Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J07
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.93 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.6  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       24   3.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.8  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   3.8  
AY745226-1|AAU93493.1|   86|Anopheles gambiae cytochrome P450 pr...    23   8.7  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.7  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       23   8.7  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       23   8.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = -1

Query: 335  F*LEEPFHYEA*RVIVESIIAVQYNSIFYTVLDYFRDYHFCNLDSTYNMETGDK 174
            F  ++ F+YE+ +   +S+  + Y+     V  Y + +H  +  +TY  +T D+
Sbjct: 1787 FPTQDGFYYESEQYPDQSVYVLVYDKRKLKVASYVKTHHGDHHLTTYMYDTNDR 1840


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -1

Query: 335  F*LEEPFHYEA*RVIVESIIAVQYNSIFYTVLDYFRDYHFCNLDSTYNMETGDK 174
            F  ++ F+YE+ +    S+  + Y+     V  Y + +H  +  +TY  +T D+
Sbjct: 1788 FPTQDGFYYESEQYPRRSVYVLVYDKRKLKVASYVKTHHGDHHLTTYMYDTNDR 1841


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 213 TKMVVPEIIQYGVEDAVILDCDYTFNNDT 299
           +K   P+I++Y  +D +  D D  F++D+
Sbjct: 80  SKKTNPQIVEYEFDDDLPFDDDSDFDDDS 108


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 236  YFRDYHFCNLDSTYNMETGDKQKDCA*MRQRH 141
            Y +D HF N D  YN + G  + +   +  RH
Sbjct: 1697 YGQDSHFMNSDYEYNWKNGFGEDEQITILARH 1728


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 512 SGHYTSIITRDISVRFNNA 456
           SG Y +++T D++  FN+A
Sbjct: 539 SGRYCAVVTLDVTNAFNSA 557


>AY745226-1|AAU93493.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 463 IMRKALCIFRGSLDALYVRSTRPLSIPI 380
           IMRK     +G   ++YVR   P+ IP+
Sbjct: 12  IMRKGFRDEQGHDMSIYVREGTPILIPV 39


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 213 TKMVVPEIIQYGVEDAVILDCDYTFNND 296
           +K   P+I++Y  +D    D D  F++D
Sbjct: 310 SKKTNPQIVEYEFDDDFPFDDDSDFDDD 337


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 213 TKMVVPEIIQYGVEDAVILDCDYTFNND 296
           +K   P+I++Y  +D    D D  F++D
Sbjct: 80  SKKTNPQIVEYEFDDDFPFDDDSDFDDD 107


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 213 TKMVVPEIIQYGVEDAVILDCDYTFNND 296
           +K   P+I++Y  +D    D D  F++D
Sbjct: 80  SKKTNPQIVEYEFDDDFPFDDDSDFDDD 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,899
Number of Sequences: 2352
Number of extensions: 12319
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)