BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J06 (644 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_04_0234 + 15187065-15188241,15188316-15188494 36 0.036 04_03_0649 - 18402976-18403220,18403305-18404499 35 0.048 03_02_0517 + 9054816-9055655 29 3.2 08_01_0914 + 9010613-9013316,9013537-9013748 28 5.5 05_03_0086 + 8279518-8280320,8280923-8281844 28 7.3 04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 27 9.7 02_05_1001 + 33423562-33424098 27 9.7 >11_04_0234 + 15187065-15188241,15188316-15188494 Length = 451 Score = 35.5 bits (78), Expect = 0.036 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +3 Query: 396 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 500 ++ + R AF NS++ LA GFDG+DL+W+ Sbjct: 129 FSRMASEKNLRRAFINSSIELARANGFDGLDLAWR 163 >04_03_0649 - 18402976-18403220,18403305-18404499 Length = 479 Score = 35.1 bits (77), Expect = 0.048 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +3 Query: 384 DPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 500 DP + + P +R AF +A+ +A + GFDG+D++W+ Sbjct: 131 DPA-FAAMAADPASRAAFIGAAVKVARENGFDGLDVAWR 168 >03_02_0517 + 9054816-9055655 Length = 279 Score = 29.1 bits (62), Expect = 3.2 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 148 ENLKHVCCLRTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWTL 282 +++ H C+ W L S P+C LPA+ + + IW L Sbjct: 154 KHVYHQDCILPWLSLRNSCPVCRRELPAAAAPESEADAGLTIWRL 198 >08_01_0914 + 9010613-9013316,9013537-9013748 Length = 971 Score = 28.3 bits (60), Expect = 5.5 Identities = 16/59 (27%), Positives = 24/59 (40%) Frame = +3 Query: 399 NLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLXXXXXXXXXXXXGSFWHSIKKTFG 575 NL + P++ + T + E+ G DLSW SF +I +TFG Sbjct: 165 NLTCDIPKSLSNLTTLTKFIVERNFIHGQDLSWMGNLTTLTHFVLEGNSFTGNIPETFG 223 >05_03_0086 + 8279518-8280320,8280923-8281844 Length = 574 Score = 27.9 bits (59), Expect = 7.3 Identities = 19/69 (27%), Positives = 26/69 (37%) Frame = +3 Query: 402 LLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLXXXXXXXXXXXXGSFWHSIKKTFGTX 581 LL++ P R AFT A + + FDG+ +W L F T Sbjct: 478 LLVKEPHKRIAFTRGATEIKQHPFFDGV--NWALVRSLTPPSVPEPVDFRQYAAAASATT 535 Query: 582 PVDDKESEH 608 P D K E+ Sbjct: 536 PKDKKPPEN 544 >04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556, 34897176-34897352,34897426-34897492,34898043-34898101, 34898188-34898241,34898455-34898604,34898709-34898918, 34898980-34899039,34899399-34899527,34899616-34899720, 34899935-34900024,34900630-34900695,34901047-34901115, 34901348-34901467,34901572-34901634,34901681-34901817, 34902070-34902160,34902298-34902463,34902700-34904172, 34905666-34905940,34906322-34906819,34906996-34907145, 34907840-34907911,34908006-34908266,34908478-34908558, 34908745-34908996,34909323-34909382,34909602-34909853, 34910385-34910549,34910589-34910849,34911267-34912307, 34913398-34913457,34914055-34914165,34914448-34914534, 34915227-34915300,34915397-34915490,34915644-34915689, 34916397-34916521 Length = 2501 Score = 27.5 bits (58), Expect = 9.7 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 Query: 273 LDIDRAHANYRAITNLKRQFPQLRVFL 353 + +D ANYRA+ L + FP ++ F+ Sbjct: 2373 ITLDTPGANYRAVWALSKYFPNVKTFV 2399 >02_05_1001 + 33423562-33424098 Length = 178 Score = 27.5 bits (58), Expect = 9.7 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = -2 Query: 292 CARSMSKFSLSETILYVSA--WMPADLYSRWVQNERA 188 CA S E + + S W PAD+ + WV ERA Sbjct: 80 CALVHSHGPYGENLFHGSGVGWAPADVVAAWVSRERA 116 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,034,355 Number of Sequences: 37544 Number of extensions: 275466 Number of successful extensions: 708 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 693 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 708 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1596695220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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