Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J11
(474 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95114-6|CAI17911.1| 193|Homo sapiens apolipoprotein L, 4 protein. 34 0.29
AY014915-1|AAG50353.1| 351|Homo sapiens apolipoprotein L-IV spl... 34 0.29
AY014914-1|AAG50352.1| 348|Homo sapiens apolipoprotein L-IV spl... 34 0.29
AY014913-2|AAG50351.1| 348|Homo sapiens apolipoprotein L-IV spl... 34 0.29
AY014913-1|AAG50350.1| 351|Homo sapiens apolipoprotein L-IV spl... 34 0.29
AF305226-1|AAK20212.1| 347|Homo sapiens apolipoprotein L4 protein. 34 0.29
CR456380-1|CAG30266.1| 348|Homo sapiens APOL4 protein. 32 0.88
CR457294-1|CAG33575.1| 493|Homo sapiens C14orf133 protein. 31 2.7
BC032551-1|AAH32551.1| 795|Homo sapiens phospholipase A2-activa... 31 2.7
BC015054-1|AAH15054.1| 493|Homo sapiens chromosome 14 open read... 31 2.7
AL356133-3|CAH72641.1| 738|Homo sapiens phospholipase A2-activa... 31 2.7
AK223544-1|BAD97264.1| 748|Homo sapiens Hypothetical protein DK... 31 2.7
AK222706-1|BAD96426.1| 493|Homo sapiens chromosome 14 open read... 31 2.7
AK022925-1|BAB14310.1| 493|Homo sapiens protein ( Homo sapiens ... 31 2.7
AK022769-1|BAB14237.1| 493|Homo sapiens protein ( Homo sapiens ... 31 2.7
AK001642-1|BAA91803.1| 795|Homo sapiens protein ( Homo sapiens ... 31 2.7
AJ238243-1|CAB42881.1| 738|Homo sapiens phospholipase A2 activa... 31 2.7
AF111168-2|AAD09624.1| 480|Homo sapiens unknown protein. 31 2.7
AF083395-1|AAD03030.1| 738|Homo sapiens phospholipase A2-activa... 31 2.7
U96781-2|AAB53112.1| 994|Homo sapiens Ca2+ ATPase of fast-twitc... 29 6.2
U96781-1|AAB53113.1| 1001|Homo sapiens Ca2+ ATPase of fast-twitc... 29 6.2
BX537784-1|CAD97841.1| 994|Homo sapiens hypothetical protein pr... 29 6.2
BC037354-1|AAH37354.1| 844|Homo sapiens Similar to ATPase, Ca++... 29 6.2
AY358195-1|AAQ88562.1| 200|Homo sapiens RGSF9380 protein. 29 8.2
AL592078-7|CAI16188.1| 200|Homo sapiens tudor domain containing... 29 8.2
AL592078-1|CAI16182.1| 252|Homo sapiens tudor domain containing... 29 8.2
AL162591-1|CAH72850.1| 252|Homo sapiens tudor domain containing... 29 8.2
>Z95114-6|CAI17911.1| 193|Homo sapiens apolipoprotein L, 4 protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES +++ + L N H+H+SLK+
Sbjct: 144 VLDVVNLVQDSLDLHKGAKSESAESLRQWAQELEENLNELTHIHQSLKA 192
>AY014915-1|AAG50353.1| 351|Homo sapiens apolipoprotein L-IV splice
variant b protein.
Length = 351
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES +++ + L N H+H+SLK+
Sbjct: 302 VLDVVNLVQDSLDLHKGAKSESAESLRQWAQELEENLNELTHIHQSLKA 350
>AY014914-1|AAG50352.1| 348|Homo sapiens apolipoprotein L-IV splice
variant a protein.
Length = 348
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES +++ + L N H+H+SLK+
Sbjct: 299 VLDVVNLVQDSLDLHKGAKSESAESLRQWAQELEENLNELTHIHQSLKA 347
>AY014913-2|AAG50351.1| 348|Homo sapiens apolipoprotein L-IV splice
variant a protein.
Length = 348
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES +++ + L N H+H+SLK+
Sbjct: 299 VLDVVNLVQDSLDLHKGAKSESAESLRQWAQELEENLNELTHIHQSLKA 347
>AY014913-1|AAG50350.1| 351|Homo sapiens apolipoprotein L-IV splice
variant b protein.
