 55
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 336 CCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEG 431
CC G G PG PG G G PG G
Sbjct: 28 CCAQ---GHDGKNGIPGIPGVHGKPGTPGKSG 56
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 528 GFTGLVGQIGPQGEPGMLVSR 590
G G G GP+G PG SR
Sbjct: 59 GRNGKPGAPGPKGPPGPKGSR 79
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 366 GNRGFPGSP---GPTGIRGLPGHEG 431
G GFPG+P GP G+ G+PG G
Sbjct: 265 GAPGFPGAPGFQGPPGLDGMPGAPG 289
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHEGA 434
G G PG+PG G +G PG GA
Sbjct: 280 GLDGMPGAPGMPGPQGYPGGSGA 302
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Frame = +3
Query: 363 KGNRGFPGSP------GPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 524
KG+ G PG P GP GI+G G+ G +
Sbjct: 166 KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRIGIKGEKGKTGRKGDSGM 225
Query: 525 QGFTGLVGQIGPQGEPG 575
+G G +GQ G +GE G
Sbjct: 226 KGDDGKIGQKGDRGERG 242
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/99 (24%), Positives = 31/99 (31%)
Frame = +3
Query: 282 PITKQRTAAVDRNCTATGCCVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXX 461
P+ + T+ + C V C G +G G PG G G G +GA
Sbjct: 483 PVLRSPTSLIGPPGPPGLCNVDVCKGTPGIQGPQGLPGKQGPAGPQGRQGASGPPGIPGL 542
Query: 462 XXXXXXXXXXXXXXXXXXXXAQGFTGLVGQIGPQGEPGM 578
G GL G GPQG G+
Sbjct: 543 NGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQGPMGV 581
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEG 431
RG PG PGP G +G PG G
Sbjct: 121 RGPPGPPGPQGPKGDPGVRG 140
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEG 431
RG PG PGP G +G PG G
Sbjct: 121 RGPPGPPGPQGPKGDPGVRG 140
>SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003)
Length = 157
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+GN G+ G PGP G++G G G
Sbjct: 6 QGNPGYQGVPGPRGMQGEEGPAG 28
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPG 422
G++G PG GP G+ G PG
Sbjct: 238 GSKGVPGPQGPQGLEGPPG 256
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
+G GF GS GP GI+G G G
Sbjct: 231 RGPHGFNGSRGPPGIQGPQGERG 253
>SB_902| Best HMM Match : Collagen (HMM E-Value=0.00027)
Length = 617
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/71 (25%), Positives = 21/71 (29%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTG 539
+ G+ G P PG TGI PG G G TG
Sbjct: 423 QAGDTGIPTQPGDTGIPTQPGDTGIPTQAGDTGIPTQAGDTGIPTQAGYTGIPTRAGDTG 482
Query: 540 LVGQIGPQGEP 572
+ Q G G P
Sbjct: 483 IPTQAGDTGIP 493
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
V K G RGF GS GP G +G+ G G +
Sbjct: 817 VSKMEGPMGPRGFNGSQGPKGDQGVQGPIGPQ 848
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAE 437
KG++G PG G G G PG GA+
Sbjct: 145 KGDKGRPGKRGRRGPAGPPGQPGAD 169
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPG 422
KG RG G GP G++G PG
Sbjct: 181 KGERGPKGDVGPRGLKGEPG 200
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 360 EKGNRGFPGSPGPTGIRGLPGHEG 431
++G G PG GP G G PG +G
Sbjct: 1044 DRGQTGVPGPVGPDGDIGAPGADG 1067
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGFTGL 542
KG+ G G GP G G+ G EG + +G TG+
Sbjct: 332 KGDTGITGPQGPKGDTGITGPEGPK------GDTGITGPEGPKGDTGITGPQGPKGDTGI 385
Query: 543 VGQIGPQGEPGM 578
G GP+G+ G+
Sbjct: 386 TGPQGPKGDTGI 397
>SB_1619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 626 PTSPSVPLQPSRPGYQHTRLTLRTYLP 546
P P VPL P PG QHT +L+ + P
Sbjct: 70 PLRPQVPLSPQLPG-QHTPRSLQKWSP 95
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 339 CVPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
CV +G RG+ G GP GI G G GA+
Sbjct: 171 CVQGPQGLRGPRGYSGDRGPQGIPGDMGPRGAK 203
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 524 STRLASVTFWPSRTLRTYLPLLSFGTLR 441
ST +AS TF P T +Y P S TLR
Sbjct: 89 STEVASSTFKPRTTSSSYYPPTSMATLR 116
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEG 431
KGNRG G PG GI G G +G
Sbjct: 68 KGNRGVQGIPGSHGIPGRIGIKG 90
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 372 RGFPGSPGPTGIRGLPGHEGAE 437
+G PG PGP GI G G G +
Sbjct: 44 KGDPGPPGPPGIMGRRGPRGIQ 65
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Frame = +3
Query: 363 KGNRGFPGSPGPTGIRGLPGHEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----QG 530
+G+ G G PGP G +G+ H QG
Sbjct: 57 RGSAGMKGEPGPAGEKGMQ-HRAPRCLPSFARFGTLPVCVEIAREKPQNSRNSVRYCQQG 115
Query: 531 FTGLVGQIGPQGEPGM 578
G+ G GP G+PGM
Sbjct: 116 EAGVQGPTGPAGDPGM 131
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 366 GNRGFPGSPGPTGIRGLPGHE 428
G G PG+PG G GL G E
Sbjct: 151 GGNGLPGNPGDPGRPGLKGEE 171
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 632 SAPTSPSVPLQPSRPGYQHTRLTLRT 555
S P++PS P PS P HT T T
Sbjct: 435 STPSTPSTPSTPSTPSLTHTPSTPST 460
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 632 SAPTSPSVPLQPSRPGYQHTRLTLRT 555
S P++PS P PS P HT T T
Sbjct: 659 STPSTPSTPSTPSTPSLTHTPSTPST 684
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 230 TSAQTAAQ*WPKFCCIRPHYETTHCCCGSQLHSDWLLCA 346
T+AQ A WP +R +Y H C G+ +H W++ A
Sbjct: 253 TTAQRGA--WPWQAMLR-YYNGNHFCGGTLVHPRWVVTA 288
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -1
Query: 200 VYVWSLWFRRLW---LFPCRRWPSS 135
++ WSLW R +W L+P WP S
Sbjct: 1645 LWPWSLWSRSMWPRSLWPRSLWPRS 1669
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 342 VPKCFAEKGNRGFPGSPGPTGIRGLPGHEGAE 437
V K G RG+ GS GP G +G+ G G +
Sbjct: 360 VSKVEGPMGPRGYNGSQGPKGDQGVQGPVGPQ 391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,828,261
Number of Sequences: 59808
Number of extensions: 403666
Number of successful extensions: 2625
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2358
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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