Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J07
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-2|AAB00692.1|  362|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z99171-7|CAB16312.1|  188|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AL032660-1|CAA21752.1|  711|Caenorhabditis elegans Hypothetical ...    29   2.9  
U00049-3|AAC47059.1|  339|Caenorhabditis elegans Serpentine rece...    28   3.8  
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p...    27   6.7  
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U28730-1|AAA68261.1|  113|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>U58755-2|AAB00692.1|  362|Caenorhabditis elegans Hypothetical
           protein C34D4.10 protein.
          Length = 362

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 354 WIVGQKPQDIGILRGRVDLTYRASSDPLKMHRAL 455
           W VG +  DIGI+R R D     S DPL  + AL
Sbjct: 210 WPVGVETCDIGIMRSRTDFKPLGSLDPLLDYPAL 243


>Z99171-7|CAB16312.1|  188|Caenorhabditis elegans Hypothetical
           protein F47G4.8 protein.
          Length = 188

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 282 TFNNDTSGLVVKWFFKSKSRLVYQWIVGQKPQD 380
           T    T GL+ +W + S+ + ++ W++G +  D
Sbjct: 131 TLRMGTRGLLTRWSYNSRKKAIFGWMMGPQVTD 163


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 351 QWIVGQKPQDIGILRGRV-DLTYRASSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDED 527
           +WI+GQK   IGI      D      +DPL  HR +  +  NT  +    C    ++D +
Sbjct: 322 KWILGQKFAGIGISHALFDDPRGDCGTDPLPAHRLVMELIRNTIPANPAKCTRLCYLDPE 381


>AL032660-1|CAA21752.1|  711|Caenorhabditis elegans Hypothetical
           protein Y70G10A.2 protein.
          Length = 711

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 372 PQDIGILRGRVDLTYRASSDPL 437
           P+DIG L GR++L   A+ DPL
Sbjct: 614 PRDIGKLNGRLELVTLAAEDPL 635


>U00049-3|AAC47059.1|  339|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 7 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 81  RSIVLWYGDSYEMVRRRVDRVSLTHLCTILLLVTCFHVI 197
           + +V WYG  + +  RRV  VSL+ L    + V+   ++
Sbjct: 175 KEVVFWYGGFFVIYHRRVGWVSLSKLHLTFIFVSISFIL 213


>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
           protein AH6.1 protein.
          Length = 1137

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +3

Query: 189 HVIRGVKITKMVVPEIIQYGVEDAVILDCDYTFNNDTSGLVVKWFFKSKSRLVYQWIVGQ 368
           HV+    +T+M + ++     +   +   D+T+ N      V  F+K +   V+ +    
Sbjct: 411 HVVISPNLTRMPIFQLYGLNSDYDQVALVDFTYTNSVMVPNVTLFYKDEGGAVWSYYGHS 470

Query: 369 KPQDIGI 389
           +P DI I
Sbjct: 471 RPLDIPI 477


>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
           protein AH6.1 protein.
          Length = 1137

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +3

Query: 189 HVIRGVKITKMVVPEIIQYGVEDAVILDCDYTFNNDTSGLVVKWFFKSKSRLVYQWIVGQ 368
           HV+    +T+M + ++     +   +   D+T+ N      V  F+K +   V+ +    
Sbjct: 411 HVVISPNLTRMPIFQLYGLNSDYDQVALVDFTYTNSVMVPNVTLFYKDEGGAVWSYYGHS 470

Query: 369 KPQDIGI 389
           +P DI I
Sbjct: 471 RPLDIPI 477


>U28730-1|AAA68261.1|  113|Caenorhabditis elegans Hypothetical
           protein K10B2.4 protein.
          Length = 113

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 88  SFCGMVIHMRWCEGGLTVC 144
           S CG++I M+WC     VC
Sbjct: 46  SMCGLMIRMKWCSWLALVC 64


>U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical
           protein F42A10.1 protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +3

Query: 396 GRVDLTYRASSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQM 545
           G+  L    SS  LK+   + ++    ++ GD T V+   +  D+K + +
Sbjct: 216 GKTTLLKMISSQQLKIPAGISMLSVEQEVEGDDTLVLDAVLMSDTKRQTL 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,815,470
Number of Sequences: 27780
Number of extensions: 267183
Number of successful extensions: 762
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)