Length = 351
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES +++ + L N H+H+SLK+
Sbjct: 302 VLDVVNLVQDSLDLHKGAKSESAESLRQWAQELEENLNELTHIHQSLKA 350
>AF305226-1|AAK20212.1| 347|Homo sapiens apolipoprotein L4 protein.
Length = 347
Score = 33.9 bits (74), Expect = 0.29
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES +++ + L N H+H+SLK+
Sbjct: 298 VLDVVNLVQDSLDLHKGAKSESAESLRQWAQELEENLNELTHIHQSLKA 346
>CR456380-1|CAG30266.1| 348|Homo sapiens APOL4 protein.
Length = 348
Score = 32.3 bits (70), Expect = 0.88
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 301 VLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHVHRSLKS 447
VLD++ L Q DL K K ES + + + L N H+H+SLK+
Sbjct: 299 VLDVVNLVQDSLDLHKGEKSESAELLRQWAQELEENLNELTHIHQSLKA 347
>CR457294-1|CAG33575.1| 493|Homo sapiens C14orf133 protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 385 TLKRLILGRNCSLHVHRSLKSKTELLDGAV 474
T++RL G+ CSL RSL+ K +LL+ AV
Sbjct: 160 TVRRLRKGKVCSLERFRSLQDKLQLLEEAV 189
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 100 DDDDYWNTSETKDKAFNFDDD 162
D+++YWN+S K KAF FDD+
Sbjct: 7 DEEEYWNSS--KFKAFTFDDE 25
>BC032551-1|AAH32551.1| 795|Homo sapiens phospholipase
A2-activating protein protein.
Length = 795
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 139 KAFNFDDDLLSPQ-EILAIGKK------SFPGQNEGGVFSSANISAVKTAQLPLHSLVSS 297
KA N +D++ P +IL + K +F + EG FSS I+ + P + L++
Sbjct: 601 KAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLAL 660
Query: 298 KVLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHV 429
+ + Q+G+ L + ES + A+ LK G N ++H+
Sbjct: 661 RTFCNCFVGQAGQKLMMS-QRESLMSHAIELKS---GSNKNIHI 700
>BC015054-1|AAH15054.1| 493|Homo sapiens chromosome 14 open reading
frame 133 protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 385 TLKRLILGRNCSLHVHRSLKSKTELLDGAV 474
T++RL G+ CSL RSL+ K +LL+ AV
Sbjct: 160 TVRRLRKGKVCSLERFRSLQDKLQLLEEAV 189
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 100 DDDDYWNTSETKDKAFNFDDD 162
D+++YWN+S K KAF FDD+
Sbjct: 7 DEEEYWNSS--KFKAFTFDDE 25
>AL356133-3|CAH72641.1| 738|Homo sapiens phospholipase
A2-activating protein protein.
Length = 738
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 139 KAFNFDDDLLSPQ-EILAIGKK------SFPGQNEGGVFSSANISAVKTAQLPLHSLVSS 297
KA N +D++ P +IL + K +F + EG FSS I+ + P + L++
Sbjct: 544 KAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLAL 603
Query: 298 KVLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHV 429
+ + Q+G+ L + ES + A+ LK G N ++H+
Sbjct: 604 RTFCNCFVGQAGQKLMMS-QRESLMSHAIELKS---GSNKNIHI 643
>AK223544-1|BAD97264.1| 748|Homo sapiens Hypothetical protein
DKFZp434J1217 (PLAA protein) (OTTHUMP00000045176)
variant protein.
Length = 748
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 139 KAFNFDDDLLSPQ-EILAIGKK------SFPGQNEGGVFSSANISAVKTAQLPLHSLVSS 297
KA N +D++ P +IL + K +F + EG FSS I+ + P + L++
Sbjct: 554 KAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLAL 613
Query: 298 KVLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHV 429
+ + Q+G+ L + ES + A+ LK G N ++H+
Sbjct: 614 RTFCNCFVGQAGQKLMMS-QRESLMSHAIELKS---GSNKNIHI 653
>AK222706-1|BAD96426.1| 493|Homo sapiens chromosome 14 open reading
frame 133 variant protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 385 TLKRLILGRNCSLHVHRSLKSKTELLDGAV 474
T++RL G+ CSL RSL+ K +LL+ AV
Sbjct: 160 TVRRLRKGKVCSLERFRSLQDKLQLLEEAV 189
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 100 DDDDYWNTSETKDKAFNFDDD 162
D+++YWN+S K KAF FDD+
Sbjct: 7 DEEEYWNSS--KFKAFTFDDE 25
>AK022925-1|BAB14310.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ12863 fis, clone NT2RP2003581. ).
