BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J09 (416 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_44146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.88 SB_54844| Best HMM Match : Microvir_J (HMM E-Value=1.7) 29 1.2 SB_44479| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5 SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5 SB_29132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7 SB_5699| Best HMM Match : DUF689 (HMM E-Value=3.8e-10) 28 3.6 SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6 SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 27 4.7 SB_17991| Best HMM Match : GRP (HMM E-Value=7.5) 27 6.2 SB_1658| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.16) 27 6.2 SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2 SB_42978| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2 SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) 27 8.2 SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18) 27 8.2 >SB_44146| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 310 Score = 29.9 bits (64), Expect = 0.88 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -2 Query: 208 KQSVCLILWHASCGS--RRYLVHHS*GVARRYHRGLRSK 98 + + L+LW + GS RR+++HH G + H+ L K Sbjct: 37 RPKIALLLWVLNRGSKDRRFVIHHGQGNHKSNHKNLHKK 75 >SB_54844| Best HMM Match : Microvir_J (HMM E-Value=1.7) Length = 189 Score = 29.5 bits (63), Expect = 1.2 Identities = 15/60 (25%), Positives = 34/60 (56%) Frame = +3 Query: 159 RRDPQDACQRIRQTDCFLPLDSS*GLRRRRCVQGHHCQELRRLLGRNRISPRKGSKSLNH 338 R++ ++ QR+++T + + GL RR+C+Q QE+R + S + +++++H Sbjct: 31 RKEAENELQRLKKT---VNNTTHLGLERRKCLQSFKSQEIRVFGSKGANSSKDETENIDH 87 >SB_44479| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 197 Score = 29.1 bits (62), Expect = 1.5 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +1 Query: 154 NNAVTHKMHAKELDRQTVSYPWT-APKDLEGDVVFKVTIVKS 276 ++AVT K+ K DR+ +S PW P D+ V V S Sbjct: 100 DSAVTVKVRVKVRDREIISIPWVPEPPDISRPVTLSQNAVTS 141 >SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 875 Score = 29.1 bits (62), Expect = 1.5 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -2 Query: 106 RSKCRRSC-HPDELPGGCRPFC 44 R++C R C +P+ +PG C P C Sbjct: 250 RTECSRDCPNPEPIPGQCCPIC 271 >SB_29132| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 450 Score = 28.3 bits (60), Expect = 2.7 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = -3 Query: 162 GVIWFTTVE-GLREGIIGAYGPSADDLVTLTSFQEDA 55 GV WF ++ +R I GA GP+ + T EDA Sbjct: 285 GVSWFALLKVNIRSSIAGAGGPAMEAQTEFTKLLEDA 321 >SB_5699| Best HMM Match : DUF689 (HMM E-Value=3.8e-10) Length = 333 Score = 27.9 bits (59), Expect = 3.6 Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Frame = +3 Query: 168 PQDA-CQRIRQTDCFLPLDSS*GLRRRRCVQGHHCQELRRLLGRNRISPRKGSKSLNHVS 344 P D C R+R +P S R HH + LR R R P K K LN VS Sbjct: 257 PTDVDCGRVRGLAAVIPSLSIGNFRISILGIEHHKRRLRPCDKRKRAGPNKNVKQLNGVS 316 >SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 879 Score = 27.9 bits (59), Expect = 3.6 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = +1 Query: 280 AVFWVGIESAPVKVLSH*IMSVIITYLMST---LICITNIKNIQ 402 AV++V +E P+K + +S+ I + LIC+T+ KN+Q Sbjct: 260 AVYYVDMEKYPLKCIKSPAVSITIETNKTPPPDLICVTSSKNLQ 303 >SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) Length = 717 Score = 27.5 bits (58), Expect = 4.7 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Frame = +1 Query: 46 KMAGILL-EARQGDKIVGTWTV---SPDD-TFSQPLNCGEPNNAVT 168 K+ GI L ++G K+V +WTV +P F+ P G+P+ +T Sbjct: 625 KVKGIFLWHVKKGGKVVSSWTVDLKTPGGAVFTGPPKGGKPDTTIT 670 >SB_17991| Best HMM Match : GRP (HMM E-Value=7.5) Length = 186 Score = 27.1 bits (57), Expect = 6.2 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 Query: 82 DKIVGTWTVSPDDTFSQPLNCGEPNNAVTHKMHAKELDRQTVSYP 216 D + T + S D T+ N G P + VT + LDR T +YP Sbjct: 85 DLVTNTTSASSDVTYK---NHGSPYDEVTATSTYQSLDRTTRTYP 126 >SB_1658| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.16) Length = 458 Score = 27.1 bits (57), Expect = 6.2 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = +1 Query: 40 EDKMAGILLEARQGDKIVGTWTVSPDDTFSQPLNC-GEPNNAVTHKMHAKELDRQTVSYP 216 +DK+ L E +QGD+ +G T + D Q + E N ++M + D Q Sbjct: 257 KDKVISTLREGKQGDESMGAVTSAEFDEVCQERDALKEELNQTRYRMEQVKTDLQDAEQH 316 Query: 217 WTAPKDLEGDVV 252 A D+ + V Sbjct: 317 QQAEADIAQEKV 328 >SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4538 Score = 26.6 bits (56), Expect = 8.2 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = -3 Query: 150 FTTVEGLREGII-GAYGPSADDLVT-LTSFQEDAGHFVFGCFAAD 22 F T+ +++ I A+ + L+T T+F A H+ F CF AD Sbjct: 2271 FGTIANVQKKISEAAFTDDSPTLITNATTFTIRASHYEFSCFVAD 2315 >SB_42978| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 110 Score = 26.6 bits (56), Expect = 8.2 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 82 DKIVGTWTVSPDDTFSQPLNCGEPNNAVTHKMHAKELDRQTVSYP 216 D + T + S D T++ N G P + VT + LDR T +YP Sbjct: 9 DPVTHTTSASSDVTYA---NHGSPYDDVTATSTYQSLDRTTRTYP 50 >SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) Length = 519 Score = 26.6 bits (56), Expect = 8.2 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 Query: 82 DKIVGTWTVSPDDTFSQPLNCGEPNNAVTHKMHAKELDRQTVSYP 216 D + T + S D T+ N G P + VT + LDR T +YP Sbjct: 179 DFVTNTTSASSDVTYK---NHGSPYDEVTATSTYQSLDRTTRTYP 220 >SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18) Length = 214 Score = 26.6 bits (56), Expect = 8.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 118 HRGLRSKCRRSCHPDELPGGCRPFCLRVFCR 26 +R + SK R +C D G P C R++CR Sbjct: 125 YRVIGSKTR-TCQADTTWSGINPSCERIYCR 154 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,263,463 Number of Sequences: 59808 Number of extensions: 322649 Number of successful extensions: 1102 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1101 length of database: 16,821,457 effective HSP length: 75 effective length of database: 12,335,857 effective search space used: 777158991 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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