Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J10
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 165 9e-41
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 165 9e-41
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 165 9e-41
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 164 2e-40
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 164 3e-40
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 164 3e-40
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 164 3e-40
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 164 3e-40
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 164 3e-40
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 164 3e-40
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 164 3e-40
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 164 3e-40
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 162 8e-40
BC130648-1|AAI30649.1| 215|Homo sapiens chromosome 20 open read... 32 1.9
BC130646-1|AAI30647.1| 215|Homo sapiens chromosome 20 open read... 32 1.9
BC127688-1|AAI27689.1| 215|Homo sapiens chromosome 20 open read... 32 1.9
AL079335-2|CAI42292.1| 215|Homo sapiens chromosome 20 open read... 32 1.9
CR533566-1|CAG38597.1| 552|Homo sapiens LOC56926 protein. 31 3.3
BC019091-1|AAH19091.2| 563|Homo sapiens nicalin homolog (zebraf... 31 3.3
BC013283-1|AAH13283.2| 563|Homo sapiens nicalin homolog (zebraf... 31 3.3
BC010064-1|AAH10064.2| 563|Homo sapiens nicalin homolog (zebraf... 31 3.3
BC008920-1|AAH08920.2| 350|Homo sapiens NCLN protein protein. 31 3.3
BC007275-1|AAH07275.1| 273|Homo sapiens NCLN protein protein. 31 3.3
AK172848-1|BAD18812.1| 563|Homo sapiens protein ( Homo sapiens ... 31 3.3
X82545-1|CAA57895.1| 65|Homo sapiens prion protein protein. 30 7.7
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 165 bits (402), Expect = 9e-41
Identities = 75/111 (67%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 165 bits (402), Expect = 9e-41
Identities = 75/111 (67%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 165 bits (402), Expect = 9e-41
Identities = 75/111 (67%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 164 bits (399), Expect = 2e-40
Identities = 77/112 (68%), Positives = 95/112 (84%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSEDDVQDGL---VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 293
+IQNL +FDPFADA K +D + GL +H+RIQQRNG KTLTTVQG++ +YD KK+V+
Sbjct: 3 TIQNLQSFDPFADATKG-DDLLPAGLEDYIHIRIQQRNGGKTLTTVQGIADDYDKKKLVK 61
Query: 294 ACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
A KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 62 AFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD +K+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKEKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 164 bits (398), Expect = 3e-40
Identities = 74/111 (66%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 162 bits (394), Expect = 8e-40
Identities = 74/111 (66%), Positives = 92/111 (82%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
+IQNL++FDPFADA K + + VH+RIQQRNGRKTLTTVQG++ +YD KK+V+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYVHIRIQQRNGRKTLTTVQGIADDYDKKKLVKP 62
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 449
KK+FACNGTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>BC130648-1|AAI30649.1| 215|Homo sapiens chromosome 20 open reading
frame 118 protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.9
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 360 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIP-RTSPAPWSMFYARSAAGFGRALDHLAR 184
AA P PQ ++ S R S H P R + PWS+ + S GF +L L R
Sbjct: 38 AAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGF--SLQSLYR 95
Query: 183 R 181
R
Sbjct: 96 R 96
>BC130646-1|AAI30647.1| 215|Homo sapiens chromosome 20 open reading
frame 118 protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.9
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 360 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIP-RTSPAPWSMFYARSAAGFGRALDHLAR 184
AA P PQ ++ S R S H P R + PWS+ + S GF +L L R
Sbjct: 38 AAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGF--SLQSLYR 95
Query: 183 R 181
R
Sbjct: 96 R 96
>BC127688-1|AAI27689.1| 215|Homo sapiens chromosome 20 open reading
frame 118 protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.9
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 360 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIP-RTSPAPWSMFYARSAAGFGRALDHLAR 184
AA P PQ ++ S R S H P R + PWS+ + S GF +L L R
Sbjct: 38 AAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGF--SLQSLYR 95
Query: 183 R 181
R
Sbjct: 96 R 96
>AL079335-2|CAI42292.1| 215|Homo sapiens chromosome 20 open reading
frame 118 protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.9
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 360 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIP-RTSPAPWSMFYARSAAGFGRALDHLAR 184
AA P PQ ++ S R S H P R + PWS+ + S GF +L L R
Sbjct: 38 AAAPEDPTVPQLTEASQVLSASEIRQLSFHFPPRVTGHPWSLVFCTSRDGF--SLQSLYR 95
Query: 183 R 181
R
Sbjct: 96 R 96
>CR533566-1|CAG38597.1| 552|Homo sapiens LOC56926 protein.
Length = 552
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 363 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 418
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 419 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 449
>BC019091-1|AAH19091.2| 563|Homo sapiens nicalin homolog
(zebrafish) protein.
Length = 563
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 374 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 429
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 430 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 460
>BC013283-1|AAH13283.2| 563|Homo sapiens nicalin homolog
(zebrafish) protein.
Length = 563
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 374 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 429
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 430 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 460
>BC010064-1|AAH10064.2| 563|Homo sapiens nicalin homolog
(zebrafish) protein.
Length = 563
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 374 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 429
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 430 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 460
>BC008920-1|AAH08920.2| 350|Homo sapiens NCLN protein protein.
Length = 350
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 161 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 216
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 217 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 247
>BC007275-1|AAH07275.1| 273|Homo sapiens NCLN protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 84 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 139
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 140 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 170
>AK172848-1|BAD18812.1| 563|Homo sapiens protein ( Homo sapiens
cDNA FLJ24009 fis, clone KAT07785. ).
Length = 563
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +3
Query: 117 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 296
R +I+ L F ++S D + ++ VR R KTLT + +E + I
Sbjct: 374 RFAIRRLPAFT--LSHLESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNL 429
Query: 297 CKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLT 404
+K GT + P + E +Q+Q +Q +++ WLT
Sbjct: 430 TEK-----GTPPDMPVFTEQMQIQQEQLDSVMDWLT 460
>X82545-1|CAA57895.1| 65|Homo sapiens prion protein protein.
Length = 65
Score = 29.9 bits (64), Expect = 7.7
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -3
Query: 429 ARASQGPI**ATDKCSRAGRLAVAAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSP 253
ARA+ GP D RA L APR +P AP+ +C P++S ++ PR SP
Sbjct: 1 ARAAIGP---RADLRPRAPPLPFPAPRPSPSAPR-------VACPPSQSLTAAAPRASP 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,677,652
Number of Sequences: 237096
Number of extensions: 2000382
Number of successful extensions: 5690
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5676
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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