Length = 493
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 385 TLKRLILGRNCSLHVHRSLKSKTELLDGAV 474
T++RL G+ CSL RSL+ K +LL+ AV
Sbjct: 160 TVRRLRKGKVCSLERFRSLQDKLQLLEEAV 189
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 100 DDDDYWNTSETKDKAFNFDDD 162
D+++YWN+S K KAF FDD+
Sbjct: 7 DEEEYWNSS--KFKAFTFDDE 25
>AK022769-1|BAB14237.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ12707 fis, clone NT2RP1000916. ).
Length = 493
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 385 TLKRLILGRNCSLHVHRSLKSKTELLDGAV 474
T++RL G+ CSL RSL+ K +LL+ AV
Sbjct: 160 TVRRLRKGKVCSLERFRSLQDKLQLLEEAV 189
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 100 DDDDYWNTSETKDKAFNFDDD 162
D+++YWN+S K KAF FDD+
Sbjct: 7 DEEEYWNSS--KFKAFTFDDE 25
>AK001642-1|BAA91803.1| 795|Homo sapiens protein ( Homo sapiens
cDNA FLJ10780 fis, clone NT2RP4000376, highly similar to
Homo sapiens mRNA for phospholipase A2 activating
protein. ).
Length = 795
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 139 KAFNFDDDLLSPQ-EILAIGKK------SFPGQNEGGVFSSANISAVKTAQLPLHSLVSS 297
KA N +D++ P +IL + K +F + EG FSS I+ + P + L++
Sbjct: 601 KAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLAL 660
Query: 298 KVLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHV 429
+ + Q+G+ L + ES + A+ LK G N ++H+
Sbjct: 661 RTFCNCFVGQAGQKLMMS-QRESLMSHAIELKS---GSNKNIHI 700
>AJ238243-1|CAB42881.1| 738|Homo sapiens phospholipase A2
activating protein protein.
Length = 738
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 139 KAFNFDDDLLSPQ-EILAIGKK------SFPGQNEGGVFSSANISAVKTAQLPLHSLVSS 297
KA N +D++ P +IL + K +F + EG FSS I+ + P + L++
Sbjct: 544 KAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLAL 603
Query: 298 KVLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHV 429
+ + Q+G+ L + ES + A+ LK G N ++H+
Sbjct: 604 RTFCNCFVGQAGQKLMMS-QRESLMSHAIELKS---GSNKNIHI 643
>AF111168-2|AAD09624.1| 480|Homo sapiens unknown protein.
Length = 480
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 385 TLKRLILGRNCSLHVHRSLKSKTELLDGAV 474
T++RL G+ CSL RSL+ K +LL+ AV
Sbjct: 147 TVRRLRKGKVCSLERFRSLQDKLQLLEEAV 176
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 100 DDDDYWNTSETKDKAFNFDDD 162
D+++YWN+S K KAF FDD+
Sbjct: 7 DEEEYWNSS--KFKAFTFDDE 25
>AF083395-1|AAD03030.1| 738|Homo sapiens phospholipase
A2-activating protein protein.
Length = 738
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 139 KAFNFDDDLLSPQ-EILAIGKK------SFPGQNEGGVFSSANISAVKTAQLPLHSLVSS 297
KA N +D++ P +IL + K +F + EG FSS I+ + P + L++
Sbjct: 544 KAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLAL 603
Query: 298 KVLDLILLAQSGKDLSKEIKHESTDTVAVTLKRLILGRNCSLHV 429
+ + Q+G+ L + ES + A+ LK G N ++H+
Sbjct: 604 RTFCNCFVGQAGQKLMMS-QRESLMSHAIELKS---GSNKNIHI 643
>U96781-2|AAB53112.1| 994|Homo sapiens Ca2+ ATPase of fast-twitch
skeletal muscle sacroplasmic reticulum, neonatal iso
protein.
