Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J09
(416 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 1.4
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 2.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 3.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 3.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 3.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 3.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 20 9.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 20 9.7
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 20 9.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 20 9.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 9.7
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 1.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 265 IVKSYAVFWVGIESAPVKV 321
++ S+ FW+ E+AP +V
Sbjct: 259 VIMSWVSFWIKPEAAPARV 277
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 5 IPLTWLSAAKHPKTKWP 55
IP+T + KH KTK P
Sbjct: 210 IPVTLTTVPKHSKTKSP 226
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 265 IVKSYAVFWVGIESAPVKVLSH*IMSVIITYLMSTLICITN 387
++ S+ FW+ + P +V + V M+TL+ TN
Sbjct: 235 VIISWVSFWLNRNATPARV----ALGVTTVLTMTTLMSSTN 271
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 265 IVKSYAVFWVGIESAPVKVLSH*IMSVIITYLMSTLICITN 387
++ S+ FW+ + P +V + V M+TL+ TN
Sbjct: 235 VIISWVSFWLNRNATPARV----ALGVTTVLTMTTLMSSTN 271
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 315 KGSKSLNHVSHHHLLDVNINLYY 383
K ++S+NH+ HH D ++ Y
Sbjct: 756 KKARSVNHLLTHHEYDYELSRGY 778
Score = 20.6 bits (41), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 13 DVVISGKTPEDKMAGILLEARQGDKIVGTWTVS 111
D+ ISGK + +M L+ D+ V TW V+
Sbjct: 99 DLPISGKPFQIRMKHGLIRDLIVDRDVPTWEVN 131
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 265 IVKSYAVFWVGIESAPVKVLSH*IMSVIITYLMSTLICITN 387
++ S+ FW+ + P +V + V M+TL+ TN
Sbjct: 174 VIISWVSFWLNRNATPARV----ALGVTTVLTMTTLMSSTN 210
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 160 AVTHKMHAKELDRQTVSYPWTAPKDLEGDVVF 255
AVT + + ++RQ+ P+T + D+ +
Sbjct: 549 AVTLRPGSNSIERQSSESPFTTSTIMPSDIFY 580
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 166 THKMHAKELDRQTVSYP 216
++KMH K ++ + YP
Sbjct: 431 SYKMHQKPYNKDEIIYP 447
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 166 THKMHAKELDRQTVSYP 216
++KMH K ++ + YP
Sbjct: 431 SYKMHQKPYNKDEIIYP 447
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 160 AVTHKMHAKELDRQTVSYPWTAPKDLEGDVVF 255
AVT + + ++RQ+ P+T + D+ +
Sbjct: 549 AVTLRPGSNSIERQSSESPFTTSTIMPSDIFY 580
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 97 CRRSCHPDELPGGCR 53
CR+ PDE CR
Sbjct: 629 CRQGTVPDETHSACR 643
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,214
Number of Sequences: 438
Number of extensions: 2444
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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