BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J08 (654 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_08_0033 + 27820563-27823482,27823593-27823996 30 1.9 11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257 28 5.6 08_01_0914 + 9010613-9013316,9013537-9013748 28 5.6 12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031... 27 9.9 >11_08_0033 + 27820563-27823482,27823593-27823996 Length = 1107 Score = 29.9 bits (64), Expect = 1.9 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 56 GVTENVSLQDKRCRRSVCGAPEKGFIPFP 142 GV N++L+ R +CG+P G +P P Sbjct: 709 GVFSNITLKSLRGNAGLCGSPRLGLLPCP 737 >11_04_0315 + 16306053-16306753,16306779-16308479,16308894-16309257 Length = 921 Score = 28.3 bits (60), Expect = 5.6 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +2 Query: 356 YAKDFETFYKSAAFARVHLNEGQFLYAYYIAV 451 Y KD FY + + + EG+FL ++Y+ + Sbjct: 697 YVKDSRLFYSFSESTKELVQEGEFLQSFYVQI 728 >08_01_0914 + 9010613-9013316,9013537-9013748 Length = 971 Score = 28.3 bits (60), Expect = 5.6 Identities = 14/44 (31%), Positives = 26/44 (59%) Frame = -3 Query: 631 IHILLFLFYNSIINSLCIVNHTVLHFSAINLK*SVHINEELWIN 500 +H+L+F ++I+S+C + T F +K +V NE L++N Sbjct: 656 LHVLIFCIVGTLISSMCCM--TAYCFIKRKMKLNVVDNENLFLN 697 >12_02_1069 + 25801309-25801433,25802429-25802620,25803130-25803159, 25803426-25803500,25803599-25804373,25804549-25804614, 25804746-25804811,25804898-25805140,25805407-25805502 Length = 555 Score = 27.5 bits (58), Expect = 9.9 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +3 Query: 381 TRVPLSL-VCT*MRDSSCTHIILQLSSAMILMDSFYQLLMK 500 T+ P S V T + S+CTH QLSSA +L + +K Sbjct: 65 TQCPCSFAVATSISSSTCTHFTPQLSSAHLLSSQLKEKELK 105 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,085,022 Number of Sequences: 37544 Number of extensions: 336889 Number of successful extensions: 749 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 749 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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