Length = 994
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 AIGKKSFPGQNEGGVFSSANISAVKTAQLPLHSLVSSKVLDLILLAQSGKDLSKEIKHES 366
A+G K F GV N V T ++PL V K++ +I +G+D + + +
Sbjct: 507 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAVIKEWGTGRDTLRCLALAT 566
Query: 367 TDT 375
DT
Sbjct: 567 RDT 569
>U96781-1|AAB53113.1| 1001|Homo sapiens Ca2+ ATPase of fast-twitch
skeletal muscle sacroplasmic reticulum, adult isofor
protein.
Length = 1001
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 AIGKKSFPGQNEGGVFSSANISAVKTAQLPLHSLVSSKVLDLILLAQSGKDLSKEIKHES 366
A+G K F GV N V T ++PL V K++ +I +G+D + + +
Sbjct: 507 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAVIKEWGTGRDTLRCLALAT 566
Query: 367 TDT 375
DT
Sbjct: 567 RDT 569
>BX537784-1|CAD97841.1| 994|Homo sapiens hypothetical protein
protein.
Length = 994
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 AIGKKSFPGQNEGGVFSSANISAVKTAQLPLHSLVSSKVLDLILLAQSGKDLSKEIKHES 366
A+G K F GV N V T ++PL V K++ +I +G+D + + +
Sbjct: 507 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAVIKEWGTGRDTLRCLALAT 566
Query: 367 TDT 375
DT
Sbjct: 567 RDT 569
>BC037354-1|AAH37354.1| 844|Homo sapiens Similar to ATPase, Ca++
transporting, cardiac muscle, fast twitch 1 protein.
Length = 844
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 AIGKKSFPGQNEGGVFSSANISAVKTAQLPLHSLVSSKVLDLILLAQSGKDLSKEIKHES 366
A+G K F GV N V T ++PL V K++ +I +G+D + + +
Sbjct: 544 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMAVIKEWGTGRDTLRCLALAT 603
Query: 367 TDT 375
DT
Sbjct: 604 RDT 606
>AY358195-1|AAQ88562.1| 200|Homo sapiens RGSF9380 protein.
Length = 200
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 TMDDDDYWNTSETKDKAFNFDDDLLSPQEIL-AIGKKSFPGQNEGGVFSSANISAVKTAQ 270
++D DD+W T + F + D+LS E++ I K G V + A+ AV
Sbjct: 131 SLDSDDFW-TIPPLTQPFMLEKDILSSYEVVHRILKGKITGALNSAVTAPASNLAVVPPL 189
Query: 271 LPLHSL 288
LPL L
Sbjct: 190 LPLGCL 195
>AL592078-7|CAI16188.1| 200|Homo sapiens tudor domain containing 10
protein.
Length = 200
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 TMDDDDYWNTSETKDKAFNFDDDLLSPQEIL-AIGKKSFPGQNEGGVFSSANISAVKTAQ 270
++D DD+W T + F + D+LS E++ I K G V + A+ AV
Sbjct: 131 SLDSDDFW-TIPPLTQPFMLEKDILSSYEVVHRILKGKITGALNSAVTAPASNLAVVPPL 189
Query: 271 LPLHSL 288
LPL L
Sbjct: 190 LPLGCL 195
>AL592078-1|CAI16182.1| 252|Homo sapiens tudor domain containing 10
protein.
Length = 252
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 TMDDDDYWNTSETKDKAFNFDDDLLSPQEIL-AIGKKSFPGQNEGGVFSSANISAVKTAQ 270
++D DD+W T + F + D+LS E++ I K G V + A+ AV
Sbjct: 183 SLDSDDFW-TIPPLTQPFMLEKDILSSYEVVHRILKGKITGALNSAVTAPASNLAVVPPL 241
Query: 271 LPLHSL 288
LPL L
Sbjct: 242 LPLGCL 247
>AL162591-1|CAH72850.1| 252|Homo sapiens tudor domain containing 10
protein.
Length = 252
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 94 TMDDDDYWNTSETKDKAFNFDDDLLSPQEIL-AIGKKSFPGQNEGGVFSSANISAVKTAQ 270
++D DD+W T + F + D+LS E++ I K G V + A+ AV
Sbjct: 183 SLDSDDFW-TIPPLTQPFMLEKDILSSYEVVHRILKGKITGALNSAVTAPASNLAVVPPL 241
Query: 271 LPLHSL 288
LPL L
Sbjct: 242 LPLGCL 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,568,797
Number of Sequences: 237096
Number of extensions: 1168114
Number of successful extensions: 2190
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2190
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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