Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J08
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z35663-8|CAA84728.1|  249|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    29   3.8  
AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z79756-5|CAB02115.1|  388|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 22/114 (19%), Positives = 45/114 (39%)
 Frame = +3

Query: 192 DYDVEANIDNYTNKKAVEEFLKLYRIGDLXXXXXXXXXXXXXXGKRLLLFSTCSTMLKTL 371
           D+D +  +D        E  +K++  G +                 L L  T      T 
Sbjct: 200 DFDGKVLLDGLIPNHTYE--IKIFVTGGIVQGTPSNLATFTTNSTALALVKTEPDEEYTA 257

Query: 372 KPSTRVPLSLVCT*MRDSSCTHIILQLSSAMILMDSFYQLLMKFIHNSSLIWTL 533
            P T  PLS+ CT ++  S   ++ +++   + +DS +  ++  +H   +  T+
Sbjct: 258 DPQTNEPLSITCT-VKSVSKASVLWKVNGIKVSVDSSFYTVVTSVHEDFIESTI 310


>Z35663-8|CAA84728.1|  249|Caenorhabditis elegans Hypothetical
           protein T04A8.9 protein.
          Length = 249

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 123 KVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEF 251
           KVL L Q   Q ++   YYK+ K +  + N  N   ++A ++F
Sbjct: 27  KVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTN--KEEAAKKF 67


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 327 RLLLFSTCSTMLKTLKPSTRVPLSLV 404
           R+  F TCS  +KT+K    +PLS+V
Sbjct: 290 RIEQFLTCSETIKTVKSDALIPLSIV 315


>AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical
           protein T06D4.4 protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 24  AGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLS---LFQDVDQVNVD 167
           +GL+  +QS ++   +  F  K++DA+  +  K+ L+   +F  +D V  D
Sbjct: 297 SGLVRRIQSGILITNSSSFFGKNLDAIIQQTHKRTLANYLIFHFIDAVTFD 347


>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 302 IFYQKLREEAIALFHLFYYAKDFETFYKSA-AFARVHLNEGQFLYAYYIA 448
           +FY       IA F  + Y K  +T YKSA AF R  L  G+FL AY +A
Sbjct: 101 VFYGWATATEIAYF-AYIYVKVPKTEYKSATAFTRAALLVGRFL-AYALA 148


>Z79756-5|CAB02115.1|  388|Caenorhabditis elegans Hypothetical
           protein F53C11.8 protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 473 GFVLPAPYEVYPQFFVNMDTLLKIYRTKMQDGMVH-DAKAIN 595
           GF+ P P  VYP         L+++R  + DG VH DA  IN
Sbjct: 120 GFI-PDPDNVYPDLIATTSDCLRLWR--VVDGKVHPDAVMIN 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,020,232
Number of Sequences: 27780
Number of extensions: 303649
Number of successful extensions: 